current user: public
If you have questions about the server, please let us know.

Query: gi|16128013|ref|NP_414560.1| sodium-proton antiporter (nhaA b0019 exp) [Escherichia coli str. K-12 substr. MG1655], from E.coli

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .
# Score Template Links and tools%idFirst MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSVLast
1 -11.300sp|Q86UD5|NHDC2_HUMAN Mitochondrial sodium/hydrogen exchanger NHA2 OS=Homo sapiens GN=NHEDC2 PE=1 SV=2  ali follow..  13  146.................LLGMLLAGFLIRNIPVIN----------------NVQIKHKWSSSLRSIALSIILVRAGLGLDKALKKLKGVCVRLSMGPCIVEA--CTSALLAHYLLGLPWQWGFILGFVLGAVSPAVVVPSMLLLQGGVEKGVPTLLMAAGSFDDILAITGFNTCLGIAFSTGSTVFNVLRGVLEVVIDKLVCKRTFLVLGLSVLAVFSSVHFGFPGSLCTLVMAFLAGMGWTSEKAEVEKIIAVA----WDIFQPLL-FGLIGAEVSIASLRPETVGLCVATVGIAVLIRILTTFLMVCFAIFISFAWLPKAT-------QAAIGSVALDTARSHGEKQLEDYGMDVLTVAFLSILITAPIGSLLIGLLGPRLLQKV. 520
2 -11.200sp|Q4ZJI4|NHDC1_HUMAN Sodium/hydrogen exchanger-like domain-containing protein 1 OS=Homo sapiens GN=NHEDC1 PE=2 SV=2  ali follow..  11  126.................LLGMLLAGFTIRNVPFIN------------------HVPNTWSSILRSIALTIILIRAGLGLDPQ----ALRHLKVVCFRLACLMEASAAAVFSHFIMKFPWQWAFLLGFVLGAVSPAVVVPYMMVLQENVEEGIPTLLMAASSMDDILAITGFNTCLS-SLLAGIVLGFFVRYFPSEDQKKLTLKRGFLVLTMCVSAVLGSQRIGLHGSLCTLVLSFIAGTKWSQEKMKVQKIITTV----WDIFQPLL-FGLVGAEVSVSSLESNIVGISVATLSLALCVRILTTYLLMCFA----------GFSFKEKIFIALAWMPKATVQAVLGPLALETARVSAPHLEPYAAFLAILITAPNGALLMGILGPK.. 494
3 -7.830sp|Q3KNW5|SOAT_HUMAN Solute carrier family 10 member 6 OS=Homo sapiens GN=SLC10A6 PE=1 SV=2  ali follow..  13  41..................................................................MMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQF--GLMPFT--------------AYLLAISFSLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSISMTTCST---------VAALGMMPLCIYLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGVYVNYRWP-----------KQSKIILKIGAVVGGVLLLVVAVAGVVLAKGSWNSDITLLTISFIFPLIGHVTGFLLALFT-----------HQSWQRCRTISLETGANIQMCITMLQLSFTAEH---LVQMLSFPLAYGLFQLIDGFLIV........ 305
4 -7.750sp|Q14940|SL9A5_HUMAN(removed signalp:1-16) Sodium/hydrogen exchanger 5 OS=Homo sapiens GN=SLC9A5 PE=1 SV=2  ali   13  13..............................................................................................................................SLISAVDPVAVLAVFEEVH--VNETLFIIVFGESLLNDAVTVVLYKVCNSFVEMAVGLVFAFLLALTTRFTKRVRIIEPLLVFLLAYAAYLTAEMASLSAILAVTMCGLGCKKYVEANISHKSRTTVKYTMKTLASCAETVIFMLLGISAVDSSKWAWDSGLVLGTLIFILFFRALGVVLQTWVLNQFRLVPLDKIDQVVMSYG-GLRGAVAFALVILLDRTKVPAKDYFVATTIVV-VFFTVIVQGLTIKPLVKWLKVKR. 294
5 -7.640sp|Q92581|SL9A6_HUMAN(removed signalp:1-42) Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC9A6 PE=1 SV=2  ali   15  33..............................................................................................................................AIVSATDPVTVLAIFHELQ--VDVELYALLFGESVLNDAVAIVLLGIFSGSFAMGAATGVVTALVTKFTKLREFQLLETGLFFLMSWSTFLLAEAWGFTGVVAVLFCGITQAHYTYNNLSTESQHRTKQLFELLNFLAENFIFSYMGLTLFTFQNHVFNPTFVVGAFVAIFLGRAANIYPLSLLLNLGRRSKIGSNFQHMMMFA-GLRGAMAFALAIRDTA----TYARQMMFSTTLLIVFFTVW................. 299
