Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public

If you have questions about the server, please let us know.

Query: IDP91310 putative translocator protein PopB [Vibrio parahaemolyticus RIMD 2210633] VP1657 [Vibrio parahaemolyticus RIMD 2210633], from CSGID

Results of PSI-BLAST search in nr85s
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .
# E-value Template Links and tools%idFirst MSSIALDRTQTQVYIPESGQTTLENVQKTASTATPSVTVENVKSRDADTLNTGRVKVQLDAPNAAVSDKVTDLTLKAMAQLQKIVDTIAKALHAVADQTGSIAVKIIAGSADDFEVELAAITDKLKSAQNELKIQEVKVAKAKHEQEMAENQEKIKESEAAAKEAQKSGLAAKIFGWISAVVSIVVGAIMVATGVGAAAGALMIAGGVMGAVSMALQEPAVQDALKEAGVNVDVLNKVVMALEIAVAVIGAIVTFGGAAAGGIAKLAAKSASKIAQKVTDIATKAAANMAKVADMGSKAATTTAKAIRYGAETVDLTVNIGKGATDSVHAANNANVTEIQADITDLRAKMTLSQAVIDKLKEEIGKLMEDFQELMSIIMQMIQAKSETMQTVLSRPATVLast
1 6.000e-53UniRef50_A0A2C8EZE6 Protein YopB n=12 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A2C8EZE6_9PSED  ali  33  1MIASAIDRN---GLTPGAASTAEPDGPKRAER-EHDVTVSRVQAQAWSAAPSQ--GVQLPAPAPGVAHSLQPQTLANIKQLVSTVIHDSSRLTQQLLVAVPRLAAARLSSPQAFEIELSRITSELGSAQKANKLEDIKRAREQNLQKMDDNQKKIQESQDAAKEAQKSGLAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSVQAAAAAGWISKET--MEKLGPVLMGIEXXXXXXXXXXXXXXXXXXXXAKLGAKMGTKVAELTATIASKVTEFGSKFGTV---ASLSMSHGAKLGVQVADVTLDVANGASQAVNNSYQAHAALRQADVLENRAELSAFQAVIDILREELTRMVEAFTQVMEQIFQMINAKGDLLHNLSSRPAAI 388
2 4.000e-49UniRef50_UPI00051C619D hypothetical protein n=1 Tax=Aeromonas finlandiensis TaxID=1543375 RepID=UPI00051C619D  ali  36  1MNPISNERSNLAGV----NNIAPSIEAPTADIKTSVATAVAPGNTPAGRGALQSKSVELPSPLPAVNQNVTAEQTNEIAGLVE--ELWPVALKTVQFQAFNMLI-LSFTSPDEFEIELGKVTDKLGEAQKKLKLAEVEQTRQKNIQQMDANQTKMKESAEAAEKAKKSGLFGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQ-AAQDGLISAE-TMKWLGPVMTALEVAMAVVSAVVTCGGAAAGKLAELGAKVGGKVAEVTGKIAAKAGVEAFKAGEVTKATLTATQKVVKTATGATDLVLNIGQGTASTVDSVFKANLQNKQADVVENRQDLTTLQAVMDKLKEALSQMTESFQHIMEMIFQMITAKGTMLQNIASRPSAI 395
3 2.000e-48UniRef50_Q70WN5 AopB protein n=21 Tax=Aeromonas TaxID=642 RepID=Q70WN5_AERSA  ali  30  18........................DVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSNSQVSAQQLGEIGKL---VTSVNENTRLILPHTTGLVTA-AFTSPEAFEIELGKLTSDLEKTQTKLKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIFSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMAVQQ-AAADGLISKEV-MEKLGPALMGIEIAFAVMSAIASFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAQTAKIAQVVTQATDIIIDVSSGAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKEAIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI 397
4 3.000e-45UniRef50_E3BLV8 Uncharacterized protein n=1 Tax=Vibrio caribbeanicus ATCC BAA-2122 TaxID=796620 RepID=E3BLV8_9VIBR  ali  41  1MNSIALDRNQSQVFTPDSNQTTSDKVTGVASSATPAVTFENVKSKSTDVPKVGKSGIQLDPPNAAVNDTINEFTITGMQAMQRLYSTVLKSVDSIIGGSPNIRTKV--SDAADFELELAKITDQLKGAQSSIQKQDLSITKERHKKEMDANAEKLIESEAAAKEAQKAGLASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATTRILD---------HAGVDNPIAQKXXXXXXXXXXXXXXXXXXXXXGAAKLAEVTAKAPQTILKTVNSLSTKVGNGLTKVAEINIKAASTSAKAVKISSETTDVLANVGQGVSNLVSGIKRANVTGIEADLKNSSAAMELINAQMDKIKENISKVFESNQHIMDALMRIIQERYDVLNSVAQNNKSI 391
