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Query: gi|238922449|ref|YP_002935962.1|(removed signalp:1-29) hypothetical protein (EUBREC_0023) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst TGYAFRHDAHENIDIYTLISLAGLVGSFVSLAYMANVAGRKSEDDYTIYYLPIDKVYSDVMLVIFTLLMVFMGKVISGVKNQHFDYASLIMTAGTFTFLFDMAFIILYQSIVRKIKGNILCTHSLMYKGYELLKRVIEKKDIHTQKTKEIMRIQEALEAISEGALDTTLNVNEFHGQQKKVAEAVNHIRQGLMSSVNESLKNEKLKADLITNVSHDIKTPLTSIVNYVDLLKRENLENENAKYYIHVLEEKSQRLKQLTEDLVETSKITSGNVKLNMQKLDLVELLYQTGGEFNERFESRNLTIVTKIPSEQIFIYADGRQLYRSIENLYTNAAKYALENTRVYVELEKADTKAVFTIKNVSKNELDIVSNGNVDLTERFVRGERSRTTEGSGLGLSIAKNLTHLMGGKFEIKVDGDLFIATITYNIILast
1 -22.200sp|Q16654|PDK4_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1  ali follow..  13  64.......................................................................................................................................................RLANILKEIDI-QLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQEIEVIVVLGKEDLTI---KISDRGGGVPLRIIDRLFSYTYSTAPNAPLAGFGYGLPISRLYAKYFQGDLNLYSSGYGTDAIIYLKAL 367
2 -21.600sp|Q15119|PDK2_HUMAN(removed signalp:1-16) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2  ali follow..  11  44.......................................................................................................................................................RLANIMKEINL-RVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSDAYDMAKLLCDKYYMASPDLEIQEINAASKQPIHMVYVPSHLYHMLFELFKNAMRATVESHEIKVMVALGEEDLSI---KMSDRGGGVPLRKIERLFSYMYSTAPTPQPGGFGYGLPISRLYAKYFQGDLQLSMEGFGTDAVIYLKAL 347
3 -21.500sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2  ali follow..  10  70.............................................................................................................................................LTPTMMLYAGRSQDGSHLLKSARYELPVRIAHRIKGFRCLNPTILHVHELYIRAFQKLTDFPPIKDQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKAPRVRIN-GHVAARFPFIPMPLDYILPELLKNAMRATMESPDVVITIANNDVDLII---RISDRGGGIAHKDLDRVMDYHFTTAEASTQDGFGFGLPTSRAYAEYLGGSLQLSLQGIGTDVYLRLRHI 403
4 -20.600sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1  ali follow..  10  48............................................................................................................................................FLRKELPVRLANTMREVNLLPD-NLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSDAYETAKMLCEQYYLVAPELEVEEFNAKPDKPIQVVYVPSHLFHMLFELFKNSMRATVELPAVKTLVTLGKEDLSI---KISDLGGGVPLRKIDRLFNYMYSPTRAAPLAGFGYGLPISRLYARYFQGDLKLSMEGVGTDAVIYLKAL 361
5 -18.100sp|Q15118|PDK1_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1  ali follow..  11  78............................................................................................................................................FLRQELPVRLANIMKEISLLPDN-LLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGSHRKHIGSINPNCNVLEVIKDGYENARRLCDELELEELNAKPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHPIQVHVTLGNEDLTV---KMSDRGGGVPLRKIDRLFNYMYSTSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSEGYGTDAVIYIKAL 392
6 -8.050sp|A0AV96|RBM47_HUMAN RNA-binding protein 47 OS=Homo sapiens GN=RBM47 PE=1 SV=2  ali follow..  3..............................................................................................................................................AEDSTAAMSSDSAAGSSAKVPGAPNEAALLALMERTGYSMVQENGQRKYGGPPPGWEGPHPQRGCEVVGKIPRDVEDELVPVFEAVGRIYELRLMMDKNRGYAFVMYCHKHEAKRAVREL-DNCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQVDWAEPEIDVDEDVMETVKILYVRNLMI---ETTEDTIKKSFGQFNPGCVERVKKIRDYAFDAVHAMNNLNG----TELEGSCLEVTLAKPV. 319
7 -7.650sp|P40222|TXLNA_HUMAN Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3  ali follow..  12  187...................................................................................................................................................EKLAALCKKYAELLEEHRNSQKQMKLLQKKQSQLVQEKDHLRGEHSKAVLARSKLESLCREL-QRHNRSLKE---------EGVQRAREEEEKRKEV-------TSHFQVTLNDI-QMEQHNERNSKLRQENMELAERLKKLIEQYELRFKHKDLQQQLKLQQAQEMLKEAEERHQREKDFLLKEAVESQRMCELMKQQETHLKQQLALYTEKFEEFQNTLSKSS--EVFTTF-KQEMEK----------MTKKIKKLEKETTMYRSRWESSNKAL..... 443
8 -7.650sp|O60239|3BP5_HUMAN SH3 domain-binding protein 5 OS=Homo sapiens GN=SH3BP5 PE=1 SV=2  ali follow..  10  37................................................................................................................................................................EEEEVDPRIQGE---EKLNQSTDDINRRETELEDARQKFRSVLVEATVKLDELVKKIGKAVEDSKPYWEARRVARQAQLEAQK-ATQDFQRATEVLRAAKETISLAEQRLLEDDKRQFDSAWQEMLNHATQRVMEAEQTKTRSELVHKETAARYNAAMGRQLEKKLKRAINKSKPYFELKAKYYVQLEQLKKTVDDLQAKLTLAKGEYKMKNLEMISDEIHRRSSAMGPRGCGVG................................. 274
9 -7.640sp|Q4VCS5|AMOT_HUMAN Angiomotin OS=Homo sapiens GN=AMOT PE=1 SV=1  ali   17  131..........................................................................................................................................................................VSRAQQMVEILSDENRNLRQELEGCYEKVARLQKVETE-IQRVSE----------AYENLVKSSSKREALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYE-DTRKTISQLFAKNKESQREKE-KLEAELATARSTNE-DQRRHIEIRDQALSNALEEELKKKQVYV................................................................................... 300
10 -7.340sp|Q9NQ94|A1CF_HUMAN APOBEC1 complementation factor OS=Homo sapiens GN=A1CF PE=1 SV=1  ali follow..  10  6................................................................................................................................................................KSGGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIIGKLPRDLEDELIPLCEKIGKIYEMRMMMDNNRGYAFVTFSNKVEAKNAIKQL-DNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQ--LWGHGIAVD-DTMSSVKILYVRNLML---STSEEMIEKEFNNIKPGAVERVKKIRDYAFV-AVEAMKALNGK---VLDGSPIEVTLAKPV. 304

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.