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Query: gi|238922451|ref|YP_002935964.1| hypothetical protein (EUBREC_0025) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEETGKAGKKSNIEINADKGAKQNSHPGREEWPHLIRIGVMVFVTFAVSILFFFALYRFEGFAGIWSKLLAAAMPIIMGLVLAYLMNPVMLWLERCFKKLLSKKMKSESKLRKVSRALAITGSVIILVAIISLLIAAIVPSVIASISGLMKTLPNDVAAFINMIKNGNFGDSKIAELASTGLQNATDYIENYATEKLIPEAQKYVAQITTGVISIVRGLFNFIIGIIVMVYVMSIQETLAGQSKKIIYAVCKPKTGNIIIETIRKTNEIFGGFISGKIIDSLIIGVIAYFGCLILRIPSSVLVAVIIGVTNVIPVFGPFIGAIPSLLIVVIQSPWHALYLLIFIVVLQQVDGNIIGPKILGSSTGLSTFWVMFAILIGGGMFGFLGMLLGVPTFAVIYYIVKRVVNYALRKKKLPEDTRDYTKTTGVDTKNNKLKYELast
1 -6.590HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  8  33.......................................................................................................................................................................................................................................VTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLVIGFILKFF-IILAGIFLLPPLVLVVFILVVVTFALLMGGAGFIYNLSPFGADLINGAPLSMAIMGCIGTILFIGIPIFSLIYAICSQLFKIRPLPTQARWILLALLISFILCGVYIHQSGMLY................................................ 190
2 -4.120PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  11  9....................................................................................................................................................................................................................................................................DLTKVKSKVMFNLTKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFF----------FLAMYEKNGQPL------ILEHMIQAIFQRPKI.............................................................................. 93
3 -3.960PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  9  1MNENDKTEILEPVETPAENITEPSKDGRKCPKWLLPLVAAVCAVILVVAGIIGWNAYSGAKLAEAKEACVTAADT----------VRNNANEYNALLNGDAADAAAVKAEQVKDSKTVES----------LGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEASKLLADSDGKVAD............................................................................................................................................................................................................................ 197
4 -3.420PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  3  54SHDYSGYRPRIRGTFVEGTQHLKERQLQGETQSTRSGRTLRTLALLIAVCLLSWLVFKV.......................................................................................................................................................................................................................................................................................................................................................................................... 112
5 -3.340HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  13  2..................................................................................................................................................................................................................................................................FEYILREIFLSVIAFLAGAGVSAGVFAFVLVIGVVIILIENVMICGVVAGNISSV--VSNICGNIIIAIYGLCVGIFVGCIAVALAEILHTF------P-IIYKRMKLRA-IIVISMAIG-KALG...................................................... 145
6 -2.960HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  8  5.....KVSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVAVVVGFESDLLEVGA----DVFVKYQMLMLMEVLTICFIPMALKMFSLSAVRRRLKADRVRGLVLFGSCRLAMIGVPLVANTILYYMSMSVAYGYMAIIGGL............................................................................................................................................................................................................................................................................................ 151
7 -2.710PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  9  137...................................................................................................................................................................................................................................................TELKESFVPTDSISQAIHFFSDTHASYFMIIFALFVGVYLF--LQLVYFNDIDSVYPLFLCLLMAFSATVPTLSPFKVPFILSVFLLS------LFLIVALAVLDDLFRQLTPAAAVFYLLGLMSSCIFCYFFFILMTHIYIGYLF................................................ 301
8 -2.680PB006933 gi|1881301|dbj|BAA19328.1| SIMILAR TO ORF13 OF ENTEROCOCCUS FAECALIS TRANSPOSON TN916. [Bacillus subtilis]  ali follow..  9  1..KEESFFRSAFQKLKRIERPEKDKQKVPRDRSKLIAVTLWSCVGSLLFICLLAVLLSINTRSQLNDMKDETAENFLSGFINEYMMQSLESYMVKQEDNHFEDEERFNVDGLKGDRELKGYSLYLFQYKVTYENMLLNIPVTNKGDSFAVSAVPYFTQIYDLKGDIAFKGKEETRDEYAGEKKESIESFLQNFFEKYASEKKEEMVYMMKKPEALEGNL.......................................................................................................................................................................................................................... 287
9 -2.490PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  11  2KEKESKSIIVYCFGSYMNYMRRQYEIMGYRLPRAVTWRALGYFAAVEAGLVAFRFLPPFKWIFGDMIDQVWLMYYGVIPLFLVWGAKSLFSFVRSWITFRLRKHQSSRLVNVPKLKKHVF............................................................................................................................................................................................................................................................................................................................. 128
10 -2.370HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  11  10........................................................................................................................................................................................................................................................................................IVMLVVVLAITCLMATTAFAAGTGDVAGAVE-----STWSTASTQIKSVVDNVVFPAIDLILAVFFFAKLGTAYFEYRKSGQFEWAAPAILVFTLTAPMYLWSIIGI.................................................. 115
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 2 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.