|
current user: public |
|
Query: IDP05463 spore coat-associated protein [Bacillus anthracis str. Ames] BA_1288 [Bacillus anthracis str. Ames], from CSGID |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . | |||||||
# | Score | Template | Links and tools | %id | First | MTLKKKLGMGIASAVLGAALVGGGTFAFFSDKEVSNNTFATGTLDLALNPSTVVNVSNLKPGDTVEKEFKLENKGTLDIKKVLLKTDYNVEDVKKDNKDDFGKHIKVTFLKNVDKHETIVKETALDKLKGDTLTAVNNDLAAWFWDEKGISAGKSDKFKVKFEFVDNKKDQNEFQGDKLQLTWTFDAQQGDGETK | Last |
1 | -11.000 | [P] COG4454 Uncharacterized copper-binding protein | ali follow.. | 20 | 1 | M---TRLKLALLLTALATPAFAGGTHSGGDNVMAIGEPGDKSTIQVTMKETPDGKMMEFKKGKTVR--FAVKNVGELDHEFIL................................................................................................................ | 88 |
2 | -10.200 | [S] COG4719 Uncharacterized protein conserved in bacteria | ali follow.. | 10 | 8 | VKTHLTLTALALTSVSFAAQAAPAATSPIKLSGATYSVAQVTENGKTTERLVDASGKGALPGSLLQMTQKVQNVSARSVN................................................................................................................... | 87 |
3 | -10.100 | [P] COG2032 Cu/Zn superoxide dismutase | ali follow.. | 12 | 1 | MNMKTLLALAVSAVCSVSVAQAHEHNTIPKGASIVNGNKDVGTVTITESNYGLVDLQGLSEGLHG---FHIHENPSCE..................................................................................................................... | 87 |
4 | -10.000 | [C] COG3241 Azurin | ali follow.. | 13 | 1 | ...MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAATVESNDNMQFNTKDIKACKEFT--ITLKHTGTQPKTSMGHNIVIGKTEDMDGIFKDGVGA--------------------------ADTDYVKPDDARVVAHTKLIGGGEESSLTLDPA---KLADGETFPGHGALMNGKVTLVD...... | 183 |
5 | -9.290 | [S] COG3863 Uncharacterized distant relative of cell wall-associated hydrolases | ali follow.. | 14 | 1 | MKLKKRVSMFLVALTMCGGLFVTPAKAVKTTNYAEEIAALQPGTTPE-GSSGTKKLPTSAKGN-----IYYTNSYT....................................................................................................................... | 118 |
6 | -8.980 | [S] KOG3306 Predicted membrane protein | ali follow.. | 8 | 7 | IRSSPTLAFIVLQICFIFFASTFPCSSGSEDSYTITGRVKIPKVILNLRPDGYFTFHEVPAGTFSPVRVDVSARHRGKVQATLTETRRS.......................................................................................................... | 127 |
7 | -8.900 | [O] COG3175 Cytochrome oxidase assembly factor | ali follow.. | 10 | 20 | .GLNRAMLGKLAVVVVMMFGFGYAMYKKICELTNINVLTTRDTVEFDSNSQGPFRFREVHPGEINQIVYEVVNKEGRSVSAQAIPSYAPKQATEFFKKIE--------------------------------------------FKQQTLAGN--ESREMPVVFVIDPDLPKDVKTITLSYTF-FEIGKPVAQTP | 195 |
8 | -8.810 | [S] COG4633 Uncharacterized protein conserved in bacteria | ali follow.. | 12 | 46 | RRIEQPLWVKGAVTTVGLGLIGLEIWWFLLSKPKSDGGYEPSRILVNAGQRVRLNFLRLPLNEVTPIEFTSDKPGTYTFNCGMNMFRGVIEVQPTDSTAKATSVTTSQSTHQIQPELSLPTESATKAVKTPEGTQEATITVEKGYKPERVIVEVGQPVRLDFQRHNLSKCFDKLLIPDFDLAVNLAPNQT..... | 271 |
9 | -8.790 | [S] COG4939 Major membrane immunogen, membrane-anchored lipoprotein | ali follow.. | 19 | 1 | MKLKKVAMGITVVMASSLLLVGCGSSD--KKTAKTDGTMTDGTMSIEVKDGKITKAN.......................................................................................................................................... | 87 |
10 | -8.640 | [R] COG4326 Sporulation control protein | ali follow.. | 13 | 1 | MSFFKKLAASA--------------------------GIGAAKVDTILEKDA------YFPGEEVQGTVHVKG-GKIAQDIRYIDLQLSTRYVIVKDDEEHRKYATIHSFRVTGS----------------------------------FTIQPGEEHQFPFTFTLPLDTPITVGKVEVAVVTDLDIQGGIDKS. | 127 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5. |