current user: public
If you have questions about the server, please let us know.

Query: sp|A6NMK7|CPS4L_HUMAN Putative cleavage and polyadenylation specificity factor subunit 4-like protein OS=Homo sapiens GN=CPSF4L PE=2 SV=3, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .
# Score Template Links and tools%idFirst MQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAQKIREFKLLPGSKILast
1 -82.700sp|A6NMK7|CPS4L_HUMAN Putative cleavage and polyadenylation specificity factor subunit 4-like protein OS=Homo sapiens GN=CPSF4L PE=2 SV=3  ali  100  1MQEVIAGLERFTFAFEKDVEMQKGTGLLPFQGMDKSASAVCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAQKIREFKLLPGSKI 179
2 -75.100sp|O95639|CPSF4_HUMAN Cleavage and polyadenylation specificity factor subunit 4 OS=Homo sapiens GN=CPSF4 PE=1 SV=1  ali follow..  62  1MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQ. 178
3 -54.300sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens GN=ZC3H3 PE=1 SV=3  ali   27  41........GSCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRGRCNRGERCPYIHDPE-KVAVCTRFVRGTCKKTDGCPFSHHVSKEKMPVCSYFLK-GICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKH--TLLCPDFARGACPRGAQCQLLHRTQKRHSRRAAT. 209
4 -51.700sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3  ali   15  1.....DDYDEYSKELNQYRRSKDSRGRGLSRGRGRGSRGRGKGMGRGRGRGGSRGGMNK---GGMNDDEDFYDEDMGDGGGGSYRQQSDKKGKVICKYFVEGRCTWGDHCNFSHDELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLD. 179
5 -42.400sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens GN=ZC3H6 PE=2 SV=1  ali   14  50...............KGVQQGIEQRVKSFNVGRGRGLPKKIKRKERGRTNKGPNVFSVSDDFQ---EYNKPGKKWKVMTQEFINQHTVEHKGKQICKYFLEGRCIKGDQCKFDHDELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHDDLTKETKKLLD. 211
6 -39.500sp|Q9H0J9|PAR12_HUMAN Poly [ADP-ribose] polymerase 12 OS=Homo sapiens GN=PARP12 PE=1 SV=1  ali   23  69..................................ASPLRLCRAHQGSKPGCVGLCAQLH-------LCRFMVYGACKAGKNCRNSHSLTTEHPEICQHYNKGDGPHG-SCAFQKQ--CIKLHICQYFLQGECKFGTSCKRSHDGDQICLYHIRKSCSFQDKCHRVHFHLPYR....... 300
7 -39.000sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens GN=ZC3H8 PE=1 SV=2  ali follow..  17  119...............KDTPQAAKQKNKNLKAGHKNGKQKKMKRKWPGPGNKGSNALLRNSGSQEED-GKPKEKQ-QHLSQAFINQHTVERKGKQICKYFLERKCIKGDQCKFDHDEIEKKKEMCKFYVQGYCTRGENCLYLHN-EYPCKFYTGTKCYQGEYCKFSHAPLTPETQE.... 277
8 -38.900sp|Q96H79|ZCCHL_HUMAN Zinc finger CCCH-type antiviral protein 1-like OS=Homo sapiens GN=ZC3HAV1L PE=1 SV=2  ali follow..  20  72.....................VGGGGTSAWRVVAVSSVRLCARYQRGECQA---CDQLH-------FCRRHMLGKCPNRDTCTLSHDITPVNMQVLKSHGLFGLNENQRILLLQNDPCLLPEVCLLYNKGYCNLKDKCNKFH----VCKSFVKGEC-KLQTCKRSHQLIHAASLK.... 220
9 -35.200sp|O75152|ZC11A_HUMAN Zinc finger CCCH domain-containing protein 11A OS=Homo sapiens GN=ZC3H11A PE=1 SV=3  ali   19  2..................................PNQGEDCYFFFYSTCTKGDSCPFRHCEAGNETVCTLWQEGRCFRQV-CRFRHMEKKRSEIPCYWENQPTGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKASQLSVQQNKLSVQSNPSPQLRSVMKVESSEN... 146
10 -33.000sp|Q96K80|ZC3HA_HUMAN Zinc finger CCCH domain-containing protein 10 OS=Homo sapiens GN=ZC3H10 PE=1 SV=1  ali follow..  15  1MPDRDSYANGTG-GGGPGGGGSEEASGAGVGSGGASSDAICRDFLRNVCKRGKRCRYRHPDMNEFIFCHDFQNKECSRP-----------------------------NCRFIHGSKEDEDGYKKTVAAGLGLSPADLPNGKEEVPICRDFLKGDCQRGAKCKFRHLQRDFEFDARGG. 170
11 -32.500sp|Q5VZF2|MBNL2_HUMAN Muscleblind-like protein 2 OS=Homo sapiens GN=MBNL2 PE=1 SV=2  ali follow..  17  2.......................ALNVAPVRDTKWLTLEVCRQFQRGTCSRSDECKFAHPPKSRVIACFDSLKGRCSR-ENCKYLHLLRTDKLEVCREFQRGNCARGEDCRFAHPADSTMIDT-----------------SDNTVTVCMDYIKGRCMR-EKCKYFHPPAHLQAKIKAA. 247
12 -32.200sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3  ali   17  23LDALLQEIALSEPQLCEVLQVAGPDRVLETGGEAGITRSVVATTRARVCRRKYPCDNLH-------LCKLNLLGRCNERNLCKYSHEVLSEENFKKNHELSGLNKEELAVLLLQSDPFFMPEICKSYRQQICNQQPPCSRLH----ICDHFTRGNCRFP-NCLRSHNLMDRKVLA.... 200
13 -31.700sp|Q9NUK0|MBNL3_HUMAN Muscleblind-like protein 3 OS=Homo sapiens GN=MBNL3 PE=2 SV=2  ali follow..  17  3.......................AVNVALIRDTKWLTLEVCREFQRGTCSRADDCKFAHPPRVRVVACFDSLKGRCTR-ENCKYLHLMRSDKLEVCREFQRGNCTRGEDCRYAHPTDASMIEA-----------------SDNTVTICMDYIKGRCSR-EKCKYFHPPAHLQARLKAA. 245
14 -30.100sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1  ali   17  140.............................VAQKPEKLLERCKYWPA--CKNGDECAYHHPISPCKA-------PNCKFAEKCLFVH-------PNCKY---DAKCTKPDCPFTHVAPPAPPSSSQLCRYFPACKKMECPFYHPK--HCRF---NTQCTRPDCTFYHPTINVPPRHALK. 278
15 -29.900sp|Q9NR56|MBNL1_HUMAN Muscleblind-like protein 1 OS=Homo sapiens GN=MBNL1 PE=1 SV=2  ali follow..  19  2.......................AVSVTPIRDTKWLTLEVCREFQRGTCSRPDECKFAHPENGRVIACFDSLKGRCSR-ENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMRTDRLEVCREYQRGNCNRGEDCRFAHNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAKIKAA. 250
16 -27.800sp|Q9C0B0|UNK_HUMAN RING finger protein unkempt homolog OS=Homo sapiens GN=UNK PE=1 SV=2  ali   23  41....................................RTEQCPLFVQHKCHRPYTCFHWHFVNQRRR--YDEATGLCPEGDECPFLHRTTGDKTGICIHETDSKTKNGLHCAFAHGPHDLRSPVPCKKPPRLCRQGYACPYYHNSKSPCPNVKHGDCENGDACQYCHTRTEQQFHPE... 292
17 -27.200sp|Q9H0J9|PAR12_HUMAN Poly [ADP-ribose] polymerase 12 OS=Homo sapiens GN=PARP12 PE=1 SV=1  ali   15  4......................................EICQHYNKGSCAFQKQCIKLH-------ICQYFLQGECKFGTSCKRSHDFSNSENLPTIYRNAHDIKNKSSAPSRVPPLFVPQGTSERKDSSGSVSPNTLS-QEEGDQICLYHIRKSCSFQDKCHRVHFHLPYRWQFLDR. 156
18 -27.200sp|Q9H9P5|UNKL_HUMAN RING finger protein unkempt-like OS=Homo sapiens GN=UNKL PE=1 SV=3  ali   21  32....................................RTEQCPLFSQHKCARPFTCFHWHFLNQPDVYCSKYNEGVCPDGDECPYLHRTTGDKTGTCIHETDARVKNGLHCAFAHGPLDLRKTEQCPKPPRLCRQGYACPHYHNSRTPCPSVEPSRCDGGDGCQYCHSRTEQQFHPE... 284
19 -26.500sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens GN=ZC3H4 PE=1 SV=3  ali   25  200..............................GGMNKGGMNDDEDFYDEDMGDGGGGSYRSRDKKGKVICKYFVEGRCTWGDHCNFSHDIEPKKRELCKFYITGFCARAENCPYMHGDFPCK........................................................... 299
20 -26.400sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens GN=ZC3H3 PE=1 SV=3  ali   17  174.....................SDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIRQAREKRKEYCMYYNRGRCNRGERCPYIH--DPEKVAVCTRFVRGTCKKDGTCPFSHHVSKEKMP------------------------VCSYFLKGIC-SNSNCPYSHVYVS......... 300
21 -24.700sp|Q13434|MKRN4_HUMAN Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens GN=MKRN4P PE=5 SV=1  ali follow..  17  40...............APSPRAGGGVGGSDGSDGSGGRGDSGAYDGSGACGGSDACDGSGDSSGKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVCKYFQRGCCVYGDRCRCEHSKPLKQEEATATELTTKSSLAASSSLSSIKKQLCPYAAVGQCRYGENCVYLH............. 267
22 -23.400sp|Q9UGR2|Z3H7B_HUMAN Zinc finger CCCH domain-containing protein 7B OS=Homo sapiens GN=ZC3H7B PE=1 SV=1  ali   14  29....................................QFDVCRHEVRYGCLREDSCHFAHSFIELKVWLLQQYSGM-MGAPRTHGPSTFDLQMKFVCGQWRNGQVVEPDKDLKYCSAKARHCWTKERRVLLVMSKAKR-RNFPQQYDLCIHAQNGRCQYVGNCSFAHSPEERD....... 201
23 -23.300sp|Q9UHC7|MKRN1_HUMAN E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1 SV=3  ali follow..  23  51..............................SGGGWTKQVTCRYFMHGVCKEGDNCRYSHDDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQEEACPYAAVGECRYGENCVYLHGDSCDMLSNCNHTYCLKCIRKPECRKEAMSNKACRYFDEGRCPFGGNCFYKHAYPDGRREEPQR. 402
24 -23.300sp|Q13064|MKRN3_HUMAN Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens GN=MKRN3 PE=1 SV=1  ali follow..  16  76...............PASGGGAWPSPLPSRSSGIWTKQIICRYYIHGQCKEGENCRYSHDGRKMATEGGVSPPGASAGGGPSTAAHMAVGSGLRFCYYASRGVCFRGESCMYLHGDICDMCSNCNHSFCIRCIRRKSCPKEAMSNKACRYFARGNCPFGDTCFYKHEYPEGWGDEPPG. 432
25 -23.100sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3  ali   11  1......................................KSYKGEGRQICNQQPPCSRLH-------ICDHFTRGNCRFP-NCLRSHNLMDRKVLAIMREHGLNPDVVQNCNSKHMQKNPPGPRAPSSHRRNMAYRARSKSRDRFFQGSQEFASASASAERSCTPSPDQISHRASLEDA. 138
26 -22.500sp|Q8IWR0|Z3H7A_HUMAN Zinc finger CCCH domain-containing protein 7A OS=Homo sapiens GN=ZC3H7A PE=1 SV=1  ali   12  28.................................GQCQLDLCRHEVRYGCLREDECFYAHSLVELKV--EANVPGAQVLGNQIMPGFLNMKIKFVCAQCLRNGQVIEPDKNRKYCSAKARHSWTKDRRAMRVMSIERK-KQMPLQFDLCNHIASGKCQYVGNCSFAHSPEEREV...... 201
27 -22.000sp|Q9UGR2|Z3H7B_HUMAN Zinc finger CCCH domain-containing protein 7B OS=Homo sapiens GN=ZC3H7B PE=1 SV=1  ali   12  26...............SSEDQTWKRIRPRPTKTSFVGSYYLCKDMINKQCKYGDNCTFAYHQEEIDV--TEERKGTLNRDLLFDPLGGVKRGSLTIAKLLKEHQGIFTFLCEICFDSKPRIISKGTKDSPSVCSNLAAKHSEHFQFDVCRHEVRYGCLREDSCHFAHSFIELKVWLLQQ. 213
28 -21.900sp|Q8IWR0|Z3H7A_HUMAN Zinc finger CCCH domain-containing protein 7A OS=Homo sapiens GN=ZC3H7A PE=1 SV=1  ali   11  31...............NVEDKSWKKIRPRPTKTNYEGPYYICKDVAAEECRYSGHCTFAYCQEEIDV----WTLERKGAFSREAFFGGNGKINLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTACSHPVT-FHGQCQLDLCRHEVRYGCLREDECFYAHSLVELKVWIMQN. 215
29 -21.700sp|Q9H9P5|UNKL_HUMAN RING finger protein unkempt-like OS=Homo sapiens GN=UNKL PE=1 SV=3  ali   17  59....................................KTEQCPKP-PRLCRQGYACPHYHNSRDRSTPCPSVKHGDEWG---------------------EPSRCDGGDGCQYCHSRTEQQFHP-ESTKCNDMRQT------------------GYCPRGPFCAFAHVEKSLGMVNEWG. 169
30 -21.300sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens GN=MKRN2 PE=1 SV=2  ali follow..  22  2..................................STKQITCRYFMHGVCREGSQCLFSHDNSKPSTICKYYQKGYCAYGTRCRYDHTRPSAAAQLCPYAAAGECRFGDACVYLHGEVCEILSNCNHTYCLSCIRQKSCPKQGMGKKACKYFEKGTCPFGSKCLYRHAYPDGRLAEPEK. 359
31 -20.900sp|Q9C0B0|UNK_HUMAN RING finger protein unkempt homolog OS=Homo sapiens GN=UNK PE=1 SV=2  ali   22  67....................................KTEPCKKP-PRLCRQGYACPYYHNSKDRRRSPRKH------------------KYRSSPCPNVKHGD---------------------EWGDPGKCENGDACQYCHTKSTKCNDMQQGSCPRGPFCAFAHVEQPPLSDDLQP. 180
32 -20.900sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens GN=ZC3H3 PE=1 SV=3  ali   17  1...................................RKAEVCSDFLKGYCPLGAKCKKKHT-----LLCPDFARGACPRGAQCQLLHRTQKRHS--------------RRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSS. 125
33 -20.300sp|Q07352|TISB_HUMAN Zinc finger protein 36, C3H1 type-like 1 OS=Homo sapiens GN=ZFP36L1 PE=1 SV=1  ali follow..  18  80.............................................SSRDSRFRDRSFSEGGERLLP----------TQKQPGGGQVNSSRYKTELCRPFEENGCKYGDKCQFAH---------------GIHELRSLTRHPKYKTELCRTFHTGFCPYGPRCHFIHNAEERRALAGAR. 189
34 -19.800sp|Q8IWR0|Z3H7A_HUMAN Zinc finger CCCH domain-containing protein 7A OS=Homo sapiens GN=ZC3H7A PE=1 SV=1  ali   16  7......................MNIRPLPTKKQMPLQFDLCNHIASGKCQYVGNCSFAHSPEEREVWTYMKENGIQDMEQFYELWLKSQKNEKSEDIASQSNKENGKQIHMPTDYAEVTVDFHCWMCGKNCNSEKQQHRFPTGYFSICDRYMNGTCPEGNSCKFAHGNAELHE...... 182
35 -19.600sp|P26651|TTP_HUMAN Tristetraprolin OS=Homo sapiens GN=ZFP36 PE=1 SV=1  ali follow..  16  49...............GVTSRLPGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPSPTSPTATSTTPSRY--------------------KTELCRTFSESGCRYGAKCQFAH---------------GLGELRQANRHPKYKTELCHKFYLGRCPYGSRCHFIHNPSEDLAAPGHP. 178
36 -19.600sp|Q8WU68|U2AF4_HUMAN Splicing factor U2AF 26 kDa subunit OS=Homo sapiens GN=U2AF1L4 PE=1 SV=2  ali follow..  13  11.................................TEKDKVNCSFYFKGVCRHGDRCSRLHNKPTFSQT-EEVFTELQEKYGEIEEMNVCDNLGD------------HLVGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQ.. 184
37 -19.200sp|Q9UGR2|Z3H7B_HUMAN Zinc finger CCCH domain-containing protein 7B OS=Homo sapiens GN=ZC3H7B PE=1 SV=1  ali   12  1...............SKAKRKWVSVRPLPSIRNFPQQYDLCIHAQNGRCQYVGNCSFAHSPEERDMWTFMKENKI-SSREGEKQIQMPTDYADIMMGYHCWLCGKNSNSKKQWQQHIQSEKHKEKVFTSDSDASGWAFRFPMGEFRLCDRLQKKACPDGDKCRCAHGQEELNE...... 184
38 -19.100sp|Q9NXH9|TRM1_HUMAN(removed signalp:1-21) N(2),N(2)-dimethylguanosine tRNA methyltransferase OS=Homo sapiens GN=TRMT1 PE=1 SV=1  ali   18  110...............RLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSHSPPTPR.................................................................................................................. 159
39 -18.500sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens GN=ZC3H6 PE=2 SV=1  ali   27  1.....................................................................................................................EKRKEICKFYLQGYCTKGENCIYMH-NEFPCKFYHSGKCYQGDNCKFSHDDLTKETKK.... 58
40 -17.200sp|Q96G46|DUS3L_HUMAN tRNA-dihydrouridine synthase 3-like OS=Homo sapiens GN=DUS3L PE=1 SV=2  ali   18  99...............TQKRARGQNKGRPHVKPTNYDKNRLCPSLIQAKCFFGDRCRFLHDPADLGPRCVLFTFGRCPYGVTCRFAGAHLRPE....................................................................................... 187
41 -16.900sp|O15504|NUPL2_HUMAN Nucleoporin-like protein 2 OS=Homo sapiens GN=NUPL2 PE=1 SV=1  ali follow..  33  1.....................................MAICQFFLQGRCRFGDRCWNEHPGARG................................................................................................................... 27
42 -16.300sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2 PE=1 SV=3  ali follow..  24  134...............LLHLQQQQKGGGGSQINSTRYKTELCRPFEEGTCKYGEKCQFAHGFHELRSLTRH----------------------------------------KY-------------------------------KTELCRTFHTGFCPYGPRCHFIHNADERRPAPSGG. 228
43 -16.100sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57 PE=1 SV=2  ali   14  5.PSLVPDLDPLEYAGLASVEPYVPEFTVSPFAVQKLSR-----FNTERCQAVRMCDGDVGASLEHLLTQCFSETFGERMKISEAVNQISLDECME-EAFALKSICGEKFIERIQNRVWTIGLELEYLTSRFRKSKPKESTKNNSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRIE. 185
44 -15.100sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1  ali follow..  19  40QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADP--KSVVCAFFKQGQCTKGDKCKFSHDLTLERKCE-SVYIDARDEELEKDTMDNWDEKKLEEVVNK------KHGEAEKKKPKTQIVCKHFLEAVCPGGDICMYRHALPPGFVLKKDK. 221
45 -14.900sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens GN=ZC3H6 PE=2 SV=1  ali   16  249.....................................................................................................................EYNKPGKKWKVMTQEFINQHTVEHK-GKQICKYFLEGRCIKGDQCKFDHD............ 297
46 -14.900sp|Q01081|U2AF1_HUMAN Splicing factor U2AF 35 kDa subunit OS=Homo sapiens GN=U2AF1 PE=1 SV=3  ali follow..  14  11.................................TEKDKVNCSFYFKGACRHGDRCSRLHNKPTFSQTSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKY--------YVKFRREEDAEKAVIDLNNRWFNGQPIHAELSREACCRQYEMGECTRGGFCNFMHLKPISRELRRE.. 184
