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Query: gi|238922447|ref|YP_002935960.1| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTEQSRNHAEREFRKKGDQIVWDASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKNMKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRNKEIERQKNAGKPVEERTIDNEEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAKAAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGKLast
1 -4.270PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  14  71.TAADTVRNNANEYNALLNGD-----AADAAAVKAEQVKDTVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKAKTNLTAKLDEASKLLADSDGKVAD................................................................................................................................................................... 197
2 -4.090PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  9  22VTLKRMPQPVTALLAAMITPAVLISGAGTLIMSTSTRVGRATDRVRG-LTSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFL.......................................................................................................................................................................................................... 108
3 -3.550PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  8  1..........MDTIDNFLDA---------APYPASTRLTDAKVELRAMMEDAYADAIASGMTHNEAVGRV-GNLQEIAPVLGIADDLTAAEKAPQPEAAPAPAGTEGVGAPSRPRVTLPEAQELAEARRRGA.............................................................................................................................................................. 118
4 -3.320PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  10  74.KWEKQYNSYLKTASGYASSLKAC----THLYNDGVRIFLTLGKLGKAIQNN-PQGIVASMNMNNLYIETATELVSVFTLLN----DAVAKGSNENMLTGAERSKTLWALNDQLSDFSRKLHLLYLSI.................................................................................................................................................................. 191
5 -3.060PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  6  194..................DDDRYFHLQKADLVWPNWQAFWMLGDAARELPDNSWQKHRARELGNLVMNMFDPEDVSTVDKCRKFLQKEFFDK...................................................................................................................................................................................................... 273
6 -2.940PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]  ali follow..  9  35FAGTAGSDEIIADIEARIAELFYEKMENERQVITQKEVDAVIAIMGQ--PEDYQVDEDIFEDVPPGTGSAKSRTTR...................................................................................................................................................................................................................... 108
7 -2.930HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  12  2MRRKNITWVWLLGAAFMVGCGKQVP----ENIIQPDRMENILYDYHL--------SISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSMVWYTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPG........................................................................................................................................................ 127
8 -2.880HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574;  ali follow..  10  2...DEAVAMAQDAIGLMLEDCEVCPKPSLPFDMEEYQKQFKPVKKTLSIPGWLNDAESAHINFSSVLQKGLKSELGMI.................................................................................................................................................................................................................... 92
9 -2.670PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  12  16......LLYIFDRVQFPLANIQLTQFIMENDIMNYFMLQQFIGELKES--SFIMEQEKDTGQLFMITDQGKKTLTYFISRIPEEKRLKIDHLLNIKKEEFVRNTEIKGEYEKLTDKLSVGNVKQAKDMCEKWRSDAQELYGQI................................................................................................................................................... 169
10 -2.550HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  10  64SRNSKKHQANVKTARLYISH-----IQVLNLAVIRMEI---LPVDNFSVPD-LSSEASLAEWGQKIIEGERKRTSQ-IYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQLASMRVQADRLILDIWNQVEAKFQDVSPNEKRLEKCRDY.......................................................................................................................................... 219
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.