Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP92583 beta adaptin protein, putative [Toxoplasma gondii ME49] TGME49_040870 [Toxoplasma gondii ME49], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720    .  730    .  740    .  750    .  760    .  770    .  780    .  790    .  800    .  810    .  820    .  830    .  840    .  850    .  860    .  870    .  880    .  890    .  900    .  910    .  920
# Score Template Links and tools%idFirst MTDGNYFQPAKRGELHELKEELHSSNKEKKKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTTNMELKKLVYLYVINYAKAQPELAILAINTFRKDSLDPNPLIRALAVRTMGCIRLEEITEYLVEPLRRSCKDPDPYVRKTAAICVAKLFSIRPDMVGEEGFIEELTTMLSDSNPVVVANAVAALSEISENSGRNYMKNILNAKESNVNKLLAALNECTEWGQVFILDALAQFEPETPRAAESVLDRVTARLSHANSAVVLSAIKVVMKLLDKVTNPDVVRAVHRKLCPPLVTLLSAEPEIQYVALRNIELIVQKRPSILASEVKMFFCKYNDPVYVKIEKLDILVRLVSEKNVDQVLSELKEYATEVDVDFVRKAVRCIGRCAIKLDCAAERCVAVLLDLIQTKVNYVVQEAIVAIKDIFRKYPNQYESMISTLCENLETLDEPAAKASMVWIVGEYVDRIDNADELLETFLETFHDEPSIVQLQLLTATVKLFLKKPAHTQDLVTKVLKMATEETYNPDLRDRAYIYWRMLARNPEAAKKVVFAPKPPINEDADALDYNTLDRLIGNISLLSSVYHKAPETFVARAMPPSAALPKEVGSCSSDGESTDARVEQAKQSMQKQHYSSDEKEEESSPTSSEDSDSDSDGPTDLLGLSDEATPRKRSSKESSDDLFDLSSPPEDPRGVGKTLVLAADRPGNQGRTGLQVSAALTRAHGRIQLHLTLANKSSMTLNGWAIQFNRNSFGLAPAANLQVADLLSGQSAETTVPVVPGQLMSNAAPEQPLSLQVAVKTNLDIFCFTVPFDLSVVLQENSSADKDVFRQRWQNIGEARQSSLMASAPSSQSPQAVTKQMQAANISLVAQRSADTFDALYFSATTTNNLVVLAEVSLQRNGNAVKLVTRSEAAALLPLFTSTVCAALRLTPRSLast
1 -7.850sp|Q6YHU6|THADA_HUMAN Thyroid adenoma-associated protein OS=Homo sapiens GN=THADA PE=1 SV=1  ali   10  25...KSFADVEGKNLASLLLHCVQLTDGVSQIHYIKQILEKADKNGMCDPTIQSCLDILAGLKNPLKKVLASSLNSLPDFFLPEAMHRFSRLQEELNTTDLYSYRKVTDNISSC---ENFNLGRASVNNLLKNVLHFLQKSLIEILEENRKCAGNHIIQTQLMNDLLVGIR----MLVQKVQDFQGNLWKTSDSPIWQNMCGLLSIFTKVLSDDDLLQT----LAIILFIKTMFHPSEKIPHLISSVLLRSVDCTSAVLFLCQGTLAMLDWQNGSMGRSGEALLLDTAHVLFTLSSQEPTLEMFLSRILASWTNSAIQVLESSSPSLTDSLNGNSSIVGRLLEYVYTHWEHHQTKIMFKNLLQMHDFVPDPFFVELTESLLRLEWHIKGKY--CLGCLVECIGVE-KTIPSQILEVMGDLVPYASDLLETMFRNHKSHLKSQTAESSWID-TWV-----------SPLLFILCEGNLDQKSYVIDYYLPKLLSY---SPESLQYMVKIL................................................................................................................................................................................................................................................................................................................................................................................................................................ 568
2 -7.850tr|B6ZDQ0|B6ZDQ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=THADA PE=4 SV=1  ali   10  25...KSFADVEGKNLASLLLHCVQLTDGVSQIHYIKQILEKADKNGMCDPTIQSCLDILAGLKNPLKKVLASSLNSLPDFFLPEAMHRFSRLQEELNTTDLYSYRKVTDNISSC---ENFNLGRASVNNLLKNVLHFLQKSLIEILEENRKCAGNHIIQTQLMNDLLVGIR----MLVQKVQDFQGNLWKTSDSPIWQNMCGLLSIFTKVLSDDDLLQT----LAIILFIKTMFHPSEKIPHLISSVLLRSVDCTSAVLFLCQGTLAMLDWQNGSMGRSGEALLLDTAHVLFTLSSQEPTLEMFLSRILASWTNSAIQVLESSSPSLTDSLNGNSSIVGRLLEYVYTHWEHHQTKIMFKNLLQMHDFVPDPFFVELTESLLRLEWHIKGKY--CLGCLVECIGVE-KTIPSQILEVMGDLVPYASDLLETMFRNHKSHLKSQTAESSWID-TWV-----------SPLLFILCEGNLDQKSYVIDYYLPKLLSY---SPESLQYMVKIL................................................................................................................................................................................................................................................................................................................................................................................................................................ 568
