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Query: IDP92795 gene: csy2; Csy2 [Vibrio phage ICP1_2011_A] AGG09392 [Vibrio phage ICP1_2011_A], from CSGID

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRKFIIVKNVKVDGINAKSSDITVGMPPATTFCGLGETMSIKTGIVVKAVSYGSVKFEVRGSRFNTSVTKFAWQDRGNGGKANNNSPIQPKPLADGVFTLCFEVEWEDCAEVLVDKVTNFINTARIAGGTIASFNKPFVKVAKDAEELASVKNAMMPCYVVVDCGVEVNIFEDAVNRKLQPMVNGYKKLEKIVDNKHMRDKFTPAYLATPTYTMIGYKMVSNVDNFDQALWQYGENTKVKTIGGIYNDLast
1 -5.770[OT] KOG2561 Adaptor protein NUB1, contains UBA domain  ali follow..  10  1MSQ-KLRARLRERDIKLWEEPYYFEEVGSIES-RLARDISGELGISVSDCRIALGELQDGALRKLAARREFNDTGLATFNVRCVDSKGGTVQMLEIKCSLGGLGSDLQAEVAKKLDIVDSSHVKCISGGRIINGQKTLGGTNEGQELHERIQRIRADLELVADADRFMEMEDQDGRPIFLPREENRSLLMAMSMYEVARVAMHKENFDEALLILLEADELFSQCDSKDIVWCY............... 268
2 -5.560[P] COG0168 Trk-type K+ transport systems, membrane components  ali follow..  10  85....FMLDGISPLNSEAMSAFTTTGSTILTDIESHPKGI-RSMMQWLGGMGIIVLFIAVLPKFGVAGRQLFRAEAPGPTEDKLK-PRIRETAKVYFVISFAEVVALLLAGLSLYDAITHTFTT--MACGGFSPYGTSIEAFRSPLVEYIITFFMFVSGYRAIYVDKDFLLKDDEFRFYTALTLAATGLLT--LLLYRDINTGFFDSFRLAIFQVVSIMTTTGFATADFNFW................. 320
3 -5.310[R] COG4798 Predicted methyltransferase  ali follow..  10  103LAMAELKPGDTVVDYIMGGGYFTRIISGAVGPQGVVYAYQPAEFI-----------RFAARYGESLKAVTAALANSKPLDGPITALDLPDNVDAVITVQNYHDMHLKPFPTDTAAKANAEIFKSLKPGGVFL-----------DHSAIAGSGITAADTLHRIDIAAVKQEVEA----------AGFKLEAESGLLADPADARTINVFDPAIRG................................... 285
4 -5.220[S] COG2343 Uncharacterized protein conserved in bacteria  ali follow..  10  1.....................MSVDYPQMAATRGRIEPAPRRVRGYLGHVLVFSAARYVWEVPYYPQYYIPLADVRMEFLRDENHPQRVQLGPSR-----LHSLVSAGQTHRSAARVFDVDGDSPVAGTVRFNWDPLRWFEEDEPLRSHRHVRVELDGIVLADTRSPVLLFETGIPTYIDPADIAFEHLEPTSTQTLC-----------PYKGTTSGYWSVRVAVHRDLAWTYHYPLPAV........ 223
5 -4.720[J] KOG0846 Mitochondrial/chloroplast ribosomal protein L15/L10  ali follow..  10  1.....MLNDLNNSANYQSKKRVGRGPAS-PGFEGGQTPITKLFLKKPLRLGLGRVQEWIDRGRLDASKTITMKDLLDSRCCRGIKHGVELTADEPGLLKTAISIEVSKATVQAIQQIKN-------AGGSITTV----------YFSPLALRAHLHPSSFRTPPRPPLPVSKKDIRYYTNPHFAGY--LANVKNIR.................................................... 202
6 -4.650[P] COG3131 Periplasmic glucans biosynthesis protein  ali follow..  163.................VFKAPELARRDVVSFLGASYDDTYQYGLSARGLAI---DTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHCEKSQVIMDVENHLYARKDIKQLGIAPMTSMRRVCDTIHPQIHDSDRLAMWRGNGEWI---RPLNNPQKLQFNAYMDDNPKGFGLLQLDRDFSHYQDNKRPSLWVEPRVSLMEIPTTGETLDNVVCFWQ................ 395
7 -4.630[S] KOG4090 Uncharacterized conserved protein  ali follow..  10  48..............AAPRQPGLMAQMATTAAGVAVGSAVGHTLGHAITG-------------GFSGGSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGFNEVLKQCRLANG....................................................................................................................... 149
8 -4.620[R] KOG2899 Predicted methyltransferase  ali follow..  107.....LFRNKQLLDIGCNSGHLSI---QIARKFEVKSLVGLDIDRGLINDAQKTVSHLKRHATPGQGIPHIQFVHGNYVLEDDVLLEIERP-----QFDVILCLSCDSGLKQAFRRMYLQLRP----GGKLILEPQSFDGYKRRKKLSVSFIRRTID--QIRDNYNAIKFRPDHFTEYLLSPEVGFAEMKLMGIPEHCKVG-----FKRPIQIFTK................................ 322
9 -4.590[L] COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)  ali follow..  22  1MIGYLV---FQARIAGLSKTSPSFYYPPPTTFLGVAEAIAKDKGI........................................................................................................................................................................................................... 50
10 -4.530[GE] KOG2619 Fucosyltransferase  ali follow..  91.HDWAVF------HEESPKNNYKLFHKPVITLFNYTATFSRHSHLPLTTQYLESIEVLKSLRYLVPLQSKNKLRKRLA-----------------PLVYVQSDCDPPSDRDSYVRELMTYIEVDSY--GECLRNKDLPQQLKNPASMDADGFYRIIAQYKFI-DDYITEKFWRPLKLGVVPVYYGTDWLPSNKSAILVSEFSHPRELASYIRRLDS-----DDRLYEAYVWKLKGE............ 307

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.