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Query: IDP00015 UDP-N-acetylenolpyruvoylglucosamine reductase 1 (UDP-N-acetylmuramate dehydrogenase 1) BA_4048 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEQLVNELIQANVGRVLVDEPLARYTTMKIGGPADILIVPKRVAGIEKTLQLVKKYKTKWTVIGRGSNLLVSDLGIEGVVIRLGEGLDHLEVEKHRVRVGGGYPLIKLSTLLSRQGLAGLEFASGIPGSVGGAVYMNAGAHKSDISNILSKALILFEDGTIDWLTHGEMEFSYRTSVLQTKRPGIVLEAEFQLQIGERERIVSVMQKNKDYRRETQPWNHPCAGSVFRNPTPYFAGDLIEKAGLRGYQIGGAQISEMHGNFIINTGGASAQDVLSLIALIKQTIKDKFGVEMHTEVEIIGRLast
1 -109.0004pyt_A mol:protein length:309 UDP-N-acetylenolpyruvoylglucosamine reductase  ali model follow..  64  1MDKVIQELKDLQVGKVLENEPLANHTTIKIGGPADCLVIPKDIQAVRDTMEVVKNHGVQWRAIGRGSNLLVLDEGIRGVVIKLGAGLDHMEIDGEQVTVGGGYSVVRLSTGISKKGLSGLEFASGIPGSVGGAVYMNAGAHGSDISRILVKALILFEDGTMEWLTNEEMEFSYRTSILQNKRPGICLEAVLQLEQKERDAIVAQMQKNKDYRKETQPVSNPCAGSIFRNPLPDHAGRLVEQAGLKGHRIGGAKVSEMHGNFIVNAGGATAKDVLDLIAFIQKTIKEKYDIDMHTEVEIVGE 301
2 -102.0001hsk_A mol:protein length:326 UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE  ali model follow..  39  9NKDIYQALQQLINEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLS-LDHIEVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQK-EHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGE 308
3 -101.0003tx1_A mol:protein length:322 UDP-N-acetylenolpyruvoylglucosamine reductase  ali model follow..  39  16.SNAMNNLQTKFHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDL-LQTIERNNTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAE-KNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSCGSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVKIIGE 314
4 -92.7002gqt_A mol:protein length:268 UDP-N-Acetylenolpyruvylglucosamine Reductase  ali model follow..  37  1...........MEFMRVERVLLKDYTTLGVGGPAELWTVETREE-------LKRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY---DLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPP--GGIVTRVRLKLKERPKEEILRRMAEVDRARK-GQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQ----EELPLELEWEVW.... 267
5 -69.9003i99_A mol:protein length:357 UDP-N-acetylenolpyruvoylglucosamine reductase  ali model follow..  29  1MASLSYPKTTM---QIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTC-HYTGMIVVNRLNGIEHQQDDDRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCETGTVKRLTMEECQFGYRDSIFKHQQKAVVTAVGLKFAKAWQPIIQYGPLKDTRMEKLPDPAVMGNAGSFFKNPVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAADIQQRVFNCYGIELEHEVRFIGE 343
6 -68.1001mbb_A mol:protein length:342 URIDINE DIPHOSPHO-N-ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE  ali model follow..  25  2..................NHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLE-DYRGTVIINRIKGIEIHDEPDYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVEATGKQVRLTAKECRFGYRDSIFKHEDRFAIVAVGLRLPKPTTVTPQQVFNAVCHMRTTKDPKVNGNAGSFFKNP-KLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGA 331
7 -67.1004jay_A mol:protein length:340 UDP-N-acetylenolpyruvoylglucosamine reductase  ali model follow..  27  1..........SMSLELQEHCSLKPYNTFGIDVRARLLAHARDEADVREALALARERGLPLLVIGGGSNLLLTR-DVEALVLRMASQGRRIVSDAALVEAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDQDGTLREFDRQACRFGYRDSLFKQEPDWLILRVRLRLTRRERLHLDSRVICAIRREKLPDPAVLGNAGSFFKNP-KLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNL... 339
