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current user: public |
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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSE | Last |
1 | -5.230 | sp|Q6IQ49|CA055_HUMAN UPF0667 protein C1orf55 OS=Homo sapiens GN=C1orf55 PE=1 SV=1 | ali | 16 | 5 | .AALVWIRGPGFGCKAVRCASGRCT-----VRDFIHRHCQDQNVPVENFFVKCNGALIN......................................................................................... | 57 |
2 | -5.190 | sp|Q92665|RT31_HUMAN 28S ribosomal protein S31, mitochondrial OS=Homo sapiens GN=MRPS31 PE=1 SV=3 | ali | 13 | 3 | ...........LNIFDMMAVTKEAPETDTSPSLWDVEFAKQLATVNEQPLQNGFEELIQWTKEGK------INNEAGFDDDGSEFHEHI---------FLEKHLESFPKQGPIRHFMEL------VTCGLSKNPY-LSVKQKVEHIE. | 121 |
3 | -5.120 | sp|Q5T0Z8|CF132_HUMAN Uncharacterized protein C6orf132 OS=Homo sapiens GN=C6orf132 PE=1 SV=4 | ali | 13 | 1 | MKKKQTVQGTFSKLFGKKHTTTPST---------------------SLYATNPPWIFTQEAPEEGTG------------------FDGIYYGDNRFNTVSESGTATLKARPRVRPLLTFLPLNAQENHGLAV................ | 94 |
4 | -4.860 | sp|Q3ZCV2|CA177_HUMAN Uncharacterized protein C1orf177 OS=Homo sapiens GN=C1orf177 PE=2 SV=3 | ali | 12 | 5 | VARSVGTRGPYDTFSGDRKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHNKKHGVFSKLPRNPKTPTERIYWAN......................................................................... | 80 |
5 | -4.520 | sp|Q9H5I5|PIEZ2_HUMAN Piezo-type mechanosensitive ion channel component 2 OS=Homo sapiens GN=PIEZO2 PE=2 SV=2 | ali | 6 | 2 | ..............................................ATHYPTDERKLLSMTQDDYKPSDGLLVTVNGNPVDYHTIHPSLPMENGP..................................................... | 50 |
6 | -4.180 | sp|Q8N5R6|CCD33_HUMAN Coiled-coil domain-containing protein 33 OS=Homo sapiens GN=CCDC33 PE=1 SV=3 | ali | 14 | 1 | ..............MAFRGPEPWVSASLLRQRLKAEEKTLDLEFEVLSVGFNEAGRAENPLQVGSGAGVQLQVNDGDPFPACSAITDVIEQ-------------QEPGQSLTLTRSKFIFTLPKGFCKNDGQHDAQLHVEAL...... | 121 |
7 | -3.840 | sp|Q8IY21|DDX60_HUMAN Probable ATP-dependent RNA helicase DDX60 OS=Homo sapiens GN=DDX60 PE=2 SV=3 | ali | 13 | 4 | ................................RLVLYGERYNDLEKHVCSIKHGDIHFDHFHPCAALTTDHIERYGFPPDLTLSPRESIQLYD-----AMFQIWKSWPRAQELCPENFIHFNNKLVIKKMDARKYEESLKAELTSWIK | 114 |
8 | -3.740 | sp|P58499|FAM3B_HUMAN Protein FAM3B OS=Homo sapiens GN=FAM3B PE=1 SV=2 | ali | 8 | 45 | ..NIAIVNYVTGNVTATRCFDMYEGDNSGPMTKFIQSAAPKSLLFMVTYD--------DGSTRLNNDAKNAIEALGSKEIRNMKFRSSWVFI........................................................ | 126 |
9 | -3.740 | sp|Q49AQ9|MGT4L_HUMAN Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515 OS=Homo sapiens PE=2 SV=1 | ali | 6 | 40 | ..................NPPGAVFTDMQVSDVHFPWEAYTLDESFFWTHNISIGNHLTVILNHPANLSRVQVMTGSIVEWEVRPGEGAGGAG....................................................... | 114 |
10 | -3.520 | sp|Q9P1Z9|CI174_HUMAN Uncharacterized protein C9orf174 OS=Homo sapiens GN=C9orf174 PE=1 SV=2 | ali | 9 | 59 | ....LFSEGGNFS---PKEINSL-CSRLEKEAARIELVESVIMLNMEKLENEYLDQANDVINKFESKFHNLSVDLIFIEKIQRLLTNLQVKIKC------QVAKSN.......................................... | 150 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |