|
current user: public |
|
Query: sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1, from H.sapiens |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATTPPATLPSSGP | Last |
1 | -39.500 | IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961] | ali follow.. | 12 | 2 | ..................LTQEHINIIKSTIPLLESAGPALTQHFYQRMFSHNPELKHIFN-----------MTHQKTGRQSVALFEAIAAYAKHIDNLAALTSAVERIAHKHT-SFNIQPEHYQIVGHHLLETLRELAPDAFTQPVEEAWTAAYFFLAQVFIDREGALYLERKQA.............. | 147 |
2 | -37.900 | IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL] | ali follow.. | 16 | 2 | ..................LTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFN-----------QTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHC-ALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQAWAKAYGVIADVFIQIEKEIYDQM................. | 144 |
3 | -36.300 | IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92] | ali follow.. | 14 | 2 | ..................LDTQTIAIVKSTIPLLAATGPKLTAHFYERMFKHHPELKNIFN-----------MSNQSSGDQREALFNAICAYATNIENLAALLPTVERIAQKHT-SLNIQPEHYPIVGEHLIATLDELFSP--GQAVLDAWAKAYGVLADVFIQRESQIYQQSETE.............. | 145 |
4 | -7.110 | IDP06380 gene: ORF46; ORF46 [Human herpesvirus 8] YP_001129398 [Human herpesvirus 8] | ali follow.. | 7 | 1 | MDAWLQQTVFRGTLSISQGVDDRDLLLAPKWISF--SLSSFLKQKLLSLLRVYPPQDKLMWWSHCCDPED-LGQDPYHKGQATGLAFSVDPQCQVPPSLRSIFRELEASVPNFSTPSHGCLDSWARQGVLLLNTVLTVEKGRAGSHEGLGWDWFTSFIISSISSKLEHC..................... | 182 |
5 | -5.970 | IDP90142 unknown [Monkeypox virus] MPXV_ZAI1979_005_188 [Monkeypox virus] | ali follow.. | 4 | 23 | ...................IDDVRQCLTEYWSSYAYRNRQCAGQLYGTLLSFKDDAESVFIDVRELVKNMPWDNVKDCTEIIRCYIPDEQKTIREISAIIGLCAYAATYWGGEDHPTSNSLNALFVMLGMLYTIIFWRMN.................................................. | 149 |
6 | -5.360 | IDP01602 gene: amn; AMP nucleosidase [Yersinia pestis CO92] YPO2288 [Yersinia pestis CO92] | ali follow.. | 9 | 1 | MNKLQDTGSLAVVEAIDKLEDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLS--------VRWDGKFSDHHRTRAYGR--FSRAGQYSTTITRPALLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPT-LAKIGDGITDGIET...................... | 166 |
7 | -5.070 | IDP02284 gene: grpE; heat shock protein GrpE [Coxiella burnetii RSA 493] CBU_1293 [Coxiella burnetii RSA 493] | ali follow.. | 12 | 28 | .EEGRGDGSQEMEPHREGLEFPSREKLEGQLTRMERKVDEY------QYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPASEDPQVKSMRD----------TLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQ-DTIIQVLQKGYQ....................... | 189 |
8 | -4.920 | IDP91394 hypothetical protein VV1_1133 [Vibrio vulnificus CMCP6] VV1_1133 [Vibrio vulnificus CMCP6] | ali follow.. | 11 | 110 | .........................ILDATWQEAR------------KMLNKSEWLKALPQLALHGDSASNYQLRRNQQQGNLCTLEIAAELVKQLGEAHNATSMTELL................................................................................. | 181 |
9 | -4.900 | IDP91562 gene: ECs0876; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34299 [Escherichia coli O157:H7 str. Sakai] | ali follow.. | 10 | 532 | .......MNDSDQWQQHTLKDKHYANLLTMLDLNDASESDKSKIFFC--------LSAVFANISHSNVFNGIPDASKLKRYAFALLAKAHSLDESMISNQTFNTYKTVLDFNNLSNEEANQLRISSLYRDMVRYAQYRFSKVLSEWTPDAW....................................... | 669 |
10 | -4.790 | IDP90208 gene: m139R; m139R MYXV_gp143 [Myxoma virus (strain Lausanne)] | ali follow.. | 11 | 50 | ...................SDDIVSILHNWYRGFIGLPNKYG-RVFKELKLFDIDAKTKYGDINTLFFMLNLNSDRCCRNNFVTLQKTIFKHTVTVYNCIEMIGLCALVAEKCLNWRIVVDEMFRFIDPDMLEKIRTVL------QERLAYEDL.................................... | 187 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98. |