8 -61.2005jzx_A mol:protein length:405 UDP-N-acetylenolpyruvoylglucosamine reductase  ali model follow..  30  44..............HIAEAVPLAPLTTLRVGPIARRVITCTSAEQVVAALRAAKTGADRPLVFAGGSNLVIAENLTDLTVVRLA--NSGITIDGNLVRAEAGAVFDDVVVRAIEQGLGGLECLSGIPGSAGATPVQNVGAYGAEVSDTITRVRLLDCTGEVRWVSARDLRFGYRTSVLKHADGLAVLIAALNATSGERADPQAVREAVLALRARKGMVLDPSVGSFFTNP-KLAAGWLVERAGFKGYPDAGARLSTKHALALTNRGGATAEDVVTLARAVRDGVHDVFGITLKPEPVLIG. 396
9 -14.5001i19_A mol:protein length:561 CHOLESTEROL OXIDASE  ali model follow..  16  36.................................ATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMTPLTVEKGANVEKVILADTMTHNTGGPVATVTAGAGASIEAIVTELQKHDLG-WANLPAPGVSIGGALAVNAGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLGRCFLTSVTMQAGPNPKGADGRTFEKFVAESGGAEAIWYPFTEKPW.......................................................................... 270
10 -13.6003w8w_A mol:protein length:468 Putative FAD-dependent oxygenase EncM  ali model follow..  16  12.PATLAAFSAAFRGELIWPDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSKVSRRLRRARAQGGCLLGAFDTATQAHMLAGVVSHTGLGGVLGGGFGWLSRKYGLSI-DNLTSVEIVTADGGVLTASDTDLFWAVRGG---GGNFGVVTAFEFDLHRVGSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGICAMSCWIGDPHEGERQLESILHAGKPHGLTKATL......................... 307
11 -13.5002bvf_A mol:protein length:459 6-HYDROXY-D-NICOTINE OXIDASE  ali model follow..  15  1MVSSKLATPLSIQGEVIYPDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDGGIVLDLRLMNSHIDTAGSRARIGGGVISGDLVKEAAKFGLAGMHPKVGFCGALNGGVGFLTPKYGLAS-DNILGATLVTATGDVIYCSDDELFWAVRGA---GPNFGVVTEVEVQLYELPRKMLLAGLLTSLLDALNEMADHIYPSVFVGVDENRAPS------VTVCVGHLGGLDIAERDIARLRGLGRTVSDSIAVR......................... 291
12 -13.4001f0x_A mol:protein length:571 D-LACTATE DEHYDROGENASE  ali model follow..  13  10.KAFLNELARLVGSSLTDPAKTARYRK-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLT-NDYDRDVVIISTLRLDKLHVLGGEQVLAYPGTTLYSLEKALKPLGRE----SSCIGASVIGGICNNSGVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDD-DVRHDGRHAHDYDYVHRVRD----------EADTPARYNADPDRLFES--SGCAGLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEY..... 309
13 -13.3004aut_A mol:protein length:468 DECAPRENYL-PHOSPHORYL-BETA-D-RIBOFURANOSE-2-OXIDOREDUCTASE  ali model follow..  17  32.................................ASVLSTSDPEVIVRAVTRAAEEGGRGVIARGLGRSYGDNAQNGGGLVIDMPNRIHSIDSGTRLVDVDAGVSLDQLMKAALPHGLW-VPVLPGTR-TVGGAIGCDIGKNHGSFGNHVRSMELLTANGEVRHLTPAGPD--FWATVGGNGLTGIILRATIEMTPTETAYFIADGDVTGS........................................................................................... 215
14 -13.0004ud8_A mol:protein length:532 FAD-BINDING AND BBE DOMAIN-CONTAINING PROTEIN  ali model follow..  12  84...................................FIFEPLYETHVQAAVVCAKKLQLHLRLRSGGHDY-FVAEDETPFVIVDLSKLRQVDVDSNSAWAHAGATIGEVYYRIQEKSQAGLCSSLGIGGLVGGAYGSMMRKFGLGA-DNVLDARIVDANGQILDRAAMGEDVFWAIRGGGGGSFGVILAWKIKLVPVPATVTGTKVLYKWEQIADKLDDDLFIRVIISPASKTTKPGNRTISMSYQAQFLGDSNRLLQVMQKSFPELGLTKKDCTEM......................... 345
15 -12.9002uuu_A mol:protein length:584 ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE  ali model follow..  15  133............................QVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIEPVSNERFTVSIDMRRKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSGHDPDSFEFSTLGGWLATCSSGHQGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHISEGTLGIITEAVMKVHA--------------------VPQAVEYYGFLF--PTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKY................. 380
16 -12.8002vfr_A mol:protein length:422 XYLITOL OXIDASE  ali model follow..  20  21.................................AKELLRPHSLDALRALVADSA----RVRVLGSGNEIAEPGDG--GVLLSLAPSVVDVDTAARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSGGSLASVVREVELVTADGSTVVIARGD----FGGAVTSLGALGVVTSLTLDLEP.......................................................................................................... 182
17 -12.6003js8_A mol:protein length:540 Cholesterol oxidase  ali model follow..  16  30.................................DVWTCAPRSADEVVKVANWAKDNGYKVRARGMMSPLTLAAGV-AVVLLDTTRYLTAMSIDASKVTAQAGITMEALLTGLEKAGLG-VTAAPAPGDTLGGVLAINGGASYGSISNLVLSLTAVVYDKASGAYALRKFA--QIAPLLAHVGRSLIVEATLQAAPAAAGSGGRTFASYLDSAGRVEAIWFPFTSNPW.......................................................................... 266
18 -12.3003pm9_A mol:protein length:476 Putative oxidoreductase  ali model follow..  13  50...............................GHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHNGVVISLKRKIREIDTSSNTITVEAGAILQRVQEKAAEVDR-PLSLGAQGSCTIGGNLSTNAGGTAGLARDMALGVEVVLADGRVSKLKKDNTGYDLRDLFIAEGTLGIITAATLKLFPKPRAVETAFVGQSPDDALKLLGIAQGEAAGNL------TSFELIAETPLDFSV--RDPLEARYPWYVLIELSSPRDDARAALESILERGFEDGIVV.......... 320
19 -12.1006f74_A mol:protein length:598 Alcohol oxidase  ali model follow..  14  121............................ILGSLPYYAVNASTREDITLTLNFAKQHNIRLVTSSTGHDLLGRSDGYGGLELWLANKCTKSGWTGSAIHIDGAYQWRDVYTVAQANNVGGGSPSPGAIGPSGGGHGPATHNFGLGA-DQVLEAQIMLADGRIVTANHSDLFRAIRGG---GPGYGIVLSQHIKVHPNVKAVTAHRLAIAPRNETAENKDLLDAIAVLHQQLPA------LSNNGVAGYGF--VGDAHSGYTHGFWTIGKRQAEAEKAVAPLMNALKK............... 398
20 -12.1004fdn_A mol:protein length:481 oxidoreductase DprE1  ali model follow..  17  38.................................ANVLRTPDAEMIVKAVARVAESGGGGAIARGLGRSYGDNAQNGGGLVIDMTNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLW-VPVLPGTR-TVGGAIACDIGKNHGSFGNHVRSMDLLTADGEIRHLTPTGED--FWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDE........................................................................................ 225
21 -12.0005oel_A mol:protein length:477 Decaprenylphosphoryl-beta-D-ribose oxidase  ali model follow..  17  34.................................ANVLRTPDAEMIVKAVARVAESGGGGAIARGLGRSYGDNAQNGGGLVIDMTNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLW-VPVLPGTR-TVGGAIACDIGKNHGSFGNHVRSMDLLTADGEIRHLTPTGED--FWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDE........................................................................................ 221