5 5.000e-44UniRef50_Q5XL02 AopB n=40 Tax=Gammaproteobacteria TaxID=1236 RepID=Q5XL02_AERHY  ali  34  18........................EVTGQSPVAQPRSETRLDAATAPASGQVRKPGVSLNAPLAVSNGQPASQQLTDVSRLL----TQVKQNASLLLPHTNALVSAAFTSPEAFEIELGKLTSDLGKTQNRLKLADLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQ-AAEDGLISKEV-MEKLGPVLMAVEIILAVASAVVTFGAGAVKGLAKLGVKMGFKMAGKASEMGLKLIQNSAKVAKVAGNAASTTAKMAKIGTQTADIIVDVGNGVTKTVDSANQAKLLLKQADLLENRQEMTALQGVIDKLKEAIAQMIEAFQQTMEMIFQMLNAKGDMMNNLARRPAAI 395
6 9.000e-44UniRef50_Q9I324 Translocator protein PopB n=133 Tax=Gammaproteobacteria TaxID=1236 RepID=Q9I324_PSEAE  ali  30  1MNPITLERAGLPYGVADAGDIPALG----RPVARDVESLRVERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQAVGEDVGLARQVVLAGASTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKXXXXXXXXXXXXXXXXXXXXXGLAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVSQSVQQ-AAADGLISKEV-MEKLGPALMGIEMAVALLAAVVSFGGSAVGGLARLGAKIGGKAAEMTASLASKVADLGGKFGSL---AGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVXXXXXXXXXXXXXXXXXXXXXIFAMLQAKGETLHNLSSRPAAI 390
7 1.000e-40UniRef50_A0A1N6NI33 Type III secretion system translocon protein, YopB/IpaB/SipB family n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1N6NI33_9GAMM  ali  27  1MNPVTIDRSNMIGGVMAPEIDIGSKETRRATPMAAAEAGRNEGNKGK--------GVDLPQPKPGINQKVSVEQLQELKTLQQSVTQGSTAAQRLLGKTTVNLAVVLFSSPEDFEIELGKLTTDLEKTQKKLKLADIERTRQQNVKKXXXXXXXXXXXXXXXXXXXXXGLVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQ-AAEDGLISKEV-MEKLGPVLVGIEIAMAILSSIVTFGGAALAHVAKGAGKIAARAAQLAAKVGM----------DTAQQTLSTTMKAVKLGTQAVDVVLDVSNGVAKTVDSTNQSKLQDKQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQNILEMIFNMVTAKGAMLNNLSSRPAAI 385
8 2.000e-40UniRef50_A0A0F7LGR0 Uncharacterized protein n=13 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0F7LGR0_9GAMM  ali  29  33.........................................SQAGNIQLNVVTTRGVALSAPLAVSNTRLDVQQQGKIASLVASVTQGVTLAAGLTTKLTSRLASLAFSSPEEFEIELGKLTSDIERTQTNLKIQDIQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLFSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVSQGLQQ-AAQDGLISKE-TMKWLGPVMTAIEVTMAVAAAAVSFGGSAVGMIAKMGAKMGKIVAEVASKVGSKAAEFSAKFAGTATNA---MARSVKVGMQVSDMAVDLANGGAQTANSALQAKSANRQADVQLSRSELTAFQAVMDKLKEELSQMVESFQHVMEMVFQMLNAKDDMINNLASRPHEI 410
9 1.000e-39UniRef50_Q06114 Protein YopB n=30 Tax=Bacteria TaxID=2 RepID=YOPB_YERPS  ali  27  10.............STPVTGSLLPYVETPAPAPLQTQQVAGELKDKN---GGVSSQGVQLPAPLAVVASQVTEGQQQEVTKLLESVTRGAAGSQLISNYV-SVLTKFTLASPDTFEIELGKLVSNLEEVRKDIKIADIQRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVIGMANMAVKQ-AAEDGLISQE-AMKILGPILTAIEVALTVVSTVMTFGGSALKCLANIGAKLGAKVAQISTGISNTVGSAVTKLG--GSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADXXXXXXXXXXXXXXXXXXXXXHQQVMELIFQMINAKGDMLHNLAGRPHTV 401
