Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP05463 spore coat-associated protein [Bacillus anthracis str. Ames] BA_1288 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .
# Score Template Links and tools%idFirst MTLKKKLGMGIASAVLGAALVGGGTFAFFSDKEVSNNTFATGTLDLALNPSTVVNVSNLKPGDTVEKEFKLENKGTLDIKKVLLKTDYNVEDVKKDNKDDFGKHIKVTFLKNVDKHETIVKETALDKLKGDTLTAVNNDLAAWFWDEKGISAGKSDKFKVKFEFVDNKKDQNEFQGDKLQLTWTFDAQQGDGETKLast
1 -46.4005of1_A mol:protein length:210 Spore coat-associated protein N  ali model follow..  27  1.............................NDIKSKDATFASGTLDLSAKENSSVNLSNLKPGDKLTKDFQFENNGSLAIKEVLMALNYGDFKANGGSNTSPEDFLS-KNDAAAAEKIKKQIDPKFLNASGKVNVATIDGKTAPEYDGVPKTPTDFDQVQMEIQFKKGLMVQNKYQGNSIKLQFSFEATQWNGLT. 208
2 -11.4005axg_A mol:protein length:618 Dextranase  ali model follow..  16  1MGKKIIALILIISTAIFGALYMYRNIFSFKDDNNIVALTKGKLIDVYTDKAR------YYPSDKVTVKIELNNELQEDFRGTIYIFYKHLESIVGKAKIQV-----------------------------------------------NIKSGQKKQLNIFWEAP-----KDDFKGYLVEVYAVKGNKAIDNKN. 137
3 -9.6806h7w_J mol:protein length:292 Vacuolar protein sorting-associated protein 26-like protein  ali model follow..  11  1............................FSTPVDIDIVLADAMVDVKLDKNRREKVPLYMDGESVKGCVTVRPKDGKRLEHTGIKVQFIGTIEMFFDRGNHYEFLSLVQELAAPGE-------------------------------------LQHPQTFDFNFKNVEKQYESYNGINVKLRYFVRVT....... 127
4 -9.3206cfw_F mol:protein length:148 Monovalent cation/H+ antiporter subunit B  ali model follow..  11  1MNEDMGVIVRTNARALIPFIGIFGAYIVTHGHLTPGGGFQGGAT....................................................................................................................................................... 44
5 -9.0005cl2_A mol:protein length:252 Sporulation-control protein spo0M  ali model follow..  10  2...................................SHMAGIGAAKVDTI----LEKDAYFPGEEVQGTVHVKG-GKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVTGS----------------------------------FTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKS. 121
6 -8.9905opq_A mol:protein length:693 3,6-anhydro-D-galactosidase  ali model follow..  13  1MKNNSTVAKSTLVLLVVTCLTAFKGLAFDSISPDP--VLENGKLNINIDSKTCFSVTEKTSGHVWKSDPWENAAGLLTLT---------------------------------DSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDPVFEDGSVAKGVSIATEL--------RLDPNNAQLDVEVTEHRSGNFT. 153
7 -8.5502wto_A mol:protein length:131 ORF131 PROTEIN  ali model follow..  15  1MKTKKHALLFAALLLGGMSAPGVPASTATAQAMAKRHATLYGIIDVKPGMRYV----NVDSGET----VAFRAGEK....................................................................................................................... 88
8 -8.4405n1t_M mol:protein length:160 CopC  ali model follow..  11  1MYATKPGLARLAPAVLAAAVFVATPGTADAHAHLRAADPPEAIV-------------AAGL-----REIRLVFSEPVVDRFSTFRAFRLSLPENGIRNLTQLNTLASELGVDTEESAHHEVELESDLSSQSAEVTLH---------DEPLPAGA-----YAVVWRVLSVDGHTTTG-----FHAFVHAGGTASSH 160
9 -8.3004be5_A mol:protein length:262 RBMA  ali model follow..  11  1....................MGSSSSGLVPRGSHMEVDCEL-EANLSLNQNQL-----ASNGGYISSQLGIRNESCETVKFKYWLSIKGPEGIYFPAKAVVG-------------------------------------VDTAQQESDALTDGRMLNVTRGFWVPEYMADG--------KYTVSLQVVAENGKV. 127
10 -8.2404yah_X mol:protein length:279 D-methionine-binding lipoprotein MetQ  ali model follow..  24  1MAFKFKTFAAVGALIGSLALVGCGQDE-FNDYVLPNEALSKGDIDANAFQHKPYSLDELQDGSQVAVPNDPTNLG........................................................................................................................ 143
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;