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Query: gi|238922447|ref|YP_002935960.1| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTEQSRNHAEREFRKKGDQIVWDASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKNMKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRNKEIERQKNAGKPVEERTIDNEEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAKAAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGKLast
1 -5.470sp|P04114|APOB_HUMAN Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 SV=2  ali   431.KYRAALGKLPQQANDYLNS-EKLTALTKKYRITENDIQIALDDAKINFNEKLSQLQTYMIQFDQYIKDSKIAIANIIDEIIEKLKSLDEHYHINLVKTIHDLHLFIEN---DFNKSGSSTASWIQNV.................................................................................................................................................................. 573
2 -5.220sp|Q5T1A1|DCST2_HUMAN DC-STAMP domain-containing protein 2 OS=Homo sapiens GN=DCST2 PE=2 SV=2  ali   37......CANTLRNFTRASEA----------VACGAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSIMDGVKHILRNVWQWLLHIGDVCNSELGNPYLKCARVFDDAKDSCMMVIPQA.............................................................................................................................................................. 155
3 -5.210sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3  ali   8......LLQYLENLEKLMYNASPPKVIRTFFYTNRQTCQDWLTRIRLSIAVTVRHGFDLLTEMKTTSLSQGNELEVTIMMCELHCPEAIQGIAVWSSSIVGKNLLWINSVAQQAEGRFEKASVEYQEHLCAMTGVDCCISS..................................................................................................................................................... 166
4 -5.160sp|Q5BKU6|YP026_HUMAN Putative uncharacterized protein LOC641298 OS=Homo sapiens PE=5 SV=2  ali   8......LLQYLENLEKLMYNA-ALTSPPKVIYTNRQTCQDWLTRIRLSIAVTVRHGFDLLTEMKTTSLSQGNELEVSIMMCELHCPEAIQGIAVWSSSIVGKHLLWINSVAQQAEGRFEKASVEYQEHLCAMTGVDCCISS..................................................................................................................................................... 166
5 -5.030tr|F5H6J9|F5H6J9_HUMAN Uncharacterized protein OS=Homo sapiens GN=ASCC2 PE=4 SV=1  ali   5.....PLDQLQITHKDPKTGKLRTSPAL---VIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLHRSVFLTFLRSTHKESKILDLCVLFGKGNSPLLQKMIGNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQ.................................................................................................................................................... 139
6 -4.980sp|Q15111|PLCL1_HUMAN Inactive phospholipase C-like protein 1 OS=Homo sapiens GN=PLCL1 PE=1 SV=3  ali   44LPPIASLKQCLLTLSSRLITSDNTP-PLGAIPDVQKKMLTAYDLMIQESRFLIEMADTVQEKIVQCQKAGMEFHEELHNLGAKKATESFAWNITVLKGQGDLLKNAKNEAIENMKQIQLAC......................................................................................................................................................................... 186
7 -4.910sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1  ali   10  348..EEKLVSDFLIQTFKVFQKNQV---GPCKYLNVYKKYVDLLDNTAEQNIAAFLKENHDIDDFVTKINAIKKRRNEIASMNITVPLAMFCDATALNHDLCERAQNLKDHLIQFQVDVNRDTNTSICNQYSHIADKVSEVPANTKELVSLIEFLKKSSAVTVFKLRR............................................................................................................................ 509
8 -4.870sp|Q9UPR0|PLCL2_HUMAN Inactive phospholipase C-like protein 2 OS=Homo sapiens GN=PLCL2 PE=1 SV=2  ali   41LSSVANLMQCMLAVSPRFLGPDNTP-LQGIVPEVLKKIVTTYDMMIQSLKALIENADAVYEKIVHCQKAAMEFHEHLHSIGTKKAVESFTWNITILKGQADLLKYAKNETLENLKQIHFAA......................................................................................................................................................................... 183
9 -4.860sp|Q9P1Q0|VPS54_HUMAN Vacuolar protein sorting-associated protein 54 OS=Homo sapiens GN=VPS54 PE=1 SV=2  ali   12  1.........MIAEFSTYSHSDLNRPLEDDCQVLEEERLISLVFGL------KQRKLNFLEIYGEKMVITAKNIIKQCVINKVSQTEEIDTDVVVKL------ADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLS................................................................................................................................................. 125
10 -4.840sp|Q96M86|DNHD1_HUMAN Dynein heavy chain domain-containing protein 1 OS=Homo sapiens GN=DNHD1 PE=1 SV=2  ali   60LDNNPKIQQALNIQQVLLEGVLC---KVQEFCREHHWITGIYEFLQSWGPQKLEDMRKNYVTLVSRLNVWQARVSSMPIELLTKGGLLLLSCHDVQAEMESKLNSIRKDILAHVQNECWNLSQQLMTELTDFMHIFRTINSDIHAIAQCTQKLNEANEQYVELEERME.......................................................................................................................... 228

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.