10 5.000e-39UniRef50_F9T791 Translocator protein PopB n=3 Tax=Vibrio TaxID=662 RepID=F9T791_9VIBR  ali  46  1MNSMLIDRSQGTGYTQGPDETKLEKNQQ-KTTGQTNVAAGNVQKNGAELPSSDKVLPQLNVPQVQVTEKSTPLTLAEIATLQQAVSALSGTMRATDQETTAIAVKIISGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEMAENLEKIKESQEAAQEAKKSGLASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVTQMPEVQKAMEAAGVDVKAFGYAMMAIQGALAIASAGVAIG---------------------------NIVNALKGAVDVAAKTLSTAVKVTRTVAETVDTAANLGSSAADIANGVNQSKVANIQADLADIRAEMTLDQSVIDKLKEEIENILQGFQELMEIIMQMIQAKGETMQTVLNRPATV 371
11 3.000e-38UniRef50_A0A263P1L4 Uncharacterized protein n=1 Tax=Pseudomonas sp. IB20 TaxID=1702250 RepID=A0A263P1L4_9PSED  ali  28  1MNPITFDR---VALTTGNVFANDPVVRPRNDRGDALTVTR---VEADGRPAAPSQGVQLTAPLPASQQRLEASTRADINRLVQSVRQDSVLAQRFIAETTRLGVARL-SSXXXXXXXXXXXXXXXXXXXXXLKLEEITRAREQNLQKMDENQKKIKESTEAAKEAQKSGLVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSVQQ-AAKDGLISKEV-MEKLGPALMGIEXXXXXXXXXXXXXXXXXXXXXKLGAKIGGKAAELTASVAAKVTELGAKFGSA---ASQSISHGVKLGVQISDVTLDVANGFAQTANSVLQAKAADKQADXXXXXXXXXXXXXXXXXXXXXLSRMVESFLQIMELIFQMINAKGDSLHNLSSRPAAI 387
12 8.000e-34UniRef50_Q6TLM0 AopB n=11 Tax=Aeromonas TaxID=642 RepID=Q6TLM0_AERHY  ali  31  43...................................................KHGQGVVLPQPMPGIGQQMSPPKQQELDQLRKTAQLGTANAAKLLGSST-LLNKLAFASPEEFEIELSKMTSELEQTQKKLKLADLERIRAENLKKIDENQTKMKEASEAADKAKKSGLASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQAAADGRISPETM------------------------------------------KXXXXXXXXXXXXXXXXXXXXXXXXSAASTAMKAVKFATQAADLVVDIGTGTAKAVDGGLQADAQIKQANLLENRQVMTELQGVMDKLKEVLSQMTESFQQVMEMIFQMITAKGAMLNSLASRPTAI 347
13 5.000e-31UniRef50_UPI000BE73CDF hypothetical protein n=1 Tax=Yersinia pestis TaxID=632 RepID=UPI000BE73CDF  ali  29  1.................................................................................................................FEIELGKLVSNLEEVRKDIKIADIHRLQEQNIKKXXXXXXXXXXXXXXXXXXXXXGIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVIGMANMAVKQ-AAEDGLISQE-AMKILGPILTAIEVALTVVSTVMTFGGSALKCLANIGAKLGAKVAQISTGISNTVGSAVTKLG--GSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADXXXXXXXXXXXXXXXXXXXXXHQQVMELIFQMINAKGDMLHNLAGRPHTV 296
14 1.000e-30UniRef50_A0A2K1CFL4 Uncharacterized protein n=1 Tax=Vibrio agarivorans TaxID=153622 RepID=A0A2K1CFL4_9VIBR  ali  23  22.......................SSESVSNSEGNSSAVIDEFQSKTFSPQPLSNDRVQLNKPNAEMVNKAPEVTSQEMERAQKIANTQDNNVKLFTSHILDSVDSLLSGKSKAFELAFTLLLNKIGNLQRDLTVDKLNATKSTYEDDMVENQKKIKEAEKAALEAKQVGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELVINLPVVKDAFVSGEDAFNGLNTALTVVGVTCAVASVLITGGGSAAKLMTNLGSKLG---VDMLTTAGSKLTNLITSLESVGAKSIAVTSHATNYVASGSSLALDTSKGITDITHYAKQIQMNYMEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMRTMNSNVESLNKLNQN.... 400
15 2.000e-29UniRef50_A0A0F7Y6D3 Uncharacterized protein n=19 Tax=cellular organisms TaxID=131567 RepID=A0A0F7Y6D3_9PSED  ali  20  2.........RTEHLIAEPQAIPPASEMETPLTGAAIRLPGDTGMASMVTPSRPERSVELDPPLIQ-GSLATGRDLEGLLDASIDPGRLMQPVLATVPDVGALILGQLAGEISDAELDLTELLSRLGTRQTELNLQQVRQMTEQNRQQMALNAQKMAEVTQRHQDAGTASVFAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQ-AAEDGHISKEV-MKYLGPALMVVEVALAVASVVLTCGGSLAVVAAKLAGKVSGKAAQVALSLGQKIQSVASSGSSSVASAGTQA--KLQMTLTGASMATATLSGAGEAASSVMQGLALRSEAQLAEMRLVLEQGHGYLEQL....................................... 349