22 -11.7005fxd_A mol:protein length:526 PROBABLE VANILLYL-ALCOHOL OXIDASE  ali model follow..  11  14FDAALQRFRDVVGDKLSTADELEAFVGAAEANLPSAVVSPESTEQVQDIVRIANEYGIPLSPVSTGKNNGYGGA--GSVIVKTGERMNRINEKYGYALLEPGVTYFDLYEYLQSH---DSGLMLDCPDLGWGSVVGNTLDRGGDHFMWQTGLEVVLPQGEVMRTGMGALP-PFPDGMFTQSNLGIVTKMGIALMQ.......................................................................................................... 236
23 -11.6006f72_A mol:protein length:574 MtVAO615  ali model follow..  12  119............................QLGNYPSYVVNVTGAADVQAALKFAQKHNVRIVIKNTGHDYLGKSTGKGALSLKFIKNYKAPYYKGPAAKLGAGVEGFEAYAMANSTGHGGTCPTVGIVGTQGGGHSILSSSYGVAA-DNVLEWEVVTADGRHLVATPSDLYWALSGG---GGTFAVVLSMTARLHRDGI....................................................................................................... 301
24 -11.6001zr6_A mol:protein length:503 glucooligosaccharide oxidase  ali model follow..  15  36..........................NLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFG-GHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQG-HGTCPAVGVGGVLGGGYGFATHTHGLTL-DWLIGATVVLADASIVHVSETDLFWALRGG---GGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINALNWEGNFFGNAKDLKKILQPIMKKAGGKST.............................. 288
25 -11.5002exr_A mol:protein length:524 Cytokinin dehydrogenase 7  ali model follow..  15  30.....VSESLNIQGEILCGGAAADIAGRDFGGMNCAVVRPVGPEDIAGAVKAARSDKLTVAARGNGHSINGQAMAEGGLVVDMST-TAENHFETAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPD....................................................................................................... 240
26 -11.4004bby_A mol:protein length:658 ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL  ali model follow..  13  201............................MFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVS-ADETRTIISLDTSQRILWVDENNLTAHVEAGITGQELERQLKESGYCGHEPDSLEFSTVGGWISTRASGMKGNIEDLVVHMKVVTPRGVIEKGPRMSTGPDIHHFIMSEGTLGVITEATIKIRP--------------------TPEYQKYGSVAFPN---EQGVACLREIAKQRCAPASIRLMDNQQFQFGHALKPQVSSIFT.......................... 441
27 -11.3001dii_A mol:protein length:521 P-CRESOL METHYLHYDROXYLASE  ali model follow..  11  18FNKAVQKFRALLGDDLVESDQLVPYNVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSA--GQVILDLKKKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGGEHFMMQCGMEVVLANGDVYRTGMGGVP-PTLDGMFTQANYGICTKMGFWLMP.......................................................................................................... 240
28 -11.2006c80_A mol:protein length:489 cytokinin oxidase LuCKX1.1  ali model follow..  11  27.................................PLALIRPSGADDVARVLKSARSSNLTVAARGNGHSINGQAMADGGIVLDMRSTEGRINGGDHYADVSGGALWEDILMRCVSEYGLAPRSWLTVGGTLNAGVSGQAFRYGPQS-SNVTELDVVTGKGDFLTCSPTQNSDLFFGALGGLGQFGVITRARIPLEPAPD....................................................................................................... 203
29 -11.0001w1o_A mol:protein length:534 CYTOKININ DEHYDROGENASE 1  ali model follow..  13  69.................................PAAVLYPSSTGDLVALLSAANSTPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDNVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTL--SNAGISGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPA....................................................................................................... 247
