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Query: gi|15644652|ref|NP_206821.1| chemotaxis protein (cheV) (HP0019) [Helicobacter pylori 26695], from H.pylori

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKSNPKDIQRVVKQFLELALast
1 -26.100sp|O95263|PDE8B_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8B OS=Homo sapiens GN=PDE8B PE=1 SV=2  ali   11  136.....................................................................................................................................................................................................LIFAKEDSQS--DGFWWACDRAGYRCNIARTPESALECFLDKHH-----EIIVIDHRQTQFDAEAVCRSIRATNPSEHTVILAVVSRVSDDHEEASLHAGFNRRFMENSIIACYNELIQIEH.. 256
2 -15.900sp|O60658|PDE8A_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8A OS=Homo sapiens GN=PDE8A PE=1 SV=2  ali   12  62.................................................................................................................................................................................KVAVADVQFGPMRFHQDQLQVLLVFTKEDNQCNGFCRACEKAGFKCTVTKEAQAVLACFLD-----KHHDIIIIDHRNPRLDAEALCRSIRSSKLSENTVIVGVVRRVDREELSVMPFISAGFTRRYVENPNIMACYNELLQLE 201
3 -9.400sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2  ali   7  15...................................................................................................ANPHDRVVALRRVTAAAQVLLARTMVMRALSL----------SVSGSSCSLAAGLESLGLTDIRTLVRLMCLAAARSRGGHSKANKPISCLAYLSTAVGCLASNAPSAAKLLVQLCTQN--LISAATGVNLTTVDDSIQRKFLPSFLRGIAEENKLVTSPNFVVTQALVALLADKGAKLRPNYDKSEVE................................. 209
4 -8.520sp|O95263|PDE8B_HUMAN High affinity cAMP-specific and IBMX-insensitive 3`,5`-cyclic phosphodiesterase 8B OS=Homo sapiens GN=PDE8B PE=1 SV=2  ali   13  1......................................................................................................................................................................................................................ACDRAGYRCNIARTPESALECFLDKHH-----EIIVIDHRQTQFDAEAVCRSIRATNPSEHTVILAVVSRVSDDHEE.............................. 73
5 -8.450sp|O43598|RCL_HUMAN Deoxyribonucleoside 5`-monophosphate N-glycosidase OS=Homo sapiens GN=RCL PE=1 SV=1  ali follow..  6  2.................................................................................................................................................................................AAAMVPGRSESWERGEPGRPALYFCREDRTLYERIVSRLRRFGTVLTEEEAAGGDRLIHEQDLEWLQQADVVVAEVTQPSLGGYELGRAVA-----FNKRILCLFRPQSGRVLSAMIRGAADGQVWDYEEGEVEALLDRYFEAD 161
6 -6.720sp|Q9UBZ9|REV1_HUMAN DNA repair protein REV1 OS=Homo sapiens GN=REV1 PE=1 SV=1  ali   12  218...............................................................................................................................................................................................................LTEFVNTLQRQSN-KMKTGRSALVVTDTGDMSVLNSPRHQSCIMHVDM---DCFFVSVGIRNRPDLKGKPVAVTSNR..................................... 300
7 -6.320sp|Q6UB35|C1TM_HUMAN Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Homo sapiens GN=MTHFD1L PE=1 SV=1  ali   11  65.................................................................................................................................................................GRTPAARDSIVREVIQNSKEVLSLLQEKNPAFKPVLAIIQAGDDNLMQEINQNLAEEAGLNITHICSEAEIIDEILKINEDTRVHGLA---LQISEVDGVNLGKLVRGDAHECFVSIELLEKSGVNLDGKKILVVGAHGSLEAALQCLFQR......... 242
8 -6.230sp|Q8IXI1|MIRO2_HUMAN Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2  ali   11  2.................................................................................................................................................................................................................GYAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDP--KSFAHCASVYKHYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPPSTTIFTQLATMA 124
9 -6.100sp|P22033|MUTA_HUMAN Methylmalonyl-CoA mutase, mitochondrial OS=Homo sapiens GN=MUT PE=1 SV=4  ali   9  148...................................................................................................................................................................................TSAIKRVHKFMEREGRRPRLLVADGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHA-VGISTLAAGHKTLVPELIKELNSLGRPDILVMC-GGVIPPQDYEFLFEVGVSNVFPGTRIPKAAVQVLDDIEKC 292
10 -5.950sp|Q9NXH9|TRM1_HUMAN(removed signalp:1-21) N(2),N(2)-dimethylguanosine tRNA methyltransferase OS=Homo sapiens GN=TRMT1 PE=1 SV=1  ali   12  133..................................................................................................................................................................LHVLEG----------LAASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLR 281
FFAS is supported by the NIH grant R01-GM087218-01
1 4 4 8 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.