16 4.000e-29UniRef50_U3AD67 Uncharacterized protein n=1 Tax=Vibrio azureus NBRC 104587 TaxID=1219077 RepID=U3AD67_9VIBR  ali  26  6....TLDRAQLLASVNKQELETLKDVTKTTKNGDSLINVNDLELKNVVSQNSTGLFVQLDKPNSELVNQATPEVSKEIGQVQGIAAAQIEVVEAFSDQIIGSLQKNLLGKSVDFELAFALMMNKLENIQSNLTINKIKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELVINIPEVKSSIENGEDAFKAIDTTLTVGAIAFAVSSLLITGGGSAANLMTKLGTKLPGSVGNLLTNAGSKATTLIASAENIGARTATTTGHITRFSAEGADLALDISKGISSTVYTARQAQSAEVQADXXXXXXXXXXXXXXXXXXXXXMTKATEVHRELMITMMQTMQSNFTSLKTLNARPQVI 419
17 1.000e-28UniRef50_A0A2V3FVC8 Uncharacterized protein (Fragment) n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=A0A2V3FVC8_PSEAI  ali  30  1MNPITLERAGLPYGVADAGDIPALG----RPVARDVESLRVERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQAVGEDVGLARQVVLAGASTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKMEHNQQKIRESEEAAKEAQKSGLAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVSQSVQQ-AAADGLISKEV-MEKLGPALMGIEXXXXXXXXXXXXXXXXXXXXARLGAKIGGKAAEMTASLASKVADLGGKFGSL---AGQSLSHSLKLGVQVSDLTL................................................................................. 309
18 3.000e-26UniRef50_D2TXP8 Yop effector LopB n=1 Tax=Arsenophonus nasoniae TaxID=638 RepID=D2TXP8_9GAMM  ali  26  14.................QSLVNSSPITPIAKKSTANIALEKSPALSATKPSLQPNRVLLPEPNANLAAKST----NSDTLLAKLNVLQQEVVPAIDVKSSLKLLSLALTSPASFEVELSKVTSELQTNQQKLKLEDIQRIKQQNALKMDENQTKIQESEDAVKQSQKSGLAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQIVQEAAAAGLISPE--TMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQVGAKIGGKAAEVTAKLPGMLSSGVTA-------TTQSVANNVKTGLEVGNLVADVGETASQLASSITHSIASDKIADAKMLESVMTMSQSIXXXXXXXXXXXXXXXXXXXXXLTQMIHEKGEVLRELAVRPKTI 382
19 3.000e-24UniRef50_S2KFH0 Translocator protein n=1 Tax=Pseudomonas plecoglossicida NB2011 TaxID=1330531 RepID=S2KFH0_9PSED  ali  22  5.......QSDVTVMPADVGLLDVSRVTESPNQADAVVTISATPGQSVDVAPALPLPQALNGSLSAEATKQLEAALGALFERSELIEPIVKDLSQAAGLLVAKETGRL--SPDAADLELQALLATIITDKSKIDRERILQARSENIERIQQNQDKMAESLNAAKEAKKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALQQ-AAQDGLISK-KAMEALGPVMMAVEXXXXXXXXXXXXXXXXXXXXXKVASKVATEVGGTVGELAASLSQKATKAANLATKAFDVAGKSVSTGVKVAKLVADVGGGASKLAASVMDYKLASTEADTAQARAELDAGEALVRRLVEAYAPSNKALEDALDSMLGMLRDNAETQERVFNR.... 397
20 6.000e-24UniRef50_UPI0009DC2863 hypothetical protein n=2 Tax=Burkholderiaceae TaxID=119060 RepID=UPI0009DC2863  ali  23  66........................................DASKQVTEILSKQPERLTRPTPAQSMVTS-----LQANQALNRIMARADGTLE---KGARLALSNIETVSMDSMMLATMLLTGKVMGDTAESKCKALEIMSGKQEQQIKEYCEQLDKAVEQQQQAKKSGIIGVVFDWVVAAVEIGIGVVKLA--CGNPTGVLDIAAGISGAFTLALIDPAHASLY---GKIADVAGKIQLVLE----VVSMAVDMLSAAVRGLAKVA----THCVRQAGTFVEKAGALLKSVGSLIKRAAVGLAKKTWAALQIGNTILNMGKYLRKAGAYIKRKAMEFMQ........................................................... 354
21 1.000e-23UniRef50_K5U5S2 Protein yopB n=169 Tax=Vibrionaceae TaxID=641 RepID=K5U5S2_VIBHA  ali  86  1.................................................MNTGKVKVQLDAPNAAVSDKVNELTLKAMAQLQKIVDSIAKVLHAVADNTGSLAVRIIAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPAVQDAMKEAGINVDALNKXXXXXXXXXXXXXXXXXXXXXXXXXXXKLAAKSAGKIAQKVTDIATKAAANMAKIADMGSKAATTTAKAIRFGAETVDLAVNVGKGTTDAVHASNNAKVTNIQSDITDLRAKMTLSQAVXXXXXXXXXXXXXXXXXXXXXIMQMIQAKGETMQAVMSRPATV 350
