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Query: IDP91676 DNJA3_HUMAN [Homo sapiens], from CSGID

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAARCSTRWLLVVVGTPRLPAISGRGARPPREGVVGAWLSRKLSVPAFASSLTSCGPRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTSLast
1 -69.900PF01556.18; T0NBZ6_9EURY/129-343; DnaJ C terminal domain  ali follow..  27  1................................................................................................................................................................................................................LLTNLRISLEDAYYGAKKTIKYRRNAECQTCHGTGSKDGK-LVTCKDCNGTGQQRVVQFRMVTVTTCKTCGGRGKVPSVVCPDCHGTGSVPVTENLEITVPKGAPDRLRLRIKGKGGDLYVVLNVEETPGMKRINDDIYIVEEIGFPEAALGVEKEIKLFRETLTFKIPAGTQPGEVLRIKGAGFQHMNGRGSGDVLVEIKVAVP................................................................... 215
2 -38.000PF00226.31; Q22028_CAEEL/17-79; DnaJ domain  ali follow..  57  1............................................................................................DFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDPNKRRQYD..................................................................................................................................................................................................................................................................................................................................... 63
3 -27.700PF00684.19; DNAJ_LACP7/149-213; DnaJ central domain  ali follow..  40  1...........................................................................................................................................................................................................................................CETCHGSGAKPGSSAETCHKCNGKGQVTFTQGMVRNVQTCPDCRGTGKIIKEKCPDCYGSG........................................................................................................................................................................................ 65
4 -20.200PF03656.13; TIM16_CAEEL/1-135; Pam16  ali follow..  17  58....................................................................................AKLGISLEESLQILNVKTPLNREEVEKHYEHLFNINDKSKG----GTLYLQSKVFRAKERIDEEFGRIELKEEKKKEENAKT.......................................................................................................................................................................................................................................................................................................................... 135
5 -19.100PF15777.5; Q65NU7_BACLD/1-52; Tryptophan RNA-binding attenuator protein inhibitory protein  ali follow..  20  1.......................................................................................................................................................................................................................................................................MVIATDDLETTCPNCNGSGREEPEPCPKCSGKGVILTAQGSTLFIKKHLN....................................................................................................................................................................... 52
6 -12.600PF14537.6; D4H4F3_DENA2/139-220; Cytochrome c3  ali follow..  18  8..........................................................................................................................................................................................................................................FCNGCHGIALPSEVSNVTCLGCHGELKALQKKTESAEDIACTVCHHIHTEQTAYCVNCH........................................................................................................................................................................................... 81
7 -11.000PF04216.12; B4EFM8_BURCJ/22-308; Protein involved in formate dehydrogenase formation  ali follow..  10....................................................................................ERATAFAARAARLRKLADLNPISGYLRLMATVADATLQALELPLPSKEAIARAQEHSMPLVPDARWRAVLYELLDRVESAGLVNPQLAKLLDRLRLMAPAELDAQADAILALRFAEVDPATAPFLMAALQVAWTDLASRVTPTDVPYLDQPCPVCGTGGQYQGYRFLQCGLCTTEWHMV--------RTKCSHCDSTKGI--ESCDECKTYRKIGYQEKDY-EFEPLADDLASLTL-----DL-----LMNEAGYQRSSPNPL..................................................................................................................................... 285
8 -10.400PF05458.12; SIVA_HUMAN/1-175; Cd27 binding protein (Siva)  ali follow..  12  1...................................................................................................................MPKRSCPFADVAPLQLKVRVSQRELSRGVCAERYSQEVFEK-GAQAYLDHVWDEGCAVVHLPESPKPGPTGAPRAARGQMLIGPDGRLIRSLGQASEADPSGVASIACSSCVRAVDGKAVCGQCERALCGQ---VRTCWGCG--------------SVACTLCG-SDMYEKVLCTSCA........................................................................................................................................................................................... 171
9 -10.400PF02085.16; Q6XCI5_DESBA/13-115; Class III cytochrome C family  ali follow..  15  25....................................................................................................................................................................................................................................SKHATVECAQCHHEADGGAVKKCTTSGCHDSLEFRDKANAKAYHTQCIDCHKALKKDKKPCGKCH........................................................................................................................................................................................... 103
10 -9.620PF12773.7; A4H9B2_LEIBR/373-437; Double zinc ribbon  ali follow..  20  1...........................................................................................................................................................................................................................................CQHC---GEDIPRGSCFCGTCGQPPGGTNEGVSTARRLVCPACEALSDADGNFCDNCG........................................................................................................................................................................................... 65
11 -9.520PF17032.5; J9D3W3_EDHAE/30-102; zinc-ribbon family  ali follow..  20  3...........................................................................................................................................................................................................................................CDKCGNRRISKGTPYLSCNYCEAS----------HGTNICEDCRTAVPSQFKYCPHCG........................................................................................................................................................................................... 73
12 -9.290PF03264.14; Q87GW4_VIBPA/15-185; NapC/NirT cytochrome c family, N-terminal region  ali follow..  17  31......................................................................................................................................................................................................................................NTEEFCSGCHAPYSNRSGVRAICSDCHVLAEREWARMKKNDSLECRNCHEFDYMGDKTCVDCH-KGIAHKLPDM................................................................................................................................................................................ 171
13 -9.290PF12660.7; S7ZRM5_PENO1/600-697; Putative zinc-finger of transcription factor IIIC complex  ali follow..  17  1..............................................................................................................................................................................................................................AQFSGPGAHLFERCEICDAGISWTSANDARCVECGLSFLAIQEPG---LSKYCSLCRTEYINEEDTCLYCGGK......................................................................................................................................................................................... 97

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.