current user: public

If you have questions about the server, please let us know.

Query: sp|C9JUS6|ADM5_HUMAN(removed signalp:1-18) Putative adrenomedullin-5-like protein OS=Homo sapiens GN=ADM5 PE=2 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .
# Score Template Links and tools%idFirst DLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLHQGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGFSLPICMLELLLHISSPLTPAPETVFPSPSPGCDLast
1 -85.600sp|C9JUS6|ADM5_HUMAN(removed signalp:1-18) Putative adrenomedullin-5-like protein OS=Homo sapiens GN=ADM5 PE=2 SV=1  ali  100  1DLDTAARRGQHQVPQHRGHVCYLGVCRTHRLAEIIYWIRCLHQGALGEGQPRAPGPLQLWAPPVARGGSPARFPGFRPAARGLAQCPARWVTSGTARPLLGFSLPICMLELLLHISSPLTPAPETVFPSPSPGCD 135
2 -18.700sp|P41440|S19A1_HUMAN Folate transporter 1 OS=Homo sapiens GN=SLC19A1 PE=1 SV=3  ali follow..  13  484.........................................LSVQDKGLGGLQPAQSPPLSPEDSLGAVGPASLEQRQSDPYLAQAPAPQAAEFSPVTTPSPCTLCSAQASGPEAADETCPQLAVHPPGVSK... 575
3 -17.000sp|P35318|ADML_HUMAN(removed signalp:1-21) ADM OS=Homo sapiens GN=ADM PE=1 SV=1  ali follow..  16  75......RQSMNNFQGLRSFGCRFGTCTVQKLAHQIYQFTDKDKDNVAPRSKISPQGYGRRRRRSLPEAGPGRTLVSSKPQAHGAPAPPSGSAP.......................................... 161
4 -14.200sp|Q7Z4H4|ADM2_HUMAN(removed signalp:1-24) ADM2 OS=Homo sapiens GN=ADM2 PE=2 SV=1  ali follow..  15  72......SGPRRTQAQLLRVGCVLGTCQVQNLSHRLWQL--MGPAGRQDSAPVDPSSPHSYG.......................................................................... 124
5 -13.400sp|Q8TDT2|GP152_HUMAN Probable G-protein coupled receptor 152 OS=Homo sapiens GN=GPR152 PE=2 SV=1  ali follow..  14  378.........................................PTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAASSVPSP---CDEASPTPSSHPTPGALEDPATPPASEGESPSSTPPEAAPGAG 468
6 -10.700sp|P10997|IAPP_HUMAN(removed signalp:1-22) Islet amyloid polypeptide OS=Homo sapiens GN=IAPP PE=1 SV=1  ali follow..  25  2.........PIESHQVEKRKCNTATCATQRLANFLV................................................................................................... 28
7 -10.500sp|Q13508|NAR3_HUMAN(removed signalp:1-26) Ecto-ADP-ribosyltransferase 3 OS=Homo sapiens GN=ART3 PE=1 SV=2  ali follow..  261.........................................QKLEDHSEKNWKLEDHGEKNQKLEDHGVKILEPTQIPGMKIPEPFP-----LPEDKSQGNINNPTPGPVPVPGPKSHPSASSGKL-LLPQFGM. 347
8 -9.890sp|Q6H9L7|ISM2_HUMAN(removed signalp:1-26) Isthmin-2 OS=Homo sapiens GN=ISM2 PE=2 SV=1  ali follow..  11  1..............................LP--------VKKPRLRGPRPGSLTRLAEVSASPDPRPLKEEEEAPLLPRTHLQAEPHQHGCWTVTEPAA--PPRTPEVTPLRLELQKLPGLANTTLSTPNPDTQ 102
9 -9.650sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2  ali   223.......................................................IPNATGTGTFSPGASPGSEARTTGDISVEKLNLGTDSDSSPQKSSRDPPSSPSSLSSPIQESTAPELPSETQETPGPA.. 300
10 -9.130sp|O75533|SF3B1_HUMAN Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3  ali   10  204.........................................ADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAAT------PGRGDTPGHATPGHGGATSTPKTE 300
11 -9.060sp|Q8N5U0|CK042_HUMAN Uncharacterized protein C11orf42 OS=Homo sapiens GN=C11orf42 PE=2 SV=2  ali follow..  10  241.........................................APADTTEAADVPPPVPAPPTPPPQEGPEDKPTRFSYKGRNPFWRGPQILSENWLFSPRSPPPGAQGGGPRDPDGHSMSLPLLQGLSSEFD.... 330

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.