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Query: gi|238922440|ref|YP_002935953.1| hypothetical protein (EUBREC_0008) [Eubacterium rectale ATCC 33656], from E.rectale

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .
# Score Template Links and tools%idFirst MLYVFPFFSPDSFIFTVFLFFQHNITCNNYSFLITLHISLFHYSCNNLast
1 -4.490[KT] COG3835 Sugar diacid utilization regulator  ali follow..  16  315..........GQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEK 351
2 -4.180[S] COG1547 Uncharacterized conserved protein  ali follow..  14  19......YFECHEVLEERWKQDPPGRRKPHWVALIQIAVGLYHERRGN 59
3 -4.110[UR] KOG4677 Golgi integral membrane protein  ali follow..  21  508..........DSTAFKLLSMLRGHPSARLFFYFIIMHLWLFF..... 541
4 -3.830[S] COG5134 Uncharacterized conserved protein  ali follow..  22  4..YIPPEGPNAKRRNVIRFEMPFPVWCNNCENIITTKIWSFSLKCHL 70
5 -3.740[T] KOG3979 FGF receptor activating protein 1  ali follow..  13  172...........TIFPLIYWYIQHKFKHIPGAYTV---YAFFEWS... 201
6 -3.730[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)  ali follow..  17  106LVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTMHFSLMHILFN. 154
7 -3.710[S] KOG2969 Uncharacterized conserved protein  ali follow..  37  3.................YAAFQHNVS----GFLVNAKQTDFN--CLN 26
8 -3.710[R] COG5236 Uncharacterized conserved protein, contains RING Zn-finger  ali follow..  25  194.......FPCELEIFTQNQLRNHQTKCSGKRFYLYIHMRNQHEKCH. 250
9 -3.710[S] KOG2885 Uncharacterized conserved protein  ali follow..  18  5....................LEERLRANSSAFLLALIPAKYYYDEKS 33
10 -3.690[O] KOG3488 Dolichol phosphate-mannose regulatory protein (DPM2)  ali follow..  38  27.VIILPFVDSDHFIHKYFL............................ 44

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 5 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.