47 -13.900sp|Q86VM9|ZCH18_HUMAN Zinc finger CCCH domain-containing protein 18 OS=Homo sapiens GN=ZC3H18 PE=1 SV=2  ali   24  49...............EIDDDDLEEGEVKDPSDRKVRPRPTCRFFMKGNCTWGMNCRFIHPGVNDK.................................................................................................................. 98
48 -13.700sp|Q5TC82|RC3H1_HUMAN Roquin OS=Homo sapiens GN=RC3H1 PE=1 SV=1  ali   14  17MQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKY---------------------------------------------KTYMCRDMQRGGCPRGASCTFAHSQEELEKFRKMN. 150
49 -13.700sp|P79522|PRR3_HUMAN Proline-rich protein 3 OS=Homo sapiens GN=PRR3 PE=2 SV=2  ali follow..  50  154.................................DKSDRPVCRHFAKGHCRYEDLCAFYH........................................................................................................................ 180
50 -12.300sp|Q8IYL2|TRM44_HUMAN Probable tRNA (uracil-O(2)-)-methyltransferase OS=Homo sapiens GN=C4orf23 PE=2 SV=2  ali   22  94...............EETLWKTKQPEAKQRLLSEACKTRLCWFFMHGCALSTDCCPFAHGPAE.................................................................................................................... 144
51 -12.100sp|Q04759|KPCT_HUMAN Protein kinase C theta type OS=Homo sapiens GN=PRKCQ PE=1 SV=3  ali   16  150..............KQAKVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRAIHKK------CIDKVIAKCTGSAINSRETMFHKERFKI-HRFKVYNYKSPTFCEH-----------CGTLLWGLARQGLKCDA-------CGMNVHHRCQT-NLCGINQKLMAEALAMIEST 298
52 -12.100sp|Q9HBD1|RC3H2_HUMAN RING finger and CCCH-type zinc finger domain-containing protein 2 OS=Homo sapiens GN=RC3H2 PE=1 SV=2  ali   11  14MQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDKGHETPQPQPNSKYKTSMCRDLRQQGCPRGTNCTFAHSQEELEKYRLR-------KKINATVRTFPLLNKVGVNNTVTTTAGNVISVIGSTETTGKIVPST. 193
53 -11.600sp|O95428|PPN_HUMAN(removed signalp:1-18) Papilin OS=Homo sapiens GN=PAPLN PE=2 SV=4  ali   16  8....................................GPHDCRHSPHGCCPDGTASLGPQWQGCPGAPCQQSRYGCCPDRVS-THQPQAQQNEPSECRGSQFGCCYDNVATA-GQPSHAYPVRCLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANCM................ 183
54 -11.500sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2  ali   18  150...............QAKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQIHKK------CIDKIIGRCTGTAANSRDTIFQKERFNI-HRFKVHNYMSPTFCDH-----------CGSLLWGLVKQGLKCED-------CGMNVHHKCRE-NLCGINQKLLAEALNQVTQ. 296
55 -11.400sp|Q5T8P6|RBM26_HUMAN RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3  ali   23  119...............ESWSEFHEDQVDHNSYVRPPMPKKRCRDYEKGFCMRGDMCPFDHGSDPVVV................................................................................................................. 170
56 -11.300sp|Q7Z2W4|ZCCHV_HUMAN Zinc finger CCCH-type antiviral protein 1 OS=Homo sapiens GN=ZC3HAV1 PE=1 SV=3  ali   13  38...............LVNDSLSDVTSTTSSRVDDHDSEEICLDHLCKGCPLNGSCSKVH........................................................................................................................ 81
