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Query: IDP90401 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_579 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTGVRGDNAPDPSLLAQLTQNANSASAASTGKNGQVAGAKQENVDASFEDLLQDAQGTGGSKKATANQTSKSGKSEKAQASSGTSTTTSVAQASQTATAQAVHGARDSGFNSDGSATLPSPTGTEVNGVVLRKGMGTLALMGLIMTLLAQASAKSWSSSFQQQNQAIQNQVAMAPEIGNAIRTQANHQAQATELQAQQSLISGITNIVGFAVSVGGGILSASKSLGGLKSAAFTNETASATTSATSSLAKTATSALDDVAGTATAVGAKATSGAASAASSAATKLTQNMAESASKTLSQTASKSAGGLFGQALNTPSWSEKVSRGMNVVKTQGTRAAKFAGRALSSAMNISQMVHGLTAGIDGIVGGVIGAQVAQEQRMAGMAEARAEELKSLNSVQAQYASQAQQLQEQSQQSFNSALQTLQSISDSALQTTASMFNLast
1 -4.840[R] KOG2502 Tub family proteins  ali follow..  11  5.............SIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDLIVIKNTRWANLPAALLRDVMKKLDESESTVACAGVCKTWRLMCKDIVKSPEFSGKLTFPV-KQPGPRDGIIQCYIKRDKSNMTYHL---FLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSP----SRSFNSKKVSPKVPSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSSKIVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLR------------CLNFKGRVTVASVKNFQLMS----AATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRAFQAFAISLSTFDT.............. 424
2 -4.600[H] COG4059 Tetrahydromethanopterin S-methyltransferase, subunit E  ali follow..  16  6......................................................................................................................................EIGLAAAMGALATIAG--AFEDAESDVGSQSNP-NSQVQLAPQMMNFHRYFNKAISGEPVSYMLYGAIAGTVTWV-AAAAVGVGVNALIHMV--FATTAHLGRMASAAEFGHPIYLDVVLSHLGPIAGFGGIATFAIVSLAYIQWALLKHPFPLPLLAALWGVTVGAIGSSTGDVH---YGAERLYQHYPFGGGVPVAAHGNITRKAETGIRNSMDSVYFCAKFGNPLTGLCFGLV..................................................................... 242
3 -4.510[S] COG3037 Uncharacterized protein conserved in bacteria  ali follow..  12  33................................................................................................................................GYALDKKTPIKIITGMISAMVGLMMVLFGGFQFSATFKPVAEAVSKAYGVHGYLMDSYAMKAATQIALGDNFGYVGYVFVLAFFTNL---LLVLFGRYTGAKGIFLTGNTGVSHSQAVLWLIVFWLGFGWVQSIVIAGVLTGVFWAFSTTLIVKPIAKVAGFTIAHNQMLGLWFFSKFAHKFGDPEKHDAENLKLPGWLAIFNHNVTAIAQFSMYMVILLQGVRMMVGEINGSFKGWQDRFINAIPAVDVAALLPFSPNAATLGFVFCTFGT....................................... 342
4 -4.430[F] KOG3099 Bisphosphate 3`-nucleotidase BPNT1/Inositol polyphosphate 1-phosphatase  ali follow..  11  8................................................LMRLVASAYSIAQKAGMIVRRVIAEGDLGIVEKTCATDLQTKADRLAQMSICSSLAR------------KFPK------------------------LTIIGEEDLPSEEVDQELIEDSQWEEILKQPCPSQYSAIKEEDLVVWVDLDGTKEYTEGLLD---VTVLIG--IAYEGKAIAGVINQPYYNYEAGPDAVLGRTIWGVLGLGAFGFQLKEVPAGKHIITTTRSHSNKLVTDCVAAMNPDAVLRVGGAGNKIIQLIEGKA-GCKKWD--TCAPEVILHAVGGKLTDIHGNVLQ............................................................................................. 271
5 -4.380[S] COG3779 Uncharacterized protein conserved in bacteria  ali follow..  12  11...............................................................................................................................................................................................................................................EQADEPVNRADERARKTFKYFWRELFWERRRIISALDFAMVKVPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVFVCNGIPYGGFTIQAMRGQMTEEE...................................................................................... 135
6 -4.260[S] COG5374 Uncharacterized conserved protein  ali follow..  17  53...........................................................................................................................................CVLGFILLLFIDCINRVYSIDKELQLSSASQN-------NGAIIAQDRIEVLSRKFFAQRNMLTGITLFLTFVVV---------RTFGLVIELLTMKDIYRASPPVASSDVKKNDSVTAEAAAQSGASKDDHGDEKNFELLKKIQDIDDEIARLKEKS.............................................................................................................................................. 195
7 -4.190[S] COG5613 Uncharacterized conserved protein  ali follow..  16  131.................................................................................................................................................................RLHEQNMKKIEENQEKIKET--EENAKQVKKSGIASK-GWLSAIASVIVGAIMVASGVGAVA---GAMMVASGVIGMANMAVKQAAEDGLISQEAMKEVALTVVSTVMTFGGSALKCLANIGAKLGANTASLVAKGAEFSAKVAQIST--------------TVGSAVTKLGGSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNN--ADLALNKADIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLA............ 395
8 -4.020[C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits  ali follow..  7  5...................................PVAQRLQKRLPVPYTEWLPELIRRNVGKWVDRKFHGYGIIEPISSTGDRVFTVKVGTPPNFRMSTETLRKFIDIADGNLEILTDSLDKALKIKEEVEKMGFPVGGWGRSMWGINSCTAFLT--------TTAVVDSPSITKALGDALAPYFKEESLPAKLRIF---VSGCPAMCAGGTAIDIAIVGQWGAPPKIREEVIGMCLPPPALAKVTESQIFLVQVCPTGAHTLRREGDKVKLVLLGEKCINCARCKENCDAFDYDPENVGVAILVGGKMSNTGGGARLARVLIPWLPAKPPRYEEIIAVVKHVIEVWRQHAKPGERLADFIDRV-----GWSKFLELVGLKEVHDYYQRVPEFARTFLTFRGRGDVYKRL............................ 378
9 -3.960[P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation  ali follow..  13  25...................................SLRSGQYDDLDGAAERILLDDEEDEGPLPDPVRDGTASRRQRSPKEDGESKLYSGVSNAKH....................................................................................................................................................................................................................................................................................................................................................... 85
10 -3.840[S] KOG4455 Uncharacterized conserved protein  ali follow..  13  8..........................................................................................................................................................................................................................................................................................................................................QSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLS.................................................................. 50
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.