22 1.000e-23UniRef50_A0A1S6HYL3 Uncharacterized protein n=1 Tax=Shewanella psychrophila TaxID=225848 RepID=A0A1S6HYL3_9GAMM  ali  46  175..................................................................................................................................................QMKDNQTKIKESEEAAQEAKKSGLFGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVLQEPAVQSALKDAGINVEAFQKVMMALEIISAVVSTVASFGGAAVGKAAQLAGKVSTKIASGLTKVADKL-DDLAKLGTAINKFGTAATK-VRTISTITETGANVAQGTASTVNTAFQANAVGKQAETEDSRAEVLAMRAVXXXXXXXXXXXXXXXXXXXXXIMQMINANGDSMKEILSRPAAV 425
23 5.000e-20UniRef50_UPI0006834ED6 hypothetical protein n=1 Tax=Yersinia enterocolitica TaxID=630 RepID=UPI0006834ED6  ali  25  2.................................................................VASQVTEGQQQEITKLLESVTRGTAGSQLISNYV-SVLTNFTLASPDTFEIELGKLVSNLEEVRKDIKIADIQRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMANMAVKQ-AAEDGLISQE-AMQVLGPILTAIEVALTVVSTVMTFGGSALKCLADIGAKLGAKVAQISTGISNTVGSAVTKLG--GSFGSLTMSHVIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNA.......................................................... 286
24 1.000e-14UniRef50_A0A2X3I3G0 Translocator protein PopB n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=A0A2X3I3G0_PSEAI  ali  29  28.........................................................................................................................................................................................................................QQAAADGLISKEV-MEKLGPALMGIEXXXXXXXXXXXXXXXXXXXXARLGAKIGGKAAEMTASLASKVADLGGKFGSL---AGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADVQESRADLTTLQGV........................................... 162
25 2.000e-12UniRef50_A0A2V3FYT0 Uncharacterized protein (Fragment) n=10 Tax=Pseudomonas aeruginosa TaxID=287 RepID=A0A2V3FYT0_PSEAI  ali  34  1....................................................................................................................................................................................................................................................................................................GKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVXXXXXXXXXXXXXXXXXXXXXIFAMLQAKGETLHNLSSRPAAI 107
26 1.000e-03UniRef50_U3AWF2 Uncharacterized protein n=1 Tax=Vibrio azureus NBRC 104587 TaxID=1219077 RepID=U3AWF2_9VIBR  ali  29  144..................................................................................................................................................................................................................MVAAVVIPKIADEVMKAAGVPEDIRNKVKMGLEIGIGIVGMLLSFSPAQMNNIAKTAATTLSKVVPKVVTNA--VTKFASQGASFAGKTASGAVKAA-------------GRALQEVMENA-NAILKLLKAFCPKLSQLISKAQAGLNKAQKILDDLLENIQDFM........................ 293

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.