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Query: sp|Q5D0E6|DALD3_HUMAN DALR anticodon-binding domain-containing protein 3 OS=Homo sapiens GN=DALRD3 PE=2 SV=2, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATRRLGVGETLGALNAALGPGGPVWIKETRTRHLRSRDFLAPHRALQARFDDGQVPEHLLHALACLQGPGVAPVLRCAPTPAGLSLQLQRSAVFERVLSAVAAYATPASPASLGQRVLLHCPALRSSPCALRLSQLRTVLVADHLARALRAHGVCVRLVPAVRDPHMLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGRTAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEEEFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALKHGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLAMLGLPPLSHILast
1 -171.000sp|Q5D0E6|DALD3_HUMAN DALR anticodon-binding domain-containing protein 3 OS=Homo sapiens GN=DALRD3 PE=2 SV=2  ali  100  1MATRRLGVGETLGALNAALGPGGPVWIKETRTRHLRSRDFLAPHRALQARFDDGQVPEHLLHALACLQGPGVAPVLRCAPTPAGLSLQLQRSAVFERVLSAVAAYATPASPASLGQRVLLHCPALRSSPCALRLSQLRTVLVADHLARALRAHGVCVRLVPAVRDPHMLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGRTAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEEEFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALKHGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLAMLGLPPLSHI 543
2 -95.600sp|Q5T160|SYRM_HUMAN Probable arginyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=RARS2 PE=1 SV=1  ali follow..  13  2ACGFRRAIACQLSRVLNLPPENITSISAVPISQKEEVADFQLS-VDSLLEKDNDHSRPVQAKRLAEKLRC-DTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSPQKKIVVEFSSPNVAK-KFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQ-QVNKEAADDKSVAKAAQEFFQRLELGDVQALSLWQDLSIEEYIRVYKLGVYFDEYSGESFYREKSQEVLTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAERCQHVPFGVVGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTT--KELKNPQETAERVGLAALIIQDFKGLLLSDYKFSWDRV--FQSRGDTGVFLQYTHARLHSLEETFGCG----------YLNDFNTACLQEPQS-VSILQHLLRFDEVLYKSSQ----------DFQPRHIVSYLLTLSHLAAVAHKTLQIKDSPPE----VAGARLHLFKAVRSVLANGMKLLGITPVCRM 578
3 -64.400sp|P54136|SYRC_HUMAN Arginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2  ali   16  1.............................................................................................................................................................................................................................................................................................................................KFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDK--MLDDRGNTAAYLLYAFTRIRSIARLANIDEEM-----LQKAARETKILLDHEKEWK-LGRCILRFPEILQKILD----------DLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 210
4 -48.900sp|P54136|SYRC_HUMAN Arginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2  ali   13  42.........................................................................................................................................................................................................................MNDIVKEFEDRGFVQVDDGRKIVFPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGDPKVTRVFHAGFGVVKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDK--MLDDRGNTAAYLLYAFTRIRSIARLANIDEEM-----LQKAARETKILLDHEKEWK-LGRCILRFPEILQKILD----------DLFLHTLCDY.......................................................... 300
5 -38.300sp|P54136|SYRC_HUMAN Arginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2  ali   9  1..........................................................................IEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAK-EMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQ-ESKKRFDTEEEFKKRAYQCVVLLQGKNPDITKAWKDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGDPKVTRVFHAGFGVVLGEDKK............................................................................................................................................................................................................................ 300
6 -33.600sp|P54136|SYRC_HUMAN Arginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2  ali   11  73MINIISRLQEVFGHAIKAAYPDENPPLLVTPSQQAKFGDYQC-NSAMGISKEQKVNPREIAENITKHLPD-NECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQLPALGENKKVIVDFSSPNIAK-EMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQ............................................................................................................................................................................................................................................................................................................................................................................. 253
7 -9.100sp|Q96GW9|SYMM_HUMAN(removed signalp:1-15) Methionyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=MARS2 PE=1 SV=2  ali follow..  12  1.........................................................................................SRLSLLEDFGPRYYSSGSLSAGDDACDVRAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEH-----LKIQQAAATAGLAPTELCDRVSEQFQQLARHRVAVQHFWGVLKSRGLLYKGVYEGWYECFLPEAKVEENYIFRLSQFRKPLQRWLRGPDLSVSRRSSHPGDDSQTIYVWLDALVNYLTVIGYPNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMSPPQRICVHSCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVNWDCDYYDEKVVKLLNSDALGGLLN----RCTAKRINPSETYPAFCTTCFPSEPGLVGPSVRAQAEDYALVSAVATLPKQVADHYD----------NFRIYKALEAVSSCVRQTNGFVQRHA--PVDAPWLGTVLHVALECLRVFGTLLDKLLSRLGVSASER. 531
8 -7.990sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1 SV=2  ali   13  1..............................................................................................................................................................................................................................................................................................................................MASAPAEAETRQRLLRTVKKEVKQIMEEAVTR------------KFVHEDSSHIISFCAAVEACVLHGLRRRAAGFLRSNKIAALFMKVGKNFPPAEDLSRKVQD----------EQLIESARNQIQGLQENVRKLPKLPNLSPLAIKHL----IRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVD----------------GPILAS---LVGPCALE.. 181
9 -7.210sp|P51692|STA5B_HUMAN Signal transducer and activator of transcription 5B OS=Homo sapiens GN=STAT5B PE=1 SV=2  ali   16  1...................................................................................................................................................................................................................................................................................................................................................................................................QQAHDLLINKPDGTFLRFSDSEIGGITIAWKFDSQERMFWNLMPFTTRDFSIRSLADRLGDLNYLIYVFPDRPKDEV----------------------------YSKYYTPVPCESATAKAVDGYVKPQIKQV...................... 107
10 -7.190sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1 SV=4  ali   11  2.................................................................................................................................................................................................................................................................................................................................GSAEDAVKEKLLWNVKKEVKQIMEEAVTRKFVHEDSSHGAVEACLLHQLRRRAAGFLRSDKM-----------------------AALFTKVGKTCPVAGEICHKVQELQQQAEGRKPSGVSQEALRRQGSASGKAPALSPQALKHV----VRTALIEKVLDKVVQYLAENCSKYYEKEALLADPVF----------------GPILAS---LVGPCALE.. 182
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.