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current user: public |
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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSE | Last |
1 | -76.000 | [E] COG0757 3-dehydroquinate dehydratase II | ali follow.. | 39 | 12 | TKTVFVLNGPNLNLLGKREPGIYGVATLDDIEASCKREAGQLELQIDFRQSNHEGDLVSWIQEAGEKNAYVLINPAAYSHTSVAIHDAIRSAR---VTVVEVHLSNIHAREAFRHHSHVSAVTKGVICGFGAEGYLLGLRALAAIAKE | 156 |
2 | -7.570 | [IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase | ali follow.. | 16 | 1 | MKRARIIYNPTS-----------GREIFKKHLAQVLQKFEQAGYETSTHATTCAGDATHAAKEAALREFDLIIAAGGDGTINEVVNGLAPLDNRPTLGVIPVGTTNDFARALGIPREDILKAADTVING................... | 118 |
3 | -7.500 | [S] COG4378 Uncharacterized protein conserved in bacteria | ali follow.. | 8 | 1 | MSSIMIVGA--------------------DHLGTIPKKLNEIGFSEIMHVTGRKVK--AVKKEIPSHVDLILVLTDYINHN--LTSVLKKRASEQDIPICYAKRSWCSIYKVIGQ................................. | 91 |
4 | -6.810 | [F] COG1435 Thymidine kinase | ali follow.. | 15 | 1 | MAQLYFKYGTSIEILKVAHNYEEQGKPVLLMTSSLDTRASRIGMKAEAVAIDEEMSVFDYVNSLPAKPFCVLIDEAQFLNKKH-VYDFARVVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIE..................... | 137 |
5 | -6.790 | [Q] KOG1204 Predicted dehydrogenase | ali follow.. | 16 | 1 | MGKVILITGASRG-IGLQLVKTVIEEDDECIVYGVARTEAGLQRVLDITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDIKQWERLFDVNFFSIVSLVALCLPLLKSSPFVGNIVFVGWSAYGCSKAALNHFAM. | 169 |
6 | -6.630 | [I] KOG1478 3-keto sterol reductase | ali follow.. | 12 | 1 | MRKVVLITGASSGILACRNMS--AEAVCAALLASHPTAEVTI-VQVDVSNLQSVFRASKELKQRFQRLDCIYLNAGIMPNPQLNIKALFFGLFSRKVIHM------STAEGLLTQGDKITADGLQEVFETNVFGHFILIRELEPLLCH | 159 |
7 | -6.410 | [M] KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase | ali follow.. | 8 | 208 | ...VLILSGDHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDDLKAMQVDTSILGLPPKEAAESPYIASMGVYVFRKEVSSYPTSNDFGSEIIPLAVGEHNVQAFLFNDYWEDIGTIGSFFD. | 357 |
8 | -6.260 | [Q] KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases | ali follow.. | 10 | 7 | .SPVVLITGCSQGGIGEKGCRVVATSRSRSTMTDLEQDSRLFVKELDVQSDQNVSKVLSEVIDKFGKID-VLVNNAGVQCVGPLAETPISAMEN----TFNTNV--------FGNKDLIFSFNYYIYWSFNSSGSMRMTQAVVPHMVS | 148 |
9 | -6.250 | [S] COG3016 Uncharacterized iron-regulated protein | ali follow.. | 13 | 67 | ......IENADVILVGEWHTHAGIHRFQTDLLKQMTENGHPMVLSMEQFTRDAQ-PLMDDYLTGKIGEQYLIQKANAWPNYESDYRPLVEFAKSQQLPVIAANAPKPIVRCIGRV................................. | 174 |
10 | -6.140 | [G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase | ali follow.. | 6 | 136 | ................................RQSCDWAEEAQVMLSIEIINSIEKYLAVEKEIDSPYLFVYPDAGNVSAWHNDLWSEFYNGHK--------SIAALHLKDTYAVTETSKGQFRDVPFGQGCVDWQELFAVLKKT... | 245 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |