current user: public
If you have questions about the server, please let us know.

Query: gi|16127999|ref|NP_414546.1|(removed signal:1-23) predicted protein (yaaX b0005 exp) [Escherichia coli str. K-12 substr. MG1655], from E.coli

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst AEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHRLast
1 -8.080sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2  ali   55  1....LQP-----IG-RDKDGLYWD................................................... 18
2 -7.850sp|Q14517|FAT1_HUMAN(removed signalp:1-21) Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=1  ali   30  1.........SFQSESCDDNGYHWDTSDWMPSV........................................... 23
3 -7.760sp|Q8TDW7|FAT3_HUMAN(removed signalp:1-32) Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2  ali   44  1...................AYHWDTSDW............................................... 9
4 -7.650sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1  ali follow..  13  14VEVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNK.............. 74
5 -7.520sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3  ali follow..  20  420.....LQAVLTHQGRSSSSGHYVSWVKRKQDEWIK........................................ 449
6 -7.400sp|O75907|DGAT1_HUMAN Diacylglycerol O-acyltransferase 1 OS=Homo sapiens GN=DGAT1 PE=2 SV=2  ali follow..  20  346..LNAVAEL-MQFGDREFYRDWWNSESVTYQNWWCIRHFYK.................................. 391
7 -7.370sp|P35610|SOAT1_HUMAN Sterol O-acyltransferase 1 OS=Homo sapiens GN=SOAT1 PE=1 SV=3  ali follow..  20  389..LNAFAEM-LRFGDRMFYKDWWNSTSYSNRTWWLYYYAYK.................................. 434
8 -7.330sp|O75908|SOAT2_HUMAN Sterol O-acyltransferase 2 OS=Homo sapiens GN=SOAT2 PE=2 SV=1  ali follow..  20  363..LNAFAEM-LRFGDRMFYRDWWNSTSFSNRTWWLYSYVYQ.................................. 408
9 -7.180sp|Q8IVW1|ARL17_HUMAN ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17A PE=1 SV=2  ali follow..  21  43..VPAVPTVGFCVETVEYKNAVWDGSHFKIRPLWQHFFQ.................................... 83
10 -6.870sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens GN=USP9X PE=1 SV=3  ali   26  65.....LVGVLVHSGQASG-GHYYNGGDGERNRWYK........................................ 99
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 4 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24