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Query: IDP05689 putative cellsurface protein [Listeria monocytogenes EGD-e] lmo1654 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKILSLLVAFVCLWSILLPGQEADAAAKINSWDLVDSSKHLDYSGNSKYMSFIQSGANTWNAYKKGVIRPASGANKSDVYCSDISANNNINATTYSNGKITFNKKNMDKKNNAGKQNVATHELGHGLRLGHNASSDVMYQYSTSKTTLSTNDKQSYDAAYKKYLast
1 -6.510sp|Q5XUX0|FBX31_HUMAN F-box only protein 31 OS=Homo sapiens GN=FBXO31 PE=1 SV=2  ali   13  1......................................................................................................LRKLEITGVSCRDVYAKLLHRYRHILGLDIGPYGGLLN........................ 41
2 -6.350sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1  ali   10  3.RMKTVSVALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLR-------------------------RNAKEERVLFHYNGH--GVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMG.. 136
3 -6.350tr|F5H7J5|F5H7J5_HUMAN Uncharacterized protein OS=Homo sapiens GN=RPTOR PE=4 SV=1  ali   10  3.RMKTVSVALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLR-------------------------RNAKEERVLFHYNGH--GVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMG.. 136
4 -5.720sp|Q96D46|NMD3_HUMAN 60S ribosomal export protein NMD3 OS=Homo sapiens GN=NMD3 PE=1 SV=1  ali   14  32......................................TSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVMECSIVQDIKRAAGAGMISKKHTLGEVWVSEMNTDKQYFCRTH-LGHLLNPGDLANCNLNDEHVNKMNSDRVPDVVLIKKSY... 162
5 -5.510sp|Q9UHV7|MED13_HUMAN Mediator of RNA polymerase II transcription subunit 13 OS=Homo sapiens GN=MED13 PE=1 SV=3  ali   11  149........................................TFLLGYDYDYLVLSPFALPYWERLM---LEPYGSQRDIAYVV------------------LCPENEALLNGAKSFFRDLAIYELGHRMRVGSTASKKLSEKLVAEWFSQAADGNNEAFSKLKLY 266
6 -5.440tr|F8WDS8|F8WDS8_HUMAN Uncharacterized protein OS=Homo sapiens GN=TSSC1 PE=4 SV=1  ali   13  1....................................................................................................................KNVLLHQAGEIWHISASPDRGVLTTCYNRMSCGSQWEMGRKSFPWL.. 47
7 -5.390sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by LINC00269 OS=Homo sapiens GN=LINC00269 PE=5 SV=1  ali   14  142...............................................................................................................TSGDPPASASQSAG-ITGVSHSARPKSCF........................ 169
8 -5.130sp|Q3B7T1|EDRF1_HUMAN Erythroid differentiation-related factor 1 OS=Homo sapiens GN=EDRF1 PE=1 SV=1  ali   18  34................................................................................................................SKSHVSMAVHRIGRTLLLDELDIQELF......................... 60
9 -5.000tr|C9J0U9|C9J0U9_HUMAN Uncharacterized protein OS=Homo sapiens GN=TSSC1 PE=4 SV=1  ali   11  1....................................................................................................................KNVLLHQAGEIWHISASPADRGVL--TTCYNRRDIIESFGILPVAQ.. 44
10 -4.840sp|Q86XT9|TM219_HUMAN Transmembrane protein 219 OS=Homo sapiens GN=TMEM219 PE=2 SV=1  ali   7  10.......................................................DIPQDWVSF----------RSFGQLTLCPRNGTVTGKWRGSHVVGLLTTLNFGDGPDRNKTRTFQATVLGSQMGLKGSSAGQLVLITARVTTERTAGTCLYFSA..... 104
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.