6 -7.620sp|P48764|SL9A3_HUMAN(removed signalp:1-25) Sodium/hydrogen exchanger 3 OS=Homo sapiens GN=SLC9A3 PE=1 SV=2  ali   12  11..............................................................................................................................SLMAAVDPVAVLAVFEEVH--VNEVLFIIVFGESLLNDAVTVVLYNVFESFVALLVGVVFAFLLSLVTRFTKHVRIIEPGFVFIISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASSAETIIFMFLGISAVNPFIWTWNTAFVLLTLVFISVYRAIGVVLQTWLLNRYRMVQLEPIDQVVLSYG-GLRGAVAFALVVLLDGDKVKEKNLFVSTTIIV-VFFTVIFQGLTIKPLVQWLKVKR. 292
7 -7.610sp|Q9Y2E8|SL9A8_HUMAN Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4  ali follow..  11  90.............SVAVVSLGILMGAVIKIIEFKKLANWK----------EEEMFRPNMFFLL---LLPPIIFESGYSLHKGNFFQNIGS-----ITLFAVFGTAISAFVVGGGIKLNMTDSFAFGSLISAVDPVATIAIFNALH--VDPVLNMLVFGESILNDAVSIVLLKMFFGSAALGTLTGLISALVLKHIDLRKTPSLEFGMMIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEISFVIWCIVL-VLFGRAVNIFPLSYLLNFFRDHKITPKMMFIMWFS-GLRGAIPYALSLHLDLEPMEKRQLIGTTTIVI-LLLGGSTMPLIRLMDIEDAKAHR. 483
8 -7.210sp|Q96EP9|NTCP4_HUMAN Sodium/bile acid cotransporter 4 OS=Homo sapiens GN=SLC10A4 PE=2 SV=2  ali follow..  16  112..................................................................ALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQF--GLLPLL--------------AFLLALAFKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISST--------LLALVLMPLCLWIYSWAWINTPIVQLLPLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWS---------LLVTLVVLFIMTGTMLGPELLASIPAAVYVIAIFMPLAGYASGYGLATLF-----------HLPPNCKRTVCLETGSNVQLCTAILKLAFPPQFIGSMYMFPLLYALFQSAEAGIFVLIYKMYGSEM. 389
9 -7.180sp|Q14973|NTCP_HUMAN Sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A1 PE=2 SV=1  ali follow..  12  34..................................................................MLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQY--GIMPLT--------------AFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCST--------FCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQYMRYVIKGGMII---------ILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALF-----------CLNGRCRRTVSMETGCNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIFWCYEKFK. 311
10 -7.170sp|A8MT54|NHCL2_HUMAN Putative protein NHEDC1-like 2 OS=Homo sapiens PE=5 SV=2  ali follow..  11  28..............................................................LRSIALNIILIRAGLGLDPQALRHLKVVCFRLAI-GPCLMEASAAAVLSHFIMKFSWQWAILLGFVLGAVSPAVVVLYTMVLQENVEEDIPTLLMAASSMDDILALTGFNTCLSIVFSSGGMLNNAIASIGNVCIKKLTLKRGFLVLTTCVSAVLGSQHIGLHGSLCTLVLSFIAGTKWSQEKMKVRKIITNV-----WDIFQPLLFGLVGAEVSVSLLESNIVGISVATLSLALCVRILTTYLLM----------CFAGFSFKEKIFIA-LAWMPKYVQTVLGPLALETARVSTPHLEPYAAFLAISIAAPNGALLMGILGPK.. 365
FFAS is supported by the NIH grant R01-GM087218-01
1 4 4 3 2 6   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.