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Query: IDP90401 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_579 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTGVRGDNAPDPSLLAQLTQNANSASAASTGKNGQVAGAKQENVDASFEDLLQDAQGTGGSKKATANQTSKSGKSEKAQASSGTSTTTSVAQASQTATAQAVHGARDSGFNSDGSATLPSPTGTEVNGVVLRKGMGTLALMGLIMTLLAQASAKSWSSSFQQQNQAIQNQVAMAPEIGNAIRTQANHQAQATELQAQQSLISGITNIVGFAVSVGGGILSASKSLGGLKSAAFTNETASATTSATSSLAKTATSALDDVAGTATAVGAKATSGAASAASSAATKLTQNMAESASKTLSQTASKSAGGLFGQALNTPSWSEKVSRGMNVVKTQGTRAAKFAGRALSSAMNISQMVHGLTAGIDGIVGGVIGAQVAQEQRMAGMAEARAEELKSLNSVQAQYASQAQQLQEQSQQSFNSALQTLQSISDSALQTTASMFNLast
1 -4.720sp|Q8IWV7|UBR1_HUMAN E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens GN=UBR1 PE=1 SV=1  ali   16  1......................................................................................................................................................QRLASWWDQQVDFYTAFLHHLAQLVPEI---YFAEMDPDLEKQEESVQMSIFTPLEWYL...................................................................................................................................................................................................................................... 56
2 -4.630sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1  ali   17  2............................................................................................................................QDVHEFLLETNGGILELMMRYLKAMGHKFLVRWPPGVLSVYHSWRRHSTSLPNP-KHIKDMMLMSLSCMELQLDQ................................................................................................................................................................................................................................................ 88
3 -4.360sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3  ali   22  2................................................................................................................................................................................................................................................................................................................................................................KLIFNITASVPLPDERNDTLEWENQQRLLQTLETITNKLKR-------------TLNKDPMYSFQLASEIL--IAD........... 62
4 -3.760sp|Q5SYB0|FRPD1_HUMAN FERM and PDZ domain-containing protein 1 OS=Homo sapiens GN=FRMPD1 PE=1 SV=1  ali   14  3..............................................................................................................................................................................................................................................................................................................................WPEYCSRALRQLKATPASTPEGFIQLMESLLELQDILETSWG............................................................................... 44
5 -3.730sp|P28290|SSFA2_HUMAN Sperm-specific antigen 2 OS=Homo sapiens GN=SSFA2 PE=1 SV=3  ali   11  76.........................................................................................................................................................................................................................................................................................................................................................AIEMQLRRVLHDIRNSLQ............................................................................ 93
6 -3.560sp|Q8IWV8|UBR2_HUMAN E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens GN=UBR2 PE=1 SV=1  ali   18  17.................................................................................................................................................LECSAEEIAGKWLQATDLTREVYQHLAHYVPKI---YCRGPNPFPQKEDMLAQHVLLGPMEWYL...................................................................................................................................................................................................................................... 77
7 -3.400sp|Q8NI60|ADCK3_HUMAN Chaperone activity of bc1 complex-like, mitochondrial OS=Homo sapiens GN=ADCK3 PE=1 SV=1  ali   11  2..............................................................................................................................................................................................................................................................................................................................................................................AAILGDTIMVAKGLVKLTQAAVETHLQHLGIGGELIMAARALQSTAVEQIGMFLGKVQGQDKHEEYFAE.... 70
8 -3.290sp|Q5VWK0|NBPF6_HUMAN Neuroblastoma breakpoint family member 6 OS=Homo sapiens GN=NBPF6 PE=2 SV=2  ali   20  17..............................................................................................................................................................SHHRSEVQISQAQLEPSTLVPSCLRLQLDQGFHCGNGLAQRGLSSTTCSF....................................................................................................................................................................................................................................... 66
9 -3.270sp|O60645|EXOC3_HUMAN Exocyst complex component 3 OS=Homo sapiens GN=EXOC3 PE=1 SV=2  ali   23  1.....................................................................................................................................................................................................................................................................................................................................................................................VVQHSQLA----AAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDG.......... 52
10 -3.210sp|Q15434|RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 OS=Homo sapiens GN=RBMS2 PE=1 SV=1  ali   17  1.........................................................................................................................................................................................................................................................................................................................VPNPSW---MHHHSYLMQPSGSVLTPGMDHPIS--LQPASMMGPLTQQLGHLSLSSTGTYMPTAAAMQG......................................................... 64
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.