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Query: IDP90410 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_663 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MLEKLIKNFVAYMGVASELEFDADGSYVFPISSLVRMRVRQNADEEIIISAFLGEIPASMDIEKAYARMMEGNLFGQETGGAALGLDSDGHAVLVRRVPGEVSQEDFASYIESVLNYAEAWLEDLGLSKTEQELast
1 -41.200PF05932.13; Q87P37_VIBPA/6-126; Tir chaperone protein (CesT) family  ali follow..  13  2....LLDEFCRLNELP-PLILEDGNRCQLLVDDRFVLYFTATEDDAMLSVAFGGLEKSGELRVRGLELLARANYQRVGSGNLALSLAPNGRQLVLRQPTEHLNSANLTVWFHEIIEQTELWQ........... 121
2 -14.000PF07824.12; SIGE_SALTY/3-113; Type III secretion chaperone domain  ali follow..  13  1...SLLNRLYDALGLDAPEDEP-----LLIIDDGIQVYFN-ESDHTLEMCCPFMPLPDDILT---LQHFLRLNY----TSAVTIGADADNTALVALYRLPQTSTEEALTGFELFISNVKQLKEHYA....... 111
3 -11.700PF10722.9; D5UDP5_CELFN/56-183; Putative bacterial sensory transduction regulator  ali follow..  11  3...ARIASWMSDNQFS--YFIDNDGDLGGLWRGLFYFFLFGQQAEILQVRGQWHRELAIERLEEVLDLCNEWNAERIWPKAYVRVRDNGRVHVVAEVATHGATDAQLSQILFCGLSTGSMLFDALDE...... 128
4 -7.470PF15384.6; PAXX_MOUSE/10-205; PAXX, PAralog of XRCC4 and XLF, also called C9orf142  ali follow..  6  25.....................GDRDDFNLYVTDAAELWSTCFSPDSLARLKARFGLSGAEDIHSRFRAACQQQAVTVSLQEDRALITLSGDTPALAFDLSKVPSPEAAPRLQALTLSLAEHVCNLERRLAAAE 136
5 -5.920PF02458.15; F4IDH0_ARATH/11-443; Transferase family  ali follow..  16  57LKTALAETLVSYYAFAGELVTNPTGEPEILCNNRGVDFVEAGADVEL---RELNLYDPDESIAKLVHGVIAIQVTQLKCGSIVVGCTFDHRVA---------DAYSMNMFLLSWAEISR.............. 167
6 -5.440PF11192.8; Q4Z9C4_BPTWO/1-77; Protein of unknown function (DUF2977 topsan)  ali follow..  8  8................................AVDGYVLLLLDKNLITGYVTYGQAEPGMPQVIVHEDLLPKDFFKEFKVNKYKYYSSPEEIII....................................... 69
7 -5.210PF09938.9; A4XXS6_PSEMY/65-202; Uncharacterized protein conserved in bacteria (DUF2170 topsan)  ali follow..  16  4.AQALYDALAAT-QAGIELIQGADASLHVTMREYGDLPLFIAFGEQIIVEALLWPATDVKDAKAFNEEVLRTHLFPLSSIGLEKMVDGRDCYTMFGALSSSSTLSDVVFEIELLADNVIKATEAYEG...... 136
8 -4.790PF11769.8; D8MJN0_ERWBE/30-217; Protein of unknown function (DUF3313 topsan)  ali follow..  5  56LSQDDRRRLANYM----------HKKFGEVLAAKFTAPASSASGPSLRLKLTLTGADTTPQVIGTFTKFDLAGGPYNIVQSVRGGRGLMSGYVNYAVEVEDAQTHELLLAYSAAETGIDKGAEQL........ 188
9 -4.790PF11306.8; I4B705_TURPD/56-313; Protein of unknown function (DUF3108 topsan)  ali follow..  12  140.YQDLLGAFYYVRSTGRVPKVGEVLRVPVLPAGSRTLILKVLARETRNDIPFFGTVRSALADEAKGKGPAMGNVFFNTQSQIDMWITADADFVPVKIWTTMPYLGVANILLEQY................... 258
10 -4.770PF03519.14; W0HTY6_9GAMM/17-94; Invasion protein B family  ali follow..  11  9...................NFDSHSTIALDFNDMPSIYISSS-DDDIWLWSRIAEYQDTQCSYNLLKELLE.............................................................. 62
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;