current user: public

If you have questions about the server, please let us know.

Query: sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540
# Score Template Links and tools%idFirst MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPELIQVKSELPLDPLPVPTEEGNPLLKHYRGPAGDATVASEKESVMLast
1 -7.270IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]  ali follow..  14  35.........................................................TVALLILGIAIGLAHRGNAFTDNIGETLSLASEIDPHLFL----FLFLPTL---IFESAFAMEVHLFRRMFTQIVILAVPGLMLAILTAELVAWVLPEHWQWSWALC------------------MFGALISATDPVAVV-ALLKEVS------------SRKRLETLIEGESLLAIVFFSLFYGWVLMEFSNPGEAIT---APPWQAVAQFFVVVFVGLAVGLILGGLCILWIDRVFNDPMIEISLTIAAAYSAFFISENFHVSGVVAVV-----------TLAIMFASVGRTRISPEVAGFLHHFWEMMAHMANTLIFLL-VGILVAIR-YLGIMAIRACSITVFMPILKRIGIGITYEKAVVLCWGGLRGAVSLALAMTVASSDIIPKQIGDHVLFLCAGIVV-----TILFNGSTMGHVL............................................................ 424
2 -5.900IDP90169 gene: CPXV008 CDS; CPXV008 protein AAM13454.1 [Cowpox virus (Brighton Red)]  ali follow..  12  57................................................................................................IKIVRLLLTPLIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDL----LLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKNNYPLHDYVVRFIVENNGHMAINHVSN--LCMYGLILSRFNNCGYETILIDVFDILSKYMDDIDMTLLYYAARRLLEY--ASVNTTSRSIINTAI........................................................... 500
3 -5.200IDP06321 ABC transporter permease [Streptococcus pneumoniae TIGR4] NP_345398 [Streptococcus pneumoniae TIGR4]  ali follow..  11  1...................................................................................................MFRLTNKLAVSNL-------------IKNRKLYYPFALAVLLAVTITYLFYSLT-------FNPKIAEIRGGTTIQATLGFGMFVVTLASAIIVLYANSFVMKNRSKELGIYGML---LEKRHLISMTFKELVVFGILTVGAGIGIGALFDK-----------------------------LIFAFLLKLMKLKVELVATFQMNVVIAVLVVFGLIFLGLMF---ALRIARMNALQLSRE-KRGRFLPLQTILGSISLGIGYYLALTVTDPLTALTTFFLAVLLVI---GTYLLFNAGITVFLQIKNKKYYYQPNNLISVSNLIFRMKK----NAVGLATIAILSTMVLVTMSAATSI.................................................................................... 306
4 -5.130IDP00222 putative binding protein-dependent transport system, inner-membrane component YPO3049 [Yersinia pestis CO92]  ali follow..  10  77.........................................................VVIAIPLGGILAFLMIRT--------------DLPGRRIIEPL--ILVPIFVSPMVLGFGYVVAGPVGFFSLWAESLLFVPWNIYAMSSIVVIAGLT----SSALRSVGSDVEEAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLML------VLGDPEGNLVLATYLYQLTNKLGTPSYHLMAAVAVVLI------CITIPLVMLQHMLMRTAHRFVTVKGKASQARALPLGKWRWVAGAVVAFWLTVTIGVPLVGVVLRAFVSNNLLRAIVNSMAIGVFGGALAVICYLFIGIAMHRKPDGTRFLDYSVLVPRAV----PGLLAGLAFLWVFLFLPMWLDRSTIFSVWLAYTVVWMAYG------LRLISSTLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWL........................................................... 522
5 -4.760IDP06205 molybdenum ABC transporter permease (modB) [Helicobacter pylori 26695] NP_207272 [Helicobacter pylori 26695]  ali follow..  12  15.................................................................................................................................................................................................................................LALITTLILLPVGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSL-------------------------------FMVSPIKSALISLPASLKEASYSLGKGYTLFFVLLPNIKPSLLMAIITTFTHTIGEFGVVMMLGGDILGETRVASIAIFNEAEALNYSKAHQYALTLTLISFSL............................................................................................. 209