57 -10.900sp|Q9P2N5|RBM27_HUMAN RNA-binding protein 27 OS=Homo sapiens GN=RBM27 PE=1 SV=2  ali   21  104...............ESWSNYYNNHSSSNSFGRNLPPKRRCRDYERGFCVLGDLCQFDHGNDPLVV................................................................................................................. 155
58 -10.900sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3  ali   13  97.HSPLLVFKSYRFSPYYRTKEKLPLSSVSYSNMIEPDQCFCRFDLTGTC-NDDDCQWQHIQD..................................................................................................................... 156
59 -10.900sp|Q7Z3E1|PARPT_HUMAN TCDD-inducible poly [ADP-ribose] polymerase OS=Homo sapiens GN=TIPARP PE=1 SV=1  ali   20  224.....................FELVNQLQYHTHQENGIEICMDFLQGTCIYGRDCLKHHTV...................................................................................................................... 263
60 -10.800sp|Q04756|HGFA_HUMAN(removed signalp:1-35) Hepatocyte growth factor activator OS=Homo sapiens GN=HGFAC PE=1 SV=1  ali   16  123..................................PAALDPC---ASGPCLNGGSCSNTQDPQSYHCSCPRAFTGDCGTEKCFDETRYEYLEGGDRWARVRQGHVEQ---CECFGGRTWCEGTRHTACLSSPCLNGGTCHIVATGTTVC------ACPAGRLCNIE.............. 246
61 -10.700sp|Q02156|KPCE_HUMAN Protein kinase C epsilon type OS=Homo sapiens GN=PRKCE PE=1 SV=1  ali   16  161...............RRRVHQVNGHKFMATYLRQPTYCSHCRDFIWGV-KQGYQCQVVHKR------CHELIITKCAGLKKQETPDQVGSQRFSV-HKFGIHNYKVPTFCDH-----------CGSLLWGLLRQGLQCKV-HRR---CETNVAPNCGVDAR.................. 297
62 -10.700sp|Q7Z3E1|PARPT_HUMAN TCDD-inducible poly [ADP-ribose] polymerase OS=Homo sapiens GN=TIPARP PE=1 SV=1  ali   20  74.....................FELVNQLQYHTHQENGIEICMDFLQGTCIYGRDCLKHHTV...................................................................................................................... 113
63 -10.600sp|P24723|KPCL_HUMAN Protein kinase C eta type OS=Homo sapiens GN=PRKCH PE=1 SV=4  ali   15  163...............RRRVHQINGHKFMATYLRQPTYCSHCREFIWG--KQGYQCQ----------VCTCVVHKRCHHLTACTCQNNINKVDSKI-HKFSIHNYKVPTFCDH-----------CGSLLWGIMRQGLQCKI-HIR---CQANVAPNCGVNA................... 299
64 -10.400sp|Q5T1H1|EYS_HUMAN(removed signalp:1-21) Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=4  ali   17  12.SMFLGHIPANVQIHKKAGPVYGFRGCILDLQVNNKEFFIIDEARHGK--NIENC--------HVPWCA---HHLCRNNGTCI---SDNENLFCECPRLYSGKLCQFASC-----------------ENNPCGNGATCVPKSGTDIVC------LCPSGPLCT................ 137
65 -10.400sp|P42694|HELZ_HUMAN Probable helicase with zinc finger domain OS=Homo sapiens GN=HELZ PE=1 SV=2  ali   26  27.................................SSEEYTLCKRFLEGICRYGAQCTSAHSQEE.................................................................................................................... 57
66 -10.300sp|Q9NYQ7|CELR3_HUMAN(removed signalp:1-31) Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens GN=CELSR3 PE=1 SV=2  ali   22  191...............................................RCPTGDFC------ETELDLC---YSNPCRNGGAC-----ARREGGYTCV--------TGEDC-----ELDTEAGRC---VPGVCRNGGTCTDAPNGGFRCQ--PAGGAFEGPRCEVA.............. 285
