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Query: IDP90826 gene: alaS; alanyl-tRNA synthetase [Yersinia pestis CO92] YPO3305 [Yersinia pestis CO92], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKSTAEIRQAFLDFFHSKGHQVVSSSTLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTSEQWFNLPKEKLWVTVYETDDEAYNIWANEVGVPHERIIRIGDNKGGAFASDNFWQMGDTGPCGPCSEIFFDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRDLIAAVADVTGATDLSSKSLRVIADHIRSCAFLISDGVIPSNENRGYVLRRIIRRAIRHGNMLGAKETFFYKLVAPLIAVMGPAAAELKQQQAMVEQVLKTEEEQFARTLERGLALLDDELSKLTGDTLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSLIRVDSASQFSGYDHVQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYDDQVRVLTMGDFSTELCGGTHASRTGDIGLFRILTESGTAAGIRRIEAVTGEGAIALLHQQSDLLQDVAHLVKGDIHNLADKVRAVLDRSKMLERELQQLKDQQAAQESASLSSSAKLINGVKLLVSQLDNVEPKMLRTMVDDLKNQLGSAIIVLATTADDKVSLIVGVTKDLTGKVKAGELIADIAQQVGGKGGGRPDMAQAGGTDVQALPAALASVEAWVASRMLast
1 -5.320sp|Q6ISB3|GRHL2_HUMAN Grainyhead-like protein 2 homolog OS=Homo sapiens GN=GRHL2 PE=1 SV=1  ali   18  9...................................................................................................................................................................................................................................................................................................................................................KRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVP...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 74
2 -5.050sp|Q9H5I5|PIEZ2_HUMAN Piezo-type mechanosensitive ion channel component 2 OS=Homo sapiens GN=PIEZO2 PE=2 SV=2  ali   12  8.........................................................................................................................................................................................................................................................................................................................................FTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHM........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 62
3 -5.020sp|O60242|BAI3_HUMAN Brain-specific angiogenesis inhibitor 3 OS=Homo sapiens GN=BAI3 PE=1 SV=2  ali   19  9............................................................................................IYGSYSVSEMFPKNFTNCTW------------------TLENPDPTKYSIYLKFS---------------------------KDLSCSNFSLLAYQF-DHFSHEKIKDLLRKNHSIMQLCNFVFLQYDKN............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 97
4 -4.920tr|E7EX13|E7EX13_HUMAN Uncharacterized protein OS=Homo sapiens GN=ALPK1 PE=4 SV=1  ali   14  17........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LLPSELRTLIQEAKEMKWPFVPEK-----WQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFDVSGKLLQVAKGLHKLQPATPIAPQ------VVIRQARISVNSGSHPA.................................................................................................................................................................................. 138
5 -4.910sp|Q96B77|TM186_HUMAN Transmembrane protein 186 OS=Homo sapiens GN=TMEM186 PE=2 SV=1  ali   10  9LNESGTMLRVAHLNFWGWRQDTYCPMADVIPLTETKDRPQEMFVR---------------QRYSGKQTFYVTLRYGRILD------RERFTQVFGVHQM........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 87
6 -4.720sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1  ali   15  2.........KNCIQLAACEATELLPMIPDLPAD----LFTSCLTTPIK-WFCMQKCVSLVPGVTLDLIEKIPGRLNDRRTP------------------------GELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFL---AERIMRVSSPRLPPTYMHAMWQAWDL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 148
7 -4.720sp|Q96IP4|FA46A_HUMAN Protein FAM46A OS=Homo sapiens GN=FAM46A PE=2 SV=2  ali   15  1...................................................................AIRVLADQNVIPNVANVTCYYQPAPYVADANFSNYYIAQV................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 40
8 -4.700sp|A6NK97|S22AK_HUMAN Solute carrier family 22 member 20 OS=Homo sapiens GN=SLC22A20 PE=2 SV=1  ali   9  35.........................................................PLDQLGAPEPCRRFTKPQWALLSPNSSIPGAATEGCKDGWVYNRSVFPSTIVMEWDLVCEARTLR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 99
9 -4.600tr|E9PG74|E9PG74_HUMAN Uncharacterized protein OS=Homo sapiens GN=TPCN2 PE=4 SV=2  ali   15  2..............................................................................................................................................................................................................................................................................................................SQFRGYLMKSLQTSLFR--RRLGTRAAF--EVLSSMVGEGGAFPQAVGVKPQNLLQVLQKVQLD-----SSHKQAMMEKVRSYGSVLLSAEEFQKLFNEL......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 92
10 -4.510sp|Q8TAL6|FIBIN_HUMAN Fin bud initiation factor homolog OS=Homo sapiens GN=FIBIN PE=2 SV=1  ali   19  17....................HYFVPDGDYEENDDPELLFRVSDHRR--SQGEGSQVGSLLSLTLREEFTVLGRQVEDAGRVLEGISKSISYDLDGEESYGKYLRRES................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 105
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.