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Query: gi|238922439|ref|YP_002935952.1| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EUBREC_0007) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIREINVSEITAAIKEMCIQANHFLSPDMDKALKAATANEESPLGKKILNQLQENLKIAGEDMIPICQDTGMAVFFIEIGQDVHFTGGVLEDAINEGVRQGYTDGYLRKSVVKDPLIRENTKDNTPAVIHYSIVSGDKVKITFAPKGFGSENMSRVFMLKPADGIEGVKNAILTAVSDAGPNACPPMVVGVGVGGTFEKCAIMAKKALTREAGTHSDIEYVAELEKEMLEKINNLGIGPGGLGGSTTALAVNINTYPTHIAGLPVAVNICCHVNRHVVKELLast
1 -4.470HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali follow..  9  16.MFQATVADFWMAGLELGVIKT-----NQRDEASPKEVCSGIPQFIIGVKGLAGFLGTSVSTVNRWKACGLLDDATLQCGKVVIFELPKVIEILRVSDKKNKFNVKSKK............................................................................................................................................................................ 118
2 -3.330PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  9  1..................MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPD-QTSGQLTIYNDLANVMIEEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVD-LLKGLDKELDEFLKNLLE........................................................................................................................ 147
3 -3.040HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  9  22.....HNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISV-KNTSGTFEGYFVDIKKSSYYGTVSATVPSGWLIPFTWIKVGRLITADDELAHVRLLVPHTYGTTSASASVYA............................................................................. 227
4 -2.660PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  13  18.............................................................................ENGMQKKVTEPYLVDALSFTEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADKLIFITLDEKSGAEKKTSTQVLVQAADLRDAVKKLDEGMKGT...................................................................................................... 124
5 -2.460PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  14  1MQHECKITVLETKVFPELQKAGDEFILKRTPEQDDFYHLMDGKFCGEAWDAISRYVYTALRMMIACCNDGTQPVIFIDIPENEEEREWLEKQNFKNTVDDAYT.................................................................................................................................................................................. 135
6 -2.240HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  12  3MTDNNDDVLVKKFFSE------------------NRIDVPDDGFSRRVMRRLPDRTRRISRLWTAVCVVIGLLIFFRNKG......................................................................................................................................................................................................... 64
7 -2.050PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  16  41.......ESMLKVGRELLNEGGNEIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTH--PDENDLKNARKAFE........................................................................................................................................................................................................... 119
8 -1.900PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  6  8.....QLAENKLVLLYIFDRVQFPLANIQLTQFIMENDIMNYFMLQQFIGELKESSFIMEQE-----KDTGQLFMITDQGKKLTYFISRIPEEKRLKIDHLLNIKKEEFVRNTEIKGEYEKLTDNEYLVKLSVIEQGTPIFNLKLSVGNVKQAKDMCE---RSDAQELYGQIINLL......................................................................................................... 173
9 -1.830HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  7  1.MKTLKITFVMLMTALFLVLPSCTPSEEVVNAFQQVKNVKWEILVGAYEAEFIYSGTYSENGQHIVLDKVEAQAYITQGGKEFDVTKDYQDSSSLVVPRAVRETIAAKGKKVDDVKLFDWSDRND---YFYVEFDEPDSELLINFDG...................................................................................................................................... 160
10 -1.790PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  11  79NLKNLTFDSAIRPCAKICEHLANAYYSKRDNEFKSKLKNEIQEIIETGFDWLITPQKIAVR--------AYTMNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS............................................................................................................................................................... 193
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.