current user: public

If you have questions about the server, please let us know.

Query: IDP05145 hypothetical protein BAS4679 [Bacillus anthracis str. Sterne] BAS4679 [Bacillus anthracis str. Sterne], from CSGID

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .
# Score Template Links and tools%idFirst MGLMAGCDSSMKSVKEKGICKTEEECVEIGDKKLQKVYEKIDGLSELEAVGDYDIEEHESADMKEAEQKKEDDDESYFFLASYYIDGDEIVDPYFEKIERKRLNKVFAEDKEVKEEVLQQRQDRGYHEDLWDMYRTLIPAKYRGNITEFDLITDGYDGVVAHVMLSIENPKDWTLSLDTLDSAVNIDEVMKTLIHETAHVLTLGHKQIPVDENYIKDFEEDKDISTYRNKCGNLFLQEGCAKENSYIHQFYNSFWKSIEQEWTEKKVEESEETQIEFFKEKHDEFVSQYGTTNVAEDIADTFTAFILQDSKKVKEGTELKYKKIAFFYQFPELVKMRAEVLSGLYDISKTVEQQSGNLast
1 -18.100d4dv8a2 d.92.1.14 (A:551-776) automated matches {Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]}  ali model 3D-neighbors follow..  18  115.............................................................................................................................................................................SILLHGPSKGVELRNDSEGFIHEFGHAVDDYAGYLLDKNQSDL----------------------------TNSKKFIDIF-------------------------KEEGSNLTSYGRTNEAEFFAEAFRLMHSTDHAERLKVQKNAPKTFQFINDQ........................... 219
2 -14.500d1j7na1 d.92.1.14 (A:27-263) Anthrax toxin lethal factor, N- and C-terminal domains {Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]}  ali model 3D-neighbors follow..  10  23.......................................................................................................................KGEEAVKKEAAEKLLEKV-PSDVLEMYKAIYIVDGGKDALLHEHYVYAKEGYEPVLVIQSSEDYVENTEKALNVYYEIGKILSRDILSKINQPY----------------------------------QKFLDVLNTIKNASDSDGQDLLFTNQLKEHPTDFSVEFLEQNSN-EVQEVFAKAFAYYIEPQH--RDVLQLYAPEAFNYMDKFNEINLSLEELKDQ.............. 236
3 -10.500d1c7ka_ d.92.1.1 (A:) Zinc protease {Streptomyces caespitosus [TaxId: 53502]}  ali model 3D-neighbors follow..  14  19............................................................................................................................ANAAQIWNSSVRNVQLRAGGNADFSYYEGNDSRGSYAQTDGHGRG------YIFLDYQQNQQYDSTRVTAHETGHVLGLPDHYQGPCSEL............................................................................................................................................... 102
4 -9.300d3e11a1 d.92.1.17 (A:1-113) Uncharacterized protein Acel_2062 {Acidothermus cellulolyticus [TaxId: 28049]}  ali model 3D-neighbors follow..  15  3........................................................................................................................YVDPDRFDELVAEALDGIPEEFARAMRNVAVFVEDEPDDLTERTTAYGGVLPDRIII-CETESEVIDEVRKTVVHEIAHHFGIDDERLHE................................................................................................................................................... 110
5 -9.260d2ejqa1 d.92.1.17 (A:2-108) Uncharacterized protein TTHA0227 {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  11  1..........................................................................................................................TYEAFVELVERLWEEVPEDFKRGLQGVHVFPEAKLDPGPPSAFGGFEDLGRHIAL-AGEGFDWEAEVWETMLHELRHHLESLAGR...................................................................................................................................................... 106
6 -8.240d4i43b3 c.52.1.36 (B:1653-1838) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 559292]}  ali model 3D-neighbors follow..  3..........................................................................................................................................................................................QKIHESIVFDICQILSVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPT---DLA--YNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSS....... 177
7 -7.730d1eb6a_ d.92.1.12 (A:) Fungal zinc peptidase {Aspergillus oryzae, deuterolysin [TaxId: 5062]}  ali model 3D-neighbors follow..  11  46........................................................................................................................TTDQQTRTTVAERLRAVAKEAGSTSGGSTTYHCNDPYGYCEPNVLAYTLPSKNEIANPPLAQKCHAQDQATTTLHEFTHAPGVYQPGTED----------------------------------------------------------------LGYGYDAATQLSAQDALNN-----ADSYALYANA................................................. 172
8 -7.660d5d7wa1 d.92.1.0 (A:4-246) automated matches {Serratia marcescens [TaxId: 615]}  ali model 3D-neighbors follow..  79.......................................................................................................................SAEQQQQAKLSLQSWADVANITFTEVAAG----GHYDYGTQAYATIWQGQDLGGQTWYNVNQSNVKHPATRQTFTHEIGHALGLSPGDYNAGEGNPTYNDVTYAEDTRQFSLMSYWSETN-----------------------------------------TGGDNGGHYAAAPLLDDIAAIQHLY.................................................... 243
9 -7.210d3edha_ d.92.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  53..................................................................................................................................................DSYIVFTYRPCGCCSYVGRRGGGPQAISIGKNCDKFG--------IVVHELGHVVG-------------------------------FWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEPQEVESLGETY------DFIMHYARNT----FSRGIFLDTIVPKYEVNGVKPPIGQRTRL--SKGDIAQARK................... 195
10 -6.830d1g12a_ d.92.1.12 (A:) Fungal zinc peptidase {Grifola frondosa [TaxId: 5627]}  ali model 3D-neighbors follow..  16  47........................................................................................................................SYISSRHSTVLQHYTDMNSNDFSSYSFD----TCTAAGTFAYVYPNRFG----TVYL-WKAPTTGTDSQAGTLVHESSHFTRNGGTK-----------------------------------------------------------------------YAYGQAAAKSLATMDPDKAVADNHEYFSEN................................................. 162

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.