6 -4.750IDP91902 phosphate ABC transporter, permease protein PstA [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007650 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  25......................................................................................................................................................................................................................................LASLILYILVRGLPLTGRSSAFQAGGGIGIQLYNSFFLLVITLIISVPLSMGAGI---LAEYAKKGP---------VTNFVRTCIEILSSLPSVVVGLFGYLIFVVQFEYGFSIISG-ALALTVFNLPQMTRNVEDSLHVHHTQREAGLALGIS-TVVHVVIPEALPGIVTGVVLASGRIFGEAAALIYTAGQSAPALDWSQAETLAVHIWKVNSEGTIPDGTIVSAGSAAVLLIFILIFNFGARKFGSYLHKKLTAA..................................................... 294
7 -4.700IDP06236 PTS system mannitol-specific transporter subunit IIBC [Streptococcus pneumoniae TIGR4] NP_344918 [Streptococcus pneumoniae TIGR4]  ali follow..  14  57......................................................MLTYLLPILIGYTGGYMIHGQRG------------AVVGAI-VGAITGSSVPMFIGAMVMGIKKFDEKFQEKIGFEMLVNNFSAGLVGFALLLLAFYAIGPVVSTLTGAVGNGVEAIVNAR--LPMANIIIEPAKVLFLNNALNHGIFTPLGVEQVAQAGKSIL---FLLEANPGPGLGILLAYAVFGKGSAKSSSWGAMVIHFFGGIHEIYFPYV-----MKPTLFLAAMAGGISGTFTFQLLDAGLVWPHLNVLLGVLVAAVVSFLVAALILHADKSTEDSLEAAQAATQAAKAQSKGQLVSTSVDAVVSTDSVEKII--FACDAGM-----GSSAMGASILRDKVKKAGLEIPVSN----------QAISNLLDTPKTLIVTQEELTPRAKDKSPSAIHVSVDNFLAS............................................................................ 458
8 -4.560IDP06189 sec-independent translocase [Helicobacter pylori J99] NP_223084 [Helicobacter pylori J99]  ali follow..  11  2......................................................................................................................................................................................................................................................................................................................................................................................................................FGMGFFEILVVLIVAIIF-LGPEKFPQ---------------------AVVDIVKFFRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYKRSLET.. 112
9 -4.540IDP00228 putative chloride channel protein YPO3388 [Yersinia pestis CO92]  ali follow..  12  1...........................................................MAAVVGVVTGLLGVAFDRGVDWVQQLAFIMSALLAMMGYFLVSRFAPEAGGSGIPEIEGAMEEMRPVRWWRVIPVKFIGGLGTLGAGMVLG---REG------------------------------------PMVQMGGNSGRM---------------VDIFRLRSPEARHSLLATGAAAGLSAA-----NAPLAGILFVIEEMRSQFRYSLVSIKAVFIGVITSTIVYRYFNGERAIIEVGKLLLGIIFGAVGVIFNLIFRTQDMFVRFHGGDWRKLVLIGGLLGGMCGLLALLHGNAVIAAAGNFSIGMLLFIFIARVITTLLCFGSGAPGGI-MLALGTILG---AFGLSCAHFFPQYGIEAGTFAIAGMG----ALFAASVRAPLTGIVLVL----MTDNYQLILPMIVTCLGATLIAQF........................................................ 401
10 -4.490IDP06143 gene: mogA; molybdenum cofactor biosynthesis protein MogA [Helicobacter pylori J99] NP_223453 [Helicobacter pylori J99]  ali follow..  12  1....................................................................................................................................................................................................................................................................................................................................................MQTIHIGVLSASDRAS-KAIQEVLSEYLLNPLEFHYEIVACDLVVTTGGTGP-EATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLI--------INLPGKPKSIRECLEAVFPAIPYCVDLILG.................................................................. 159

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 9 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.