67 -10.200sp|O00548|DLL1_HUMAN(removed signalp:1-21) Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=2 SV=2  ali   18  183........................................CGERGEKVCNPGWKGPYCTEPICLPGCDEQ--HGFCDKPGECKCRVGWQGRYCDECIRYLHGTCQQPWQCNWGGLFCNQDLNYCT--HHKPCKNGATCTNTGQGSYTC------SCRPG.................... 298
68 -10.200sp|Q9BZL6|KPCD2_HUMAN Serine/threonine-protein kinase D2 OS=Homo sapiens GN=PRKD2 PE=1 SV=2  ali   13  5........................................CGEMLFGLVRQGLKCD-YHKR------CAFSIPNNCSGARKRRLSSTSLASGHSVRLTFLIHSYTRPTVCQA-----------CKKLLKGLFRQGLQCK--------CKFNCHKRCATPNDCLGEALINGDVPMEEAT. 180
69 -10.200sp|O94806|KPCD3_HUMAN Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1  ali   14  21........................................CGEMLWGLVRQGLKCE-YHKR------CAFKIPNNCSGVRKRRLSNKMVMCRVKVPHTFAVHSYTRPTICQY-----------CKRLLKGLFRQGMQCK--------CKFNCHKRCASKRDCLGEVTFNGEPSSLGTDT 188
70 -10.100sp|P52824|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens GN=DGKQ PE=1 SV=2  ali   19  1.......................................VCELHLHPDCVP-SDCRHQDGHQDHDTHHHHWREGNLPSGARCEV-----------CRKTCGSSVLAGVRCEW-------------------------CGVQHSL---CSAALAPECGFGR................... 88
71 -10.100sp|P01133|EGF_HUMAN(removed signalp:1-21) Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2  ali   18  1...............................................SCGENASC----TNTEGGYTCM------CAGR----------SEPGLICPDSTPPPHLREDDHH---YSVRNSDSECPLSHDGYCLHDGVCMYIEADKYAC------NCVVGERCQYR.............. 94
72 -10.100sp|Q8N1G1|REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo sapiens GN=REXO1 PE=1 SV=3  ali   25  4...............................................................................................................................STGF------------RAIDCPYWSGGPCRR-PYCHFRHRGARGSGAPGDGG 46
73 -10.100sp|Q02156|KPCE_HUMAN Protein kinase C epsilon type OS=Homo sapiens GN=PRKCE PE=1 SV=1  ali   15  10..............VRRRVHQVNGHKFMATYLRQPTYCSHCRDFIWG--KQGYQC----------QVCTCVVHKRCHELTKCAGLKKQETPDQVG-HKFGIHNYKVPTFCDH-----------CGSLLWGLLRQGLQCK-------VCKMNVHRRCET-PNCGVDARGIAKVLADLGVT 159
74 -10.100sp|Q9UGR2|Z3H7B_HUMAN Zinc finger CCCH domain-containing protein 7B OS=Homo sapiens GN=ZC3H7B PE=1 SV=1  ali   10  171..........LGRLRSSEDQTWKRIRPRPTKTSFVGSYYLCKDMINKQCKYGDNCTFAYHQEEIDV--TEERKGTLNRDLLFDPLGGVKRGSLTIAKLLKEHQGIFTFLCEICFDSKPRIISKGTKDSPSVCSN----AAKHS.................................... 300
75 -9.900sp|Q86XP1|DGKH_HUMAN Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH PE=1 SV=1  ali   15  190......................................NVCRESLSGVTSHGLSCEVAHKR------CAVRATNNCKWTTLASIGKDIIEDEDGV-HQWLEGNLPVSAKCAV-----------CDKTCGSV-LQDWKCLW-------CKTMVHTACKDHPICPL............... 300
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.