30 -10.8001ahu_A mol:protein length:560 VANILLYL-ALCOHOL OXIDASE  ali model follow..  15  71.................................ASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGA--GSVVLDMGKNMNRVNVEGAYCVVEPGVTYHDLHNYLEANNLR-DKLWLDVPDLGGGSVLGNAVERGGDHWMMHSGMEVVLANGE-------------------------LLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIW------MPNPRGYQSYLITL--PKDGDLKQAVDIIRP................... 298
31 -10.8005k8e_A mol:protein length:497 FAD linked oxidase-like protein  ali model follow..  15  54..........................NDRLPYTPAAIAKPATVEHIQAAVLCAAEVGVKANPKSGGHSYLGGEDG--HLVVELDRMYNTLDPETHIATVQPGARLGHIATVLYEEGKHGTCPGVGVGGSLHGGFGFSSHSHGLAV-DWITSADVVLANGSLVTASETDLFWALRGA---GSNFGIVASFRFKTFAAPPNEINLPWTNSSNVVKGWGALQEWLLNGGMPEEMNMRVLGNAFQTQLQGLYHGNASALKTAIQPLLALLDANLSSVQEH......................... 314
32 -10.7005d79_A mol:protein length:533 Berberine bridge enzyme-like protein  ali model follow..  13  80...................................SIITPVKASDVQTVIRCAQLHGIHVRTRSAGHCY-YIAYNKPFAVIDLRNLRSSLDVDNRTGWVQTGATAGELYYEIGKTT-AGIHPTVGVGGFSGGGYGTLLRKYGLAA-DNIIDALVVDASGRILDRQAMGEDYFWAIRGGGGSSFGVILSWKVKLVDVPSTITAVRIIKKWQYAADKVPDDLFIRTTLERSNKNAVH------ALFTGLYIGPVNNLLALMEEKFPELGLEKEGCEEM......................... 334
33 -10.7004dns_A mol:protein length:497 FAD-linked oxidoreductase BG60  ali model follow..  12  57...................................YIITPTNASHIQAAVVCGRRHGMRIRVRSGGEGLSYRSEKPEPFAVVDMNKMRAVSIDAATAWVDSGAQLGDLYYGIAKAS-AGVCTTIGVGGFSGGGFGMLLRKYGTAA-DNVIDAKVVDAQGRLLDRKAMGEDHFWAIRGGGGESFGIVASWQVKLLPVPPKVTVFQVHKGIKEGAIDLVTKWQTVAPALPDDLMIRIMAMGQGAMFEALYLGTCK................................................ 284
34 -10.7003rj8_A mol:protein length:473 Carbohydrate oxidase  ali model follow..  15  30..........................NIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFG-GHLMVQLDRMIDVISYNTGIAHVEPGARLGHLATVLNDKY-HGTCPGVGISGFAHGGFGFSSHMHGLAV-DSVVGVTVVLADGRIVEASATDLFWGIKGA---GSNFGIVAVWKLATFPAPKVLTRFGV................................................................................................ 216
35 -10.7006eo4_A mol:protein length:479 PpBBE-like 1  ali model follow..  17  50...................................AFVFPTTVAQVQNAVFCAKQVGVGIVPRGGGHSY-YSLGGRDGVLVVDMEGFKQFSYNAKTAVVGAGFRLGPLYLALWNAG-AGNCPTVGIAGALGGGWGFSSRKFGLVT-DNILEVQLVAANGTVVTANAQDLYFAIRGA---ATSYGIVTQFTFRVHDVSAPVTHFKYRWNDKAVLFKNFKSFQSWGL--NVPAEISAAFYMDPSGLEGTYLGKKTSLLPLVKTFLASAAPNPTRVEEELNWIQLIL................. 307
36 -10.7003tsh_A mol:protein length:500 Pollen allergen Phl p 4  ali model follow..  12  55...................................YIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYYRSLQPETFAVVDLNKMRAWVDGKARTAWVDSGAQLGELYYAIYKAS-AGVCPTIGVGGFAGGGFGMLLRKYGIAA-ENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEM......................... 305
37 -10.6004ml8_A mol:protein length:501 Cytokinin oxidase 2  ali model follow..  16  8.MHVPDEDMLSPLGALRLDGHFSFHDVSAM--LPAAVLHPGSVSDIAATVRHVEGSPLTVAARGHGHSLMGQSQAAQGIVVRMESLRGRLQVHDGFVDAPGGELWINVLRETLKHGLA----HLTVGGTLNAGVSGQAFRHGPQV-SNVNQLEIVTGRGDVVTCSPEDNSDLFYAALGGLGQFGIITRARIALEPAPE....................................................................................................... 221
