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Query: gi|238922446|ref|YP_002935959.1| chaperone protein DnaK (EUBREC_0020) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGKVIGIDLGTTNSCVAVLENNQPVVITNSEGQRTTPSVVAFTKNGERLVGEAAKRQAAVNVDRTFFSIKRQMGSDFRAKVDGKLYSAPEISSMILRKLKKDAEDYIGEAVTDAVITVPAYFSDAQRQATKDAGRIAGLNVLRIINEPTSAALAYGLDHGQQQKILVYDLGGGTFDVSVIEIGDNLIEVLATAGDNHLGGDDFDERITNYLVTEFYRQQNVDLRKDNTAMQRVREEAEKAKKVLSSSSSTTINLPFITTVKGQPVHMEMNLTRAEFNEITKDLVERTAIPVNQALSDAGISAAELGMVLLVGGSTRVPAVVEEVRRITGKEPSHNLNPDECVALGAAVQGGKLGGAIVAGSSAAEIILMDVTPLSLGIETVGGVSTKIIDRNTTIPTRYSQIFTTAGSFQTSVDIKVLQGERQFARDNKLIGNFRLKGIKPAPAGVPQIEVTFDIDANGIVQVSAKDLGTGKHQEITITASSNLSDSEIEQAIREAQEYEATDGQRKAYIDARSEADTLVRQVENVMADKEKRKAMDSAQKKSVKSSLSYVKKLISRTKPGNVSEEQAAEIKHAADELRNAAAGLILast
1 -7.910PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  10  2..........................................................................................IGIFFQKTLKALETVCEGAEVGFITITMED-VDLATADALKRAAASMGIGAQLLLESHRLSYEYYALSQRREHDVGLFEYDRRGLRYHHLSVSWK-------------------------------------------------------------HHPPVVTAETTVLNQYLDGHELADPVPPEMDRQFLEAIKEV------------SARRMISTYYLMGGAESGKSWMNLSLKQLCAMKRHVFAGQNLYARGACYHSFDQGSFGRKPGFI--AANAGLLTKDIYLRSVHKQKLILAAAGTP---SAVSRKAIIIDGQEQLIIRM----RDPLTNFEQTVVMTLDALPQRPPKTTKLLIETSFQSETDCHIRVTDMGFGE.................................................................................................................. 313
2 -3.640PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  14  5...................................................................................................................VTFPP-----------------GRPLSNFLLEGTIMKLT-----------VYFD---GTFWFALVEHVNRKGQYKVFR----FGKEPKDSDIWNFIAKKLPSHADSIPQPKKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQ.................................................................................................................................................................................................................................................................................................................... 146
3 -3.140PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  15  13.....................................................................................................................................................VLTMCSAFSLKKGHSKTVYAFGAASFTDTVVYFTD-LDSAKVSKEGFLTHRDLYSYQLKNYVEDNGLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTVT............................................................................................................................................................................................................................................................................................................................................. 119
4 -2.110HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  20  28......................................................................................................DERGAGTVLVVGVIAV-AQAAAGRSRAAADLAALGGATALSSIVAPGPCEAASRVARANGAEVTTCSVTGEDVVVEVVLGVSRPAVSSARAG........................................................................................................................................................................................................................................................................................................................................................................................................ 137
5 -2.090PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  11  1................................................................................................................................................IKEELVRCIKKNLRTDDGLRLEILSPGGPDFKHAEFFLEGGSVEIHVFASDWIHHKHENQDAVCLHVVMWNDLKGRCVKNFSYAGDERILQKAKKYEKWIENKPFERVLYEAIMES------LGYKNNKKPFLMLASLVTAETIQSFVPEYTPAQEKKIIAQSLLLMAGFDRIFSTWQGIKPKIHQTPLTGIRPANFPDRRIVAIANILSEHLDNGNEFLSPFLETHDAYNKPQKLLGKERTSNIFVNVIIPVMLVYARKHNDKALEERLHYIY--RNYTPHPSTSVTKFMGTRI--GTSMVSNKVIHSARRQQGLYQL........................................................................................................................... 455
6 -1.970PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  14  66...................................................................................KVWPYAKLASERLSELNARLASIKSKSERRKYTKIEEQFAAELKKLTRTEGQI----LVKLIHRQTGVT-TFQLIKNLRSRAFWYDTTAGLFDIEL-----------KSEYNPVNNRED---FLIEDILQRSFQRNILD............................................................................................................................................................................................................................................................................................................................................................................ 192
7 -1.950PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  13  12.................................................................................................................ALFMLTSCSMFEIDNYEEPSETIWG----EVVDEATGKRVLTDQGSEG--RVRLTELSDGTFQNT--KIFKGEYNVRIDG......................................................................................................................................................................................................................................................................................................................................................................................................... 99
8 -1.850PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  10  4...................................................................................................................ISVPRDLTKVKSKV------MFNLTKRQLICFGMAVLIG----------VPSFFLMKTVMKTNTAVM---IMMPFFFLAMYEKNGQPLEVILEHMIQAIFQRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQK............................................................................................................................................................................................................................................................................................................................................... 124
9 -1.840HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  11  129...................................ITDCPMEESKKEQWSAEVKCLRAYF-----FLNLAFYYT---DVPMPLKTLSVDE-ANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRGIWRLPGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 217
10 -1.650PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  13  1...............................................................................................................................STQTSASVLNLIN-QTILKDAAATAL-YG-SRGANGVVLITTKSGRRGKTHIFTAEYGTSDFATPHALDYMDAGQY............................................................................................................................................................................................................................................................................................................................................................................................... 80
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.