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Query: gi|238922443|ref|YP_002935956.1| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLAEDRCKKILDILDSMGSVTVQQLMDELDTSESTIRRDLVAMDKKGYLTKVHGGAIVNNTNIHTQDEKVINRLKQNRNEKEQIARYAASLIVDNDFVYIDAGTTTAVMIDYITAKNVVFVTNSLTNAKRISDRGYTVYILGGEFKSTTEAIVGDEAVVTLDKYNFTKGFWGTNGITVKNGFTTPEIKEAMVKKKSMENSKEKYILADDSKFSQVSSIKFADFEDAVIITNALSNDNYKKYKNIKEVLast
1 -11.200sp|P49247|RPIA_HUMAN Ribose-5-phosphate isomerase OS=Homo sapiens GN=RPIA PE=1 SV=3  ali follow..  16  80..............................................................................EAKKLAGRAAVNHVRNNQVLGIGSGSTIVHAVQRIAERNLVCIPTSFQARQLILQYGLTLSDLD-------------------RHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKD................................... 201
2 -8.990sp|Q9H171|ZBP1_HUMAN Z-DNA-binding protein 1 OS=Homo sapiens GN=ZBP1 PE=1 SV=2  ali follow..  15  11..EGHLEQRILQVLTEAGSVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSPATWCLGGTDPEGEGPAELALSSPAERPQQHAATIPETPGPQRFLKDNGPQRALVIAQALGMRTAKDVNRDLYRMKS..................................................................................................................... 149
3 -8.850sp|P62851|RS25_HUMAN 40S ribosomal protein S25 OS=Homo sapiens GN=RPS25 PE=1 SV=1  ali follow..  17  49LFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLV................................................................................................................................................................................................... 100
4 -8.800sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens GN=EIF2B1 PE=1 SV=1  ali follow..  15  28.......RTLLEFLKRDKGETIQGLRANLTSAIETLDSSVAVSSGGELFLRFISLASLEYSDYSKCKKIMIERGELFLRRRNKIADLCHTFIKDGATILTHAYSRVVLEAAVAAKKRFSVYVSGKKMAKALCHLNVPVTVV-------LDAAVGYIMEK------ADLVIVGAEGV-VENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRL................................ 238
5 -8.690sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4  ali   33  135.IYQDQEQRILKFLEELGETTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKE................................................................................................................................................................................................... 188
6 -8.090sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4  ali   18  146..MAEIKEKICDYLFNVSDSSALNLAKNIGLKARDINAVLIDMERQGDVYRQ................................................................................................................................................................................................... 196
7 -7.750sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1 SV=1  ali   13  63......QAVILLYFQDQASWTLEELSKAVKMPVALLRRRMSVWLQQGVLREEPPGTFSVIEEEDESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSAGVYR..................................................................................................... 216
8 -7.350sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens GN=EIF2B2 PE=1 SV=3  ali follow..  16  146..............................................................................GTMENIAAQALEHIHSNEVIMTIGFSRTVELKEAARKRKFHVIVQGHEMAVNLSKAGIETTVM-------TDAAIFAVMSR------VNKVIIGTKTI-LANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLS.................................. 275
9 -7.230sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   13  166....KRRNLIIEAVTNLRLISLFTIQKMIKCCKKSIVRLVRNLSEEGLLR..................................................................................................................................................................................................... 223
10 -7.170sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4  ali   12  14..LLKRRNLIIEAVTNLRLISLFTIQKMIKCCKKSIVRLVRNLSEEGLLR..................................................................................................................................................................................................... 73
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;