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Query: sp|A8MYX2|F25DE_HUMAN Protein FAM25D/E OS=Homo sapiens GN=FAM25D PE=2 SV=2, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSQSVLAGGGIPEPHLGCPGTYRSIVRINGSALSPHPGLRGHEPALSPLPGLGGHWACSEPSPWTQEGSGPALSPHPGLWGQWACSEPSSWTRGQRACSEPSPWTCLLCSVHAMEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEVTETVTNTVTNAITHAAESLGKLGQLast
1 -124.000sp|A8MYX2|F25DE_HUMAN Protein FAM25D/E OS=Homo sapiens GN=FAM25D PE=2 SV=2  ali  100  1MSQSVLAGGGIPEPHLGCPGTYRSIVRINGSALSPHPGLRGHEPALSPLPGLGGHWACSEPSPWTQEGSGPALSPHPGLWGQWACSEPSSWTRGQRACSEPSPWTCLLCSVHAMEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEVTETVTNTVTNAITHAAESLGKLGQ 175
2 -39.100sp|Q5VTM1|FAM25_HUMAN Protein FAM25 OS=Homo sapiens GN=FAM25A PE=2 SV=2  ali follow..  92  24.............................................................................................................AIHAVEEVVKEVVGHAKETGEKAIAEAIKKAQESGDKKMKEITETVTNTVTNAITHAAESLDKLGQ 89
3 -8.510sp|Q15847|APM2_HUMAN Adipose most abundant gene transcript 2 protein OS=Homo sapiens GN=APM2 PE=1 SV=1  ali follow..  31  20.............................................................................................................AVSAAGAAAQQVVDQATEAGQKAMDQLAKTTQETIDKTANQASDTFSG.................. 67
4 -7.090sp|O75054|IGSF3_HUMAN(removed signalp:1-19) Immunoglobulin superfamily member 3 OS=Homo sapiens GN=IGSF3 PE=1 SV=3  ali   30  204.DALFYFVFFYPFPIFGILIITILLVRFNSDGKNGVPLLWIKEPHLNYSP------TCLEP---------PVLSIHPG................................................................................................. 272
5 -6.620sp|Q6ZT12|UBR3_HUMAN E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens GN=UBR3 PE=2 SV=2  ali   13  2.................................GDH---TGHDFNMFRSQA-GGACDCGDSNVMRESGF---------------CKR-HQIKSSSNIPCVPKDLLMMSEFV--LPRFIFCLIQYLREGYNEPAADGPSEKDLNKVLQLLEPQISFLEDLTK.............. 107
6 -6.480sp|P37840|SYUA_HUMAN Alpha-synuclein OS=Homo sapiens GN=SNCA PE=1 SV=1  ali follow..  22  1...........................................................................................................MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGG 68
7 -6.190sp|Q05209|PTN12_HUMAN Tyrosine-protein phosphatase non-receptor type 12 OS=Homo sapiens GN=PTPN12 PE=1 SV=3  ali   10  89...........................INANFIKGVYGPKAYVATQGPLANVIDFWRM-----WEYNVVIIVMACREFEMGRKKCER---WPLYGEDPITFAPFKISCEDEQARTDYFIRTLLLEFQNESRRLYQDVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTG. 239
8 -6.150sp|Q9Y2R2|PTN22_HUMAN Tyrosine-protein phosphatase non-receptor type 22 OS=Homo sapiens GN=PTPN22 PE=1 SV=2  ali   12  85...........................INANFIKGVYGPKAYIATQGPLSTLLDFWRM-----WEYSVLIIVMACMEYEMGKKKCE--RYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSETRTIYQDVPSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTG. 235
9 -6.090sp|Q13591|SEM5A_HUMAN(removed signalp:1-22) Semaphorin-5A OS=Homo sapiens GN=SEMA5A PE=1 SV=3  ali   21  2..............................................NPTPRHGGR-VCVGQNREERYCNEHLLCPPHMFWTGWGCTAGGGIQARRRICENGPD........................................................................ 63
10 -6.070sp|O00411|RPOM_HUMAN DNA-directed RNA polymerase, mitochondrial OS=Homo sapiens GN=POLRMT PE=1 SV=2  ali   16  114....................AEEVMDDILDSADQPLTGRKWWMGAEEPWQTLA---CCMEVANAVRASDPAAYVSHLPVHQDGSCNGLQHYAALGR--DSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQRGMRVAQVLEGFITRKVVKQTVMTVVYGVTRYG........ 255
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.