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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSELast
1 -73.500PF01220.19; G8UL23_TANFA/3-138; Dehydroquinase class II  ali follow..  36  1..KIQIINGPNLNLLGKREPGIYGDVSFEDYLRQLRAACP--QCEITYFQSNSEGELLDKIHETGFVCDGIVLNAGAYAHTSIALHDAIKAVT---APVVEVHLSNIYARETFRHHSLLSPVCQGVILGFGMDSYRLAVEAL...... 135
2 -6.930PF00483.23; GLGC_SYNY3/15-285; Nucleotidyl transferase  ali follow..  9  114..EYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFSEKPQGEALRAMQVDTSVLGLSAEKAKLNPYIASMGIYVFKKEVEKYEGATDFGKEIIPDSASDHNLQAYLFDDYWEDIGTIEAFYE. 263
3 -6.610PF03786.13; UXUA_BACSU/1-351; D-mannonate dehydratase (UxuA)  ali follow..  10  184..........................NLSFFLQEILPVAEAYGVQMAIHPDDGEASYKKLRAISDSPSNCITLCTGSMGANP---NDMVEIAKTYAGIAPFSHIRNVKIYENGDFIETSHLTKDGSI-----------IQGVMEELHK 306
4 -6.390PF04187.13; F8GFP7_NITSI/61-278; Haem-binding uptake, Tiki superfamily, ChaN  ali follow..  11  5......AAKASVVLLGETHVNADHHRWQLQTLVALHAVRPNMVIGFEMFPRRVQAVLDKWVAGELTEKEFL---DRVWNTDANLYLPLFHFARMNHIPMRALNIEASLRRLVSEK................................. 115
5 -6.310PF10087.9; H6LKA6_ACEWD/2-91; Uncharacterized protein conserved in bacteria (DUF2325 topsan)  ali follow..  19  1..SIVIIGG-------------------DRMVYQYKDLCKEYHCRAKVFTQMQGA-----MKKKIGAPDLIVLFTGTVSHK--MVNCATFEAKRLNLPLARSHTSSLNA....................................... 82
6 -5.970PF15433.6; F7DHT5_CALJA/96-390; Mitochondrial 28S ribosomal protein S31  ali follow..  13  156.....LFKGKRLYIFDMTATAKEDSETDTSPSLWDVEFAKKLATVNEQPLQNGFEELIQWTKEGK------INNEAGFDDDGSEFHEHI---------FLEKHLEGFPKQGPIRHFMEL------VTCGLSKNPY-LSVKQKVEHIE. 280
7 -5.750PF08937.11; A1W964_ACISJ/3-116; MTH538 TIR-like domain (DUF1863 topsan)  ali follow..  13  7......................FHYQRDSWRASKIRNIGVVEGNQPEEVKRGGEAAIKRWIDDQLQGRTCTIVLVGAETANRPWIRYEIEQSWNSGKGLLGIRVHKLLDHN..................................... 101
8 -5.730PF10662.9; A6TJW6_ALKMQ/1-140; Ethanolamine utilisation - propanediol utilisation  ali follow..  14  1MKKVILVGRTGS-----------GKTSLQRLNQQELIYKKTQAMEFSDRVLDTPGEYIEAIISASADCDVIGILQAIDEPNCIFPPGFGNFFNKPVIGIIDLEHDSGNVESDLYAAGAQQIFRISAVTGEG-------LEELRVYMEE 140
9 -5.580PF11977.8; Q5TX22_ANOGA/399-550; Zc3h12a-like Ribonuclease NYN domain  ali follow..  11  1MKRMVIIDGNNVAYGHLNG-KMFSVKGLELCINYFKKLGFEVTAVVPQFKLKRYQSTDQALLEQMHRNGDVTLAPCKSLPGQCSSSYDDRLILSIAEQFDGVIISNDNFRDLLDISPEWRRIIETRVVGY.................. 129
10 -5.540PF04267.12; Q0BW23_GRABC/3-84; Sarcosine oxidase, delta subunit family  ali follow..  9  1.....LITCPYCGQRPELEFTYGGEAHLVRPADP-AMLSDEEWTAYLYMRSNPKGEHAERWRHAHGCGRFFNAVRDTRTDVILSTYK............................................................. 81
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.