3 -7.690sp|Q13395|TARB1_HUMAN Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1  ali   9  16....................................................................................................................VCLSFLLKKYHTLIPTTGSEILEPFLPAVQMP----------IRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLTSSESLCIESFDMAWKIISSLSNTQLIFWAVQFVKVLTIAAKIKGQAYFKIKEIMYKIIEMSAIKTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFRRDQRLVQDVQTFIENLGHDCAANIVMENTKREDHYVRICAVKFLCLLDGSNMIEDLAIKLLDYVNSLQHRVKNRVWQTLLVLFPRLDQNLNGIIDRIFQAGFTNNQASIKYFIEIIILILHKFPQFLPKFWDCFSYGEEN--LKTSICTFLAVLSHLDIITQNIPQALIVVLQWCFNHNFSVRLYALVALKKLWVEEFDALTPVIESSLHQVESMHGAGNARIQEHFFFATFHPLKDYCLETIFYILPRLSGLIED................................................................................................................................................................................................................................................................................................................................................................................ 494
4 -7.480sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3  ali   10  65.................TELALTASDRQTKVAACELLMVMFMLGKATQ-TFPVLLRLACDVDQVTRQLYEPLVMQLIHFESQDTVALLEAILDGIVDPDSTLRDFCGRCIREFKSPVNTKSLFKRLYSLALHPNAFKRLGASLAFNNIYREEEESLVEQFVFEALVIYMDEKSLGTIQQCCDAIDHLCRRLPRGFPPSASLCLLDLVKWLLAHCGRPQTECRHKSIELFYKFVP-KEEGVSFLINTFEGGGCGQPSGILAQPTLLYLR-LLLAALECYNTFIGERTVGALQVLGTEAQSSLLKAVAFFLESIAMHDKCFGTGAAGNRTSPQEGERYNYSKCTVVVRIME---TTTLLNTSPEGWKLLKKDLCNTHLMRVLVQTLQVMAHLPDVCVNLMKALK------MSPYKDILETHLREKITAQSIEELCAVNLYGPDAQVDRSRLAAVVSA---KQLHRAGLLHNILPSQSTDLHHSVGTELLSLVYKGIAPGDLSCKQLASGLLELAFAFGGLCER---------LVS....................................................................................................................................................................................................................................................................................................................................................................................................... 680
5 -7.330sp|Q13200|PSMD2_HUMAN 26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3  ali   17  2...............................................................................................PADMGAHQGVAVLGIALIAMGE-AEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRL----NILDTLSKFSHDADPEVSYN......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 83
6 -7.190sp|Q8WTT2|NOC3L_HUMAN Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1 SV=1  ali   13  2........................................................................................................VAVKSLCELLVANFHNNIIVLIVPLMNDMSKLISEMCCEAVKKLFKQDKLGQASLGVIKVISGFVKGRNYEVRPEMLKTFLCL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 88
