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Query: IDP06256 gene: glyQ; glycyl-tRNA synthetase subunit alpha [Streptococcus pneumoniae TIGR4] NP_345929 [Streptococcus pneumoniae TIGR4], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKKLTFQEIILTLQQFWNDQDCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSVYDIEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYVLKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRAKLLAEDAELast
1 -5.830sp|Q8N2R0|OSR2_HUMAN Protein odd-skipped-related 2 OS=Homo sapiens GN=OSR2 PE=2 SV=2  ali   11  15........................................................................................................................................SLQLTNYSFLQAVNTFPATVDHLQGLYGLSAVQTM---------------------------HMNHWTLGYPNVHEITRSTITEMAAAQGLVDARFPFPALPFTTHLFHPKQGAIAHVLPALHKDR........................................... 113
2 -5.710sp|Q14699|RFTN1_HUMAN Raftlin OS=Homo sapiens GN=RFTN1 PE=1 SV=4  ali   12  2................................................................................FTLFNKPKSHQKCRQYYPVTIPLHVSKNGQTVSGLDANW-------LEHMSDHFRKGGMLVN-AVFYLGIVNDSLHGLTDGVFIFEAVSTEDSKTIQGYDAIVVE........................................................................................................................ 98
3 -5.230sp|Q8TAX0|OSR1_HUMAN Protein odd-skipped-related 1 OS=Homo sapiens GN=OSR1 PE=2 SV=1  ali   14  15........................................................................................................................................SLQLTNYSFLQAVNGLPVPSDHLPNLYGFSALHAV---------------------------HLHQWTLGYPAMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL---------------------KTKPRFDFANLALAATQEDPAKLGR 136
4 -4.940sp|Q5T011|SZT2_HUMAN Protein SZT2 OS=Homo sapiens GN=SZT2 PE=2 SV=3  ali   18  1............................................................................................................DSELNLVTEVWVEPQYGRVGPGPG---IWKHLQDLTYSEIPQALPRDAACIGSMLSFEYLI........................................................................................................................................ 59
5 -4.930sp|Q5H8A4|PIGG_HUMAN GPI ethanolamine phosphate transferase 2 OS=Homo sapiens GN=PIGG PE=1 SV=1  ali   14  40...........................................................................................................................................FGQAFFYFQGNSNNIATVDISAGFGLDTYVEIPA.................................................................................................................................... 74
6 -4.720sp|Q7Z570|Z804A_HUMAN Zinc finger protein 804A OS=Homo sapiens GN=ZNF804A PE=1 SV=3  ali   6  30..GPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPPHALFPSLLSPHPTVIPLQPLF.................................................................................................................................................................................................................................................... 90
7 -4.670sp|O60303|K0556_HUMAN Uncharacterized protein KIAA0556 OS=Homo sapiens GN=KIAA0556 PE=1 SV=4  ali   12  46...................................................................................................................EHMWLIPFSPGLDHVVTIRLDRESIAGLRFWNYNKSPE------DTYRGAKIVHVSLDGL.................................................................................................................................. 100
8 -4.430sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4  ali   18  33.................................................................................................................................................LSSTGPFALEPDATGTSKGIEFTTASTLSLVNKYDVDL.......................................................................................................................... 70
9 -4.410sp|Q9HAZ2|PRD16_HUMAN PR domain zinc finger protein 16 OS=Homo sapiens GN=PRDM16 PE=1 SV=3  ali   6  4.KPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGIFPP................................................................................................................................................................................................................................................................ 51
10 -4.400sp|Q8N1Q8|THEM5_HUMAN Thioesterase superfamily member 5 OS=Homo sapiens GN=THEM5 PE=2 SV=2  ali   17  54...............................................................................DYALPNASWCSDMLSLYQEFLEKT-----------KSSGWIK--LPSFKSNRDHIRGLKLPSGLAVSSDKGDCRIFTRCIQVGQGFE........................................................................................................................................... 128
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;