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Query: gi|238922443|ref|YP_002935956.1| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLAEDRCKKILDILDSMGSVTVQQLMDELDTSESTIRRDLVAMDKKGYLTKVHGGAIVNNTNIHTQDEKVINRLKQNRNEKEQIARYAASLIVDNDFVYIDAGTTTAVMIDYITAKNVVFVTNSLTNAKRISDRGYTVYILGGEFKSTTEAIVGDEAVVTLDKYNFTKGFWGTNGITVKNGFTTPEIKEAMVKKKSMENSKEKYILADDSKFSQVSSIKFADFEDAVIITNALSNDNYKKYKNIKEVLast
1 -7.130PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  14  20PDLKTAMLGRIRADEPRKVWTPSDFVDL--ASRDAVDKTLQRLTKAEALRRIDRGLYDQPGFNKLTQKPNPPDPRS--VIDAVGRRDQTRMLVDGMTAANDLGLTDAV------PAKIVVHTDARRRAIKLGNATITF............................................................................................................. 147
2 -4.860HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali follow..  16  51..............IPQFIIGVKGLAGFLGTSVSTVNR----WKACGLLDDATGKVVIFELPKVIEILRVSDKKNKFNVKSKKYNGKESN............................................................................................................................................................. 125
3 -4.050HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali follow..  9  2....KEHKEVSALLQQAKQERRCCY-----GTSDAQRRALKRRLHAGELVSPYKNLYADRTL-----------NTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIAS-------IGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCA-LPIYDSALRKSLTTIEEVQSLMIQSVEVSVTKLLKYANPLS.................................... 197
4 -2.940HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali follow..  4  16LLQIEYYTEKEAFRKQTEQMGMQRKVKRDAWFPLRIGKSFYNSLNQNAIE---GRPVMFFKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQLSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFYSHRKAERYSFEPMRFPW............................................................................. 198
5 -2.730PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  12  29ILNSSAVKNAVTSVTGGKAVTFENLQGTWMYVNPAL-----QLEGDNALKNVAGSLAATE----------AEKKMKEYCAKVGIVEGVFNYVFNSDSTFVSPEDKTVTLRYTVGNKKLTVST--LTAHVVLSGNELTLLFNADKLLKFLSTVSSISSNTTLKAIEYDGMMLGFD......................................................................... 204
6 -2.710PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  12  1.......................................MAKIQIKSEQITPFGGIFCVMEEFDALLSNIIDSKTFGYQYSEIFRSLMCVYFCGGSCV-SCSADTILRAIKELTVPNITYTSSDFNMADRMNELLRQGTHIYRRIKRGT.................................................................................................. 139
7 -2.700PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  13  103...ENQLKDILETIIGVEDVSI--VVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGD---KETPVVVQTKKPDIR-GVLVVAQGVDNVQIKKT---------IIEAVTRVLDVPSHRVAVA............................................................................................................ 223
8 -2.460HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  7  120....AKYNTFLENITD---CPMEESKKEQWSAEVKCLRAYFFLN----LAFYYTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRGIWRLP............................................................................................................................................. 214
9 -1.930PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  7  34...KEGAVRSSRYGAPLPGCLPRWSLGRNARLLMVIPMDAETPGGRLLRPQAQ--VLSVRLDLDAARGKLGPEACEMERQRFDGVIAMMERNDGPTLVVTDSQAHPWTLDRSSGRPLVPITTFSIAMAYQQNGGRLDPFV-------------GLEALETLQD---DRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEHAFGREFPELESGGMDGLKLA.................. 258
10 -1.910PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  14  453..PNADRDYLFQKLGDETRTQLLEEAVAMGIKENTALTWLKRLTKHGKLISMDGKGL.............................................................................................................................................................................................. 508
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.