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Query: sp|O95684|FR1OP_HUMAN FGFR1 oncogene partner OS=Homo sapiens GN=FGFR1OP PE=1 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVALast
1 -77.900sp|O95684|FR1OP_HUMAN FGFR1 oncogene partner OS=Homo sapiens GN=FGFR1OP PE=1 SV=1  ali  100  1MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKSPEGKTSAQTTPSKIPRYKGQGKKKTSGQKAGDKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEIEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA 399
2 -42.000sp|Q96NB1|CP063_HUMAN LisH domain-containing protein C16orf63 OS=Homo sapiens GN=C16orf63 PE=2 SV=1  ali follow..  21  1.........MATVAELKAVLKDTLEKKGVLGHLKARIRAEVFNALDDDREPRPS------------LSHENLLINELIREYLEFNKYKYTASVLIAESGQPVVPLDRQFLIHELNAFEESKDNTIPLLYGILAHFLRGTKDGIQNAFLKGPSLQPSDPSLGRQPSRRKPMDDHLRKEEQKSTNIEDLHVSQA............................................................................................................................................................................................................... 171
3 -33.400sp|O75665|OFD1_HUMAN Oral-facial-digital syndrome 1 protein OS=Homo sapiens GN=OFD1 PE=1 SV=1  ali   14  1MSNMFTVADVLSQDELRKKLYQTFKDRGILDTLKTQLRNQLIHELMHPV---LSGELQPRSISVEGSSLLIGASNSLVADHLQRCGYEYSLSVFFPESGLAKEKVFTMQDLLQL-------NPTSSLYKSLVSGSDKENQKAKESCNMETQTSSTFNRDSLAEKLQLIDDQFADAYPQRIKFESLEIKLNEYKREIEEQLRAEMCQKLKFFKDTEIAKIKMEAKKKYEKELTMFQNDFEKACQAKSEALVLREKSTLERIHKHQEIETKEIYAQRQL.......................................................................................................................... 288
4 -12.200sp|Q4G0A6|F188B_HUMAN Protein FAM188B OS=Homo sapiens GN=FAM188B PE=2 SV=2  ali   30  9........................................................................VAASLVREFLSRKGLKKTCVTMDQE-RSDLSINNRNDLRKVLHLEFENKAKENPLSLELI........................................................................................................................................................................................................................................................................... 74
5 -8.230sp|P82979|SARNP_HUMAN SAP domain-containing ribonucleoprotein OS=Homo sapiens GN=SARNP PE=1 SV=3  ali follow..  26  1MATETVELHKLKLAELKQECLARLETKGI----KQDLIHRLQAYLEEHA.............................................................................................................................................................................................................................................................................................................................................................. 46
6 -7.460sp|O15553|MEFV_HUMAN Pyrin OS=Homo sapiens GN=MEFV PE=1 SV=1  ali   21  1MAKT-----------PSDHLLSTLEEPYDFEKFKFKLQNTSVQQIQRARPVK--------------------MATLLVTYYGEEYAVQLTLQVLRA--------INQRLLAEELH............................................................................................................................................................................................................................................................................................ 87
7 -7.050sp|Q1XH10|DLN1_HUMAN Protein DLN-1 OS=Homo sapiens GN=C10orf140 PE=2 SV=1  ali   19  149..............................................................................................................................................................................................................................................................................................................................SSDSESSSYSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEEEEEEEEEEGGSGASDSSEVSSEEEDSSTESDSSSGSSQVS 229
8 -7.010sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing protein KIAA1468 OS=Homo sapiens GN=KIAA1468 PE=1 SV=2  ali   21  43..SDDGNRETDEEFELR-------KAKETIQALRANLTKAA----HEVPLQERKNYKSSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTSITFSDEND............................................................................................................................................................................................................................................................................................................ 134
9 -6.790sp|Q9NVE4|CCD87_HUMAN Coiled-coil domain-containing protein 87 OS=Homo sapiens GN=CCDC87 PE=2 SV=2  ali   12  45..LQSFPLAKLTVASLCSQVAKLLAGSGIAAGVRLRLIKVILDELREPPAELSLSHKNNQKLRKRLEAYVLLSSEQLFLRYLHLLVMSTPRGVFTESATLTR-------LAASLARDCTLFLTSPNVYRGLLADFQALLRAEQASGDVDK......................................................................................................................................................................................................................................................... 194
10 -6.760sp|Q9BWG4|SSBP4_HUMAN Single-stranded DNA-binding protein 4 OS=Homo sapiens GN=SSBP4 PE=1 SV=1  ali follow..  3.......................................................AKGGKGSAVPSDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKNIT----------------GEPPGFLHSLYCAAPDRREACEHSGEAKAFQDYSAAAA................................................................................................................................................................................................................................................ 98

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.