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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSELast
1 -83.6003u80_A mol:protein length:151 3-dehydroquinate dehydratase, type II  ali model follow..  100  4MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSE 151
2 -76.1001v1j_A mol:protein length:157 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  37  8.APIMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGL--PVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAGA 152
3 -76.0004ckw_A mol:protein length:146 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  50  3.LIVNVINGPSLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELS---APLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHLGT 146
4 -75.3001gqo_A mol:protein length:143 DEHYDROQUINASE  ali model follow..  40  1.PHFLILNGPNVNRLGSREPEVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSIS---LPVVEVHLSNLYAREEFRHQSVIAPVAKGQIVGLGAEGYKLAVRYLLSQQ.. 142
5 -75.2001uqr_A mol:protein length:154 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  39  1MKKILLLNGPNLNMLGKREPHIYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPGAFTHTSVAIRDALLAVS---IPFIEVHLSNVHAREPFRHHSYLSDVAKGVICGLGAKGYDYALDFAISELQK 145
6 -75.2004kiw_A mol:protein length:167 3-dehydroquinate dehydratase  ali model follow..  50  18.LIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELS---APLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT 161
7 -75.0003n59_A mol:protein length:172 3-dehydroquinate dehydratase  ali model follow..  49  22ELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELS---APLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT 166
8 -74.8003lwz_A mol:protein length:153 3-dehydroquinate dehydratase  ali model follow..  36  8.FHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQ---IPFIEIHLSNVHAREPFRHHSYLSDIAVGVICGLGADGYNFALQAAVNRLSK 151
9 -73.2003kip_A mol:protein length:167 3-dehydroquinase, type II  ali model follow..  34  8VKKVLLINGPNLNLLGTREPEKYGTTSLSDIEQAAIEQAKNNDSEVLVFQSNTEGFIIDRIHEAKRQVGFVVINAGAYTHTSVGIRDALLGTA---IPFIEVHITNVHQREPFRHQSYLSDKAVAVICGLGVYGYTAAIEYALNYQLD 155
10 -71.8004rc9_A mol:protein length:151 3-dehydroquinate dehydratase  ali model follow..  36  2SSTILVIHGPNLNLLGKREPEVYGHLTLDNINRQLIAQAEQASITLDTFQSNWEGAIVDRIHQAQTGVKLIIINPAALTHTSVALRDALLGVA---IPFIEVHLSNVHAREAFRHHSYLSDKAIGVICGLGAKGYSFALDYAIEKIQP 147
11 -70.7006cv6_A mol:protein length:166 3-dehydroquinate dehydratase  ali model follow..  36  14MKKVLMLHGINHNMFGKRDPVQYGTITLSEIDNRLQALAAELGVQVESFQTNSEGAMCERIHQAEERCDAVLINAGAWTHYSYGIRDALAILT---CPVVELHMSNVHAREPFRHHSVFSEVVVGQICGFGMESYLLALRAAVAQSGC 159
12 -70.4004l8l_A mol:protein length:145 3-dehydroquinate dehydratase 1  ali model follow..  38  2.GTLLVLHGPNLNLLGTREPGTYGSTTLGQINQDLERRAREAGHHLLHLQSNAEYELIDRIHAARDEVDFIIINPAAFTHTSVALRDALLAVS---IPFIEVHLSNVHKREPFRHHSYFSDVAVGVICGLGATGYRLALESALEQLQ. 145
13 -70.1002c57_A mol:protein length:180 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  37  7HMKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQLDVELEFFQTNFEGEIIDKIQESVGDYEGIIINPGAFSHTSIAIADAIMLAG---KPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAE 154
14 -69.3002c4w_A mol:protein length:176 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  38  10.MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQLDVELEFFQTNFEGEIIDKIQESVSEYEGIIINPGAFSHTSIAIADAIMLAG---KPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAE 156
15 -69.1002uyg_A mol:protein length:149 3-DEHYDROQUINATE DEHYDRATASE  ali model follow..  47  2...VLILNGPNLNLLGRREPEVYGRTTLEELEALCEAWGAELGLGVVFRQTNYEGQLIEWVQQAHEGFLAIVLNPGALTHYSYALLDAIRAQP---LPVVEVHLTNLHAREEFRRHSVTAPACRGIVSGFGPLSYKLALVYLAETLEV 144
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.