38 -10.6003d2d_A mol:protein length:538 berberine bridge-forming enzyme  ali model follow..  15  73...................................AIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYYTSDTP--FILIDLMNLNRSIDLESETAWVESGSTLGELYYAITESS-AGWCPTVGTGGISGGGFGMMSRKYGLAA-DNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEM......................... 326
39 -10.6004o95_A mol:protein length:524 Cytokinin dehydrogenase 4  ali model follow..  13  11.AELLQLGGGDVGGGRLSVDASDIAEASRDFGGVMAVFHPRAAGDVAGLVGAASARGFRVSARGHGHSISGQAQAAGGVVVDMSRPVHSAALGGHYVDVWGGELWVDVLNWTLSHGGL-----LSVGGTLNAGISGQAFHHGPQI-SNVYELDVVTGKGEVVTCSETENPDLFFGVLGGLGQFGIITRARIALERAPK....................................................................................................... 231
40 -10.2003vte_A mol:protein length:518 Tetrahydrocannabinolic acid synthase  ali model follow..  15  56...................................VIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAYISQVP--FVVVDLRNMHSKIDVHSQTAWVEAGATLGEVYYWINEKN-GGYCPTVGVGGFSGGGYGALMRNYGLAA-DNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFN.................................................................................. 247
41 -9.5702ipi_A mol:protein length:521 Aclacinomycin oxidoreductase (AknOx)  ali model follow..  14  11.EFDGGACGARTALVKVYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCF-FVDDPAVRAVIDMSQMRQFYDSGKRAFAVEPGATLGETYRALYLDW-AGVCPQVGVGGVLGGGYGPLSRRDGVVA-DHLYAVEVVVVDASGRARPNRELWWAHTGG---GGNFGIVTRYWFRTPG.......................................................................................................... 224
42 -9.5203pop_A mol:protein length:501 GilR oxidase  ali model follow..  14  2.....SHMTASVPPFTVGRIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCG-FVGTPRRDLVLDLHNLHAGPAADGAGVRVGSGATVDQVQKALFRRW-LGACSAVGMGGVAGGGYGPLSRQLGLVV-DHLHAVEVAVVDESRTVRDLGELFWAHTGG---GGNFGVVTAYEFRSPE.......................................................................................................... 210
43 -9.5202y08_A mol:protein length:530 TAML  ali model follow..  14  14.NLYFQGSEFMKHIDSVAPEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAVGFDRGAFAVEAGATLGAVYKTLFRVW-GGACPDVGAGGILGGGYGPLSRMHGSIV-DYLHAVEVVVVDASGDARPNHDLWWAHTGG---GGNFGVVVRYWLRTAEADVPPEPGRL................................................................................................ 236
44 -9.5105i1v_A mol:protein length:500 CrmK  ali model follow..  12  17...................DLLARADNYRFVAQPEYFRLPYSTAQVVEAVSEAVAAGKRLTVRSGGHCGEAFVASPDVDVIVDLSSMSHVGYDRGAFEVEAGATVGQIYRVLYKNY-GGFCMGVGAGGISGGGYGPLSRLLGLTV-DYLHAVEVVVVDAEGVVSTNRDLWWAHTGG---GGNFGVITRYWLRSPDAVGDAPEEAL................................................................................................ 216
45 -9.3302wdw_A mol:protein length:523 PUTATIVE HEXOSE OXIDASE  ali model follow..  11  38.............DDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEIAYDMNAFLIEPGNTLSEVYEKLYLGW-GGVCGGVGVGGICGGGYGPLSRQFGSVV-DYLYAVEVVVVNKQGKARPHHDLWWAHTGG---GGNFGVVTKYWMRVPE.......................................................................................................... 233

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.