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Query: gi|238922448|ref|YP_002935961.1| DNA-binding response regulator (EUBREC_0022) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTILVCDDDKEIVEAIEIYLMQEGYDVEKAYDGIQAVEIMKNKKIDLMIIDVMMPKLDGIRATLQIRKESRVPIIILSAKTEDADKILGLNVGADDYVTKPFNPLELVARVKSQLRRYTTLSSNDAAGDKVYEAGGLLVNDDLKKVTVDGEEVKLTPIEYNILLLLLKNKGKVYSINEIYESIWNEEAIGADNTVAVHIRHIREKIEINPKEPRYLKVVWGVGYKIEDNKLast
1 -32.800sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 OS=Homo sapiens GN=SOHLH2 PE=2 SV=2  ali   12  19IDILLVGDVTYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVSSLSAEELEAIKLIRFNTHSLFVFIIPENFKGC----SGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATG..................................................................................................... 151
2 -6.940sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2  ali   11  85............................................................SSLEVMMLCSECPTVFVDAETLMSCGLL-LQEHLDTYNVKREAAEQWLDDCKRTFGAKEDMYRINTDAQQMEILAELELCRRLYKLH------------FQLLLLF--------AYCKLINQVNTIKNEAEVINMSEELAQLESIL........................ 219
3 -4.930tr|E7ETP3|E7ETP3_HUMAN Uncharacterized protein OS=Homo sapiens GN=LHX3 PE=3 SV=1  ali   14  6...............................................LLSSLVYPD-TSLGLVPSGAPGGPPPMRVLAGNGPSSDLSTGSSGGYPDFPASPAS............................................................................................................................... 60
4 -4.640sp|Q9P1Q0|VPS54_HUMAN Vacuolar protein sorting-associated protein 54 OS=Homo sapiens GN=VPS54 PE=1 SV=2  ali   18..................................................................................................................................................................LPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKE......................... 60
5 -4.630sp|Q86XD5|F131B_HUMAN Protein FAM131B OS=Homo sapiens GN=FAM131B PE=1 SV=3  ali   24  11.........................................................DTTSILPKLKRNSNAYGIGALAKSS----FSGISRSMKDHVTKPTAMGQ--GRVAHMIE.................................................................................................................. 63
6 -4.540sp|Q96AQ9|F131C_HUMAN Protein FAM131C OS=Homo sapiens GN=FAM131C PE=2 SV=2  ali   18  66............................................................GYLSDSRSRPGNYNVAALATSS----LVGVVQSIKDHITKPTAMAR--GRVAHLIE.................................................................................................................. 115
7 -4.420sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=2  ali   20  4........EKELIEDLKSLRHKQVIHPGLQEVGLKLNSVDPTMSIDLKYLGVQLPPFWNLTGTNPASPDAGFPFVSRTGKTNDFTKIKG............................................................................................................................................. 91
8 -4.390tr|Q5TDC2|Q5TDC2_HUMAN Mitochondrial carrier homolog 1 (C. elegans) OS=Homo sapiens GN=MTCH1 PE=2 SV=1  ali   15  5.............NLLAHFINAYLVDDSVIQPGPGHPELYQVRDGDC--ADLPLPASWRPHGCEQLRAASWAPVQILDSLLEVPECAACFSAGCHQDHALPWSNLNHLKNTVSTARRLQPNNNQMCSSPAGLQFHICHVSVQ........................................................................................ 152
9 -4.280sp|Q8TE77|SSH3_HUMAN Protein phosphatase Slingshot homolog 3 OS=Homo sapiens GN=SSH3 PE=1 SV=2  ali   10  2..VQLLRPQDDIRLAAQLEAPRPPRLRYLLVVSTREGEGLSQDETVLLGVDFPDSSSPSCTL---------LPLWSDTQVYLDGDGGFSVTSGGQSRIFKPISIQTMWATLQVLHQACEAALGSG......................................................................................................... 118
10 -4.090sp|Q9NUX5|POTE1_HUMAN Protection of telomeres protein 1 OS=Homo sapiens GN=POT1 PE=1 SV=1  ali   16  52VAVHFVKNNGILPLSNECLLLIEG-EICKLSNKFNSVIPVRSGHEDLELLDLSAPFL-GCKQCSSLRSIQNLNSLVDKTSWIPSSVAEALGIVPLQYV.................................................................................................................................... 159

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.