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current user: public |
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Query: sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1, from H.sapiens |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 | |||||||
# | Score | Template | Links and tools | %id | First | MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKCLGPAFTPATRAAWSQLYGAVVQAMSRGWDGE | Last |
1 | -55.400 | [C] COG1017 Hemoglobin-like flavoprotein | ali follow.. | 18 | 2 | LDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNM------------SNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGTHLLATLDEMFN--PGQEVLDAWGKAYGVLANVFIHREAE. | 137 |
2 | -24.100 | [C] KOG3378 Globins and related hemoproteins | ali follow.. | 16 | 259 | ITERQKHIFTETFPVIFKEYKRNGLVLFAKYFSEFPHYKNIWPQ---RTLQDSALLASNELANHCSVYMSGLKV............................................................................. | 330 |
3 | -9.550 | [R] COG2346 Truncated hemoglobins | ali follow.. | 5 | 33 | ................DATVRALTRRFYELM-DTLPEAARCRA------------IHPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFVAPIGPAERDEWLLCFRRAMDET---IENAKLREIIWAPVERLAFHMQNQEADN | 150 |
4 | -5.550 | [U] KOG3316 Transport protein particle (TRAPP) complex subunit | ali follow.. | 13 | 11 | ....................................EIIRSTLESEKDRCEAKEKFGTIIDNLNGPADIEKYESLVQKAFLHANAETKLESIGFR-------------VGRQLVEKVSKESPKLVT--CKDFWSSVFGKQVDNLRTNHQGV | 118 |
5 | -5.210 | [A] KOG2412 Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor | ali follow.. | 10 | 328 | LNFIAKAVVHQAETEVRVKPESA-GKLTLYLLVQFPELQELFQNMGWKRNNENKWEDNTSYDERMGGILSLFAIITRLQLPQEFITTTSHPFPIALS-CNTPLNLITNTHFVILGSWWDAAAVQFLQAYGNQASKLLILIGEELTSRMAEK | 510 |
6 | -5.210 | [K] COG1733 Predicted transcriptional regulators | ali follow.. | 16 | 13 | ..SMAAEVLCTRWTMVLMRELVAGSTRFNDLRRGVPKMSPTLLSQRLKELELAGIVERKEVPGEKGIFDYRLTEAGRDLRP---VVEAMGFWGQKWVESRLSLKNLDP--SLLMWDMRRNLNPSPLPEGRTV................... | 137 |
7 | -5.170 | [R] COG3324 Predicted enzyme related to lactoylglutathione lyase | ali follow.. | 11 | 13 | ...........CWIDLTTSDVDRAQDFYGTVFESAGPDYGGYINAAKGGHPVAGLMANRPEFQSPDGWATYF-----HTVDIGATVAKLAAAGGS-----SCLDPMEVPGKGFMSLAVDPSGAAFGEAGSPVWHQLTTRDYRSVIDFYRQ. | 159 |
8 | -5.150 | [S] COG3945 Uncharacterized conserved protein | ali follow.. | 14 | 46 | ...........................FVDNCHHVKEEKVLFDFLEHKGMVGGPIYVMVYEHNKLRDIINRIEARYNEFEELREDLNSLIVLLASHIDKE-NNVLFPTAESLLIYEKFERIEEEFGKERHERYIELIDTLYGRYINKKSNE | 175 |
9 | -5.020 | [S] COG3195 Uncharacterized protein conserved in bacteria | ali follow.. | 10 | 36 | ........AGNVHSALCNAFRAASPAERLRVLRAHPDLAGKLAVAGELTADSKAEQASAGLDRLSPEEHSRFTGLNTTYTKKFGFPFIIAVKGLT--------------KEDILAAFERRIDNSKEEEFETACAEVERIARLRLRSMLPGD | 164 |
10 | -4.970 | [R] COG2316 Predicted hydrolase (HD superfamily) | ali follow.. | 10 | 12 | ....................................................KTHVKTKNLVKHCLAAEAVMRALAREFNEKWGLAGLLHDLDYEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVA..... | 116 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review. |