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Query: IDP92021 adenosine/AMP deaminase domain containing protein [Toxoplasma gondii ME49] TGME49_005720 [Toxoplasma gondii ME49], from CSGID

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSPSATLPSFEEIASLPKIELHAHLFGSIRVPVLEEIRQRAAEEHKQTTESCYGANADEAAANVARIEGKCIDIGDAFAYFSAVYEIVRRKDDIVYALRRVLEDFSQDNVVYLELRTTLKTIPEEGIDPDNYVALLVEELKSAEKQYPMIVRLILSLNRSRLTSEVETREETVKILDLVAKYPEWIVGVDIAGDPRKGNILPALEVLEKEVMNPSGAHHGKLKVTVHTSEVEGSEKETKAVLKLAPHRIGHGCYLAVDQREFLLKEKICVEICPSSNMCTLNLRDLKDHPFSYYYGKKVLSNAVCICTDDIGLFDTSLSKELHVLSQAYNLSLSDVMDLQRSALAAAFCRDEDKAKIEEKFFRPHILast
1 -91.900d3rysa_ c.1.9.0 (A:) automated matches {Arthrobacter aurescens [TaxId: 290340]}  ali model 3D-neighbors follow..  18  1..........TTSTAPPVAELHLHIEGTLQPELIFALAERNGIELPYED------------IEELREKYEFTDLQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSA------LEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFE-------RLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDHGIRCMEDTVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGL---NVCVNSDDPAYFGGYVDDNFEQLVKVLEFSVPEQATLAANSIRSSFASDARKAVLLDEVTEWV. 329
2 -87.400d2pgfa_ c.1.9.1 (A:) automated matches {Plasmodium vivax [TaxId: 5855]}  ali model 3D-neighbors follow..  19  17LSQMSKKERYKIWKRIPKCELHCHLDLCFSADFFVSCIRKYNLQPNLSDEEVL---------DYYLFAKGGKSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHE----AANIKASADFCLKHKADFVGFDHGGHEV---------DLKEYKEIFDYVRESGVPLSVHAGEDVNLNTLYSAIQVLKVERIGHGIRVAESQIDMVKEKNILLEVCPISNVLLKNAKSMDTHPIRQLYDAGV---KVSVNSDDPGMFLTNINDDYEELYTHLNFTLEDFMKMNEWALEKSFMDSNIKDKIKNLY..... 358
3 -86.500d3iara1 c.1.9.1 (A:5-363) Adenosine deaminase (ADA) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  22  2............AFDKPKVELHVHLDGSIKPETILYYGRRRGIALPANTAEGL---------LNVIGMDKPLTLPDFLAKFDYYMPIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRHQPNWSPKVVELCKKY------QQQTVVAIDLAGDETIPGSSL----LPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQA---NYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDLLYKAY. 347
4 -60.500d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  13  234VDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNL--------------IQGRFLGEITKQVFSDLEASKYQMAEYRISIYGRKMSEWDQLAWIVNNDLYSENVVWLIQLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPDSHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAFNPAFSYYVYYCYANLYVLN-------KLRESKGMTTITLRPHSGEAGDIDHLAATF--LTCHSIAHGINLRKSPQYLYYLAQIGLAMSPLSNNSL--FLDYHRNPFPVFFLRGL---NVSLSTDDPLQIHEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDYYKR. 584
5 -19.700d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  12  1................P-IDCHTHLGGNRAMEFEMRLNGATYEEIA---------------------------KAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETEL---KMLRVARRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFCEGIAFSVKEID-------RVFAAAQQRGLPVKLHAEQLSNLGGAELAA-SYNALSADHLEYLDETGAKALAKAGTVAVLLPGAFYALRE-------PVQALRDAGA---EIALATDCNPGTSPSLLLTMNMGATLFRMTVEELTATTRNAAKALGLLAE.............. 298
6 -17.700d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]}  ali model 3D-neighbors follow..  11  1................P-VNAHTHLDMSA-------------------------------------YEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTR---------------------LGAGGVGDIVWAPEVMDALLAREDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLERPGLRLGLS------PHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTPVRYLDELGVLAARPT-HMVNVTPDDIARVARAGCAVVTCPRSNHHLEC----GTFDWPAFAAAGV---EVALGTDSVASGETNVREEVTFARQLYGLDPRVLVRAAVKGGQRVV.................. 303
7 -17.000d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  10  1................PFVEPHIHLDTTQTAGQPNWN--------------------------------QSGTLFEGIERWAERKALL-THDDVKQRAWQTLKWQIANGIQHVRTH----------VDVSDATLTALKAMLEVKQEVAPWIDLQIVA---FPQEGILSYPNGEALLEEALRLGADVVG-------IPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHASHTTAMTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYP-RVKEMLESGI---NVCFGHDGVF--TANMLQVLHMGLHVCQLMGYGLNLITHHSARTLNLQD............... 310
8 -16.200d4aqla2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  1................P-VDTHIHASQYSFAGSSIDL-----------------------------------PLLEWLTKYTFPAEHFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIH---------TDSSLLLADITDKFGQRAFVGKVCM-DTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVT------PRFSLSCSETLMGELGNIAKTRDLHIQSHISENKNYTSVYDKNNLLTNKTVAHGCYLSAEELNVFHERGASIAHCPNSNLSLSS-------NVLEVLKHEV---KIGLGTDVAGGYSYSMLDAIRRAV........................................ 272
9 -15.900d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  16  3..................FNTHTHAPMTLLRGVAEDL-----------------------------------SFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAFVDMYFHE------------------EWIAKAVRDFGMRALLTRGLV-DSNGDDGGRLEENLKLYNEWNGFEGRI-------FVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIGL--AAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGN-------PVQRMIEHGM---KVTLGTDGAASNNSNLFFEMRLASNPRNLDVNTCLKMV.......................... 268
10 -14.100d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples [TaxId: 33858]}  ali model 3D-neighbors follow..  14  1................P-VNTHHHLFQSL----LKGEPAGLDAT-----------------------------LTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCAVADHNY---------VYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEAETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPGEHDHLVKVDADEIALLAQTGTGVAHCPQSNGRLGS-------PVREMADAGV---PVSIGVDGAASNEADMISEVHMTW........................................ 285
11 -13.000d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}  ali model 3D-neighbors follow..  14  1................P-IDGHIHL------------------------------------PQTRVLGAYGEQLLPWLQKSIYPEEIYKDRNYAREGVKRFLDALLAAGTTTC-------------QAFTSSSPVATEELFEEASRRNMRVIA-TGIDRNAPAEFIDTPENFYRDSKRLIAHDKGRNLYAITPRFAFGASPELLKACQRLKH-----EHPDCWVNTHISENPAE-GVYEKFDLVGPKFSGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGS-------RLGRATDPE-HRVKMSFGTDVGGGNRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTL 311
12 -11.700d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}  ali model 3D-neighbors follow..  12  1................P-INAHTHL-----------FSQGKPLNPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEART------------------AVAQNLKAGVNAIKIAAT--------GVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHA----SPEGVRRSLLA-GVDTIEHGSVLDDELIGMFRHNPNALRLIPTLSANSKNVVGGMVSGARQAHEAGL---MIGVGTD-TFVPQYATWRELELLVAYAGFSPAELHAATAVNASILGVDAE.............. 321
13 -10.500d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]}  ali model 3D-neighbors follow..  11  3..................MDMHVHFGQEYQSKAQAPIKVEREM---------------------------------------QAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAG--PRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHA----GAEGMKRAIKA-GVDSIEHGTFMDLEAMDLMIENGTYYFFPEIVRPKAASVGPQISDTFRKAYEKGV---KIAFGTDAGVQKHGTNWKEFVYMVENGMPAMKAIQSATMETAKLLRIEDK.............. 308
14 -10.300d2y1ha1 c.1.9.0 (A:5-272) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  1..............GVGLVDCHCHLSAPDFDRDLDDVLEKAKKA---------------------------------------VVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ------------------------------------GLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRAKRLNLPVNVHSRSAG--RPTINLLQEQGAEKLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQKQKLVKQLPLTSIC----------LETDSPALG-WNISISAEYIAQVKGISVEEVIEVTTQNALKLF.................. 261
15 -9.700d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}  ali model 3D-neighbors follow..  11  3..................IDDHVHCFEK------------------------------------------------------------------ALYYDYPDEIGVKKGVTTV---------IDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIKARMSRTVIGDNGITPLELAKQIQ---QENQEIPLMVHIGSAPPHLDEILALME-KGDVLTHCFNKIKDFAWQAYNKGVVFDIGHGTD-------SFNFHVAETALREGMK--AASISTDIYI--VYDLATTMEKLRV-VGYDWPEIIEKVTKAPAENF.................. 261
16 -9.680d3mkva2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}  ali model 3D-neighbors follow..  11  3..................IDLHVHVVAI-----------------------------EFNLPRVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFKQAVESGLVEGPRLFVSGRALSQTG-----------ADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGSPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHA----TPAAIARAVRC-GVRTIEHGNLIDDETARLVAEHGAYVGLPPESIAKIADVHGAGLHSIEIMKRAGV---KMGFGTDLLGEAQRLQSDEFRILAEVLS-PAEVIASATIVSAEVLGMQDK.............. 309
17 -9.320d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  6..................IDTHCHFD-----------------------------------------------------------------PPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAAL-------------------HPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAMHLKRHDLPRTGHGFSGSLQQAERFVQLGYKIGV-------GGTITYPRASKTRDVIAK-LPLASLLLETDAPDM--EQAARVFAVLCELRREPADEIAQALLNNTYTLF.................. 256

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.