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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSELast
1 -76.000[E] COG0757 3-dehydroquinate dehydratase II  ali follow..  39  12TKTVFVLNGPNLNLLGKREPGIYGVATLDDIEASCKREAGQLELQIDFRQSNHEGDLVSWIQEAGEKNAYVLINPAAYSHTSVAIHDAIRSAR---VTVVEVHLSNIHAREAFRHHSHVSAVTKGVICGFGAEGYLLGLRALAAIAKE 156
2 -7.570[IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase  ali follow..  16  1MKRARIIYNPTS-----------GREIFKKHLAQVLQKFEQAGYETSTHATTCAGDATHAAKEAALREFDLIIAAGGDGTINEVVNGLAPLDNRPTLGVIPVGTTNDFARALGIPREDILKAADTVING................... 118
3 -7.500[S] COG4378 Uncharacterized protein conserved in bacteria  ali follow..  1MSSIMIVGA--------------------DHLGTIPKKLNEIGFSEIMHVTGRKVK--AVKKEIPSHVDLILVLTDYINHN--LTSVLKKRASEQDIPICYAKRSWCSIYKVIGQ................................. 91
4 -6.810[F] COG1435 Thymidine kinase  ali follow..  15  1MAQLYFKYGTSIEILKVAHNYEEQGKPVLLMTSSLDTRASRIGMKAEAVAIDEEMSVFDYVNSLPAKPFCVLIDEAQFLNKKH-VYDFARVVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIE..................... 137
5 -6.790[Q] KOG1204 Predicted dehydrogenase  ali follow..  16  1MGKVILITGASRG-IGLQLVKTVIEEDDECIVYGVARTEAGLQRVLDITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDIKQWERLFDVNFFSIVSLVALCLPLLKSSPFVGNIVFVGWSAYGCSKAALNHFAM. 169
6 -6.630[I] KOG1478 3-keto sterol reductase  ali follow..  12  1MRKVVLITGASSGILACRNMS--AEAVCAALLASHPTAEVTI-VQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHM------STAEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCH 159
7 -6.410[M] KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase  ali follow..  208...VLILSGDHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDDLKAMQVDTSILGLPPKEAAESPYIASMGVYVFRKEVSSYPTSNDFGSEIIPLAVGEHNVQAFLFNDYWEDIGTIGSFFD. 357
8 -6.260[Q] KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases  ali follow..  10  7.SPVVLITGCSQGGIGEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEVIDKFGKID-VLVNNAGVQCVGPLAETPISAMEN----TFNTNV--------FGNKDLIFSFNYYIYWSFNSSGSMRMTQAVVPHMVS 148
9 -6.250[S] COG3016 Uncharacterized iron-regulated protein  ali follow..  13  67......IENADVILVGEWHTHAGIHRFQTDLLKQMTENGHPMVLSMEQFTRDAQ-PLMDDYLTGKIGEQYLIQKANAWPNYESDYRPLVEFAKSQQLPVIAANAPKPIVRCIGRV................................. 174
10 -6.140[G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase  ali follow..  136................................RQSCDWAEEAQVMLSIEIINSIEKYLAVEKEIDSPYLFVYPDAGNVSAWHNDLWSEFYNGHK--------SIAALHLKDTYAVTETSKGQFRDVPFGQGCVDWQELFAVLKKT... 245

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.