7 -6.760sp|Q86VV8|RTTN_HUMAN Rotatin OS=Homo sapiens GN=RTTN PE=1 SV=3  ali   9  48.................ISTDIWDDSSLFGIDMKEKLLLVLALGETMCYHKSSISLEQPEVMLVHHRMAFISISLFAVR---LQTLLPVEKASEFLSEP------MSTALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSIYKRTAEAVYSIECTCNFLSDIGKEGEKNLLELVELADQALRSFSYHQHFPLIKEIISICSKIWKSAQASPLLQGESQKV-LLHMLSH---PLPRVKAETYHCCLEITKEC-HNVTKPVSSLCNGIHFLLHPKVLYEISV---------IQEPESEVNTAAKAILLYLLQGR-ESLCPVIPILQGYADTEDPLG----NCILLLSKASSDTTRLKSMLRLLLVKKPSVRSLALKLLAFHDTKRPLIDARVLSRVTDLFDRRELVIKLETVEKVYEIFTSDLVLRKSAAEQLAVIMQDIKMHAVVKK------------LCLIDKIIEYLNECVSQDGKVVECLVQPCLTLL.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 531
8 -6.750sp|Q9H579|CT132_HUMAN Uncharacterized protein C20orf132 OS=Homo sapiens GN=C20orf132 PE=2 SV=2  ali   8  31............SNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSH--------SPRHLTQQDPLSEAI-----------VEKLIQSIQKVFNGELKGELEKLKFLDLSSLSQALPYD--ADIVHTLNVLVQEESSSMRQEVFVTIADL-----------SYQDVHLLLGSEDRAELFSLTIKSIITLPSVRT---------------------LTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKLPLRFQRLGHL-------------VALMALLCGDPQEKVAEEAAEGIHSLLH--------------------ITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNE-FIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTEKVPEIMGVICAQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHL-----AEVWRMLSVELPSTTWILWRLLRKLQKCHNEPAQEKMAYV............................................................................................................................................................................................................................................................................................................................................................................................................. 477
9 -6.500sp|P57678|GEMI4_HUMAN Gem-associated protein 4 OS=Homo sapiens GN=GEMIN4 PE=1 SV=2  ali   11  152YLNRTSLSKEDRQVVSELAECVNRALEDITASIAMAVIQQKMDRHM------EVCYIFASEK-SDEWVACLGSNRALFRQPDLVLRLLETVIDVSTADRAIVIHLILECYADLSVEGFQEDLNTTFNQLTQSASEQGLAKAVASVARLVIVHPEVT----VKKMCSLAVVNLGTHFLAQILTAFPALRFQGPNSSATFMVSCLKETVWMKFSTPKEEKQF--LELLNCLMSPVKPQGIPVAALLEFVLPFLRLDVEEVDLSLRIFIQTLEANACREEYWLQTCSPFP----------------LLFSLCQLLDR--------FSKYWQLPKEKRCLSLDRKDLAIHI-----LELLCEIVSANAETFSPDVWIKSLSWLHRKLEQLDWTVGLRLATLFEICKLSEDE-AGTGLLAWMECCCVSSGISERMLSLLVVDVGNPEEVRLFSKGF-SPQEWQRLHQLTRRLLEKQLLHVPYSLEYIQFVPLLNLKPF--AQELQLSVLFLRTFQFLCSHSCRDWLPLEGWNH--VVKLLCGSLTRLLDS........................................................................................................................................................................................................................................................................................................................................................................................... 743
10 -6.280sp|Q14669|TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1  ali   13  1....................................................................................................................................AGPAVRHKCLRAILRIIYFADDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 74
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.