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Query: sp|Q7Z4H3|HDDC2_HUMAN HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAERSTNIAAAASEPHSLast
1 -96.600sp|Q7Z4H3|HDDC2_HUMAN HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1  ali  100  1MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLRKELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKFNHPEIVQLVSELEAERSTNIAAAASEPHS 204
2 -10.400sp|Q8N4P3|MESH1_HUMAN Guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase MESH1 OS=Homo sapiens GN=HDDC3 PE=1 SV=3  ali follow..  14  1.............MGSEAAQLLEAADFAARKHRQQRRKDPEGTPYIN-HPIGVARI--LTHEAGITDIVVLQAALLHDTVE----DTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRL---EQAPHSSPGAKLVKLADKLYNLRDLNRCTPEGWSEHRVQEYFE................................... 148
3 -9.390sp|Q9Y3Z3|SAMH1_HUMAN SAM domain and HD domain-containing protein 1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2  ali   11  140......................QFQRLRYIKQLGGGYYVFPGASHNREHSLGVGYLAGCLVHSERDVLCVQIAGLCHDLGHSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSN---GIKPVMEQYGLIPEEDICFIKEQPVEDSLWPYKGRPENKSFLYEI........................................ 300
4 -7.060sp|O76074|PDE5A_HUMAN cGMP-specific 3`,5`-cyclic phosphodiesterase OS=Homo sapiens GN=PDE5A PE=1 SV=2  ali   16  141............KHEVLCRWILSVKK-KNVAYHNWR------------HAFNTAQCMFAALKTDLEILALLIAALSHDLDHRGVNNSYIQRSEHP-CHSIMEHHHFDQCLMILNSPGNQILSGL-EEYKT-ATDLALYIKRRGEFFELIRKNQFN................................................. 295
5 -6.930sp|O00408|PDE2A_HUMAN cGMP-dependent 3`,5`-cyclic phosphodiesterase OS=Homo sapiens GN=PDE2A PE=1 SV=1  ali   10  185............DCPTLARFCLMVKKYRDPPYHNWM------------HAFSVSHFCYLLYKEDIEIFALFISCMCHDLDHRGTNNSSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHF................................................................................ 299
6 -6.740sp|P35913|PDE6B_HUMAN Rod cGMP-specific 3`,5`-cyclic phosphodiesterase subunit beta OS=Homo sapiens GN=PDE6B PE=1 SV=2  ali   18  236............PQEVLVRFLFSISKYRRITYHNW------------RHGFNVAQTMFTLLMTDLEAFAMVTAGLCHDI............................................................................................................................. 299
7 -6.500sp|Q9NYQ6|CELR1_HUMAN(removed signalp:1-20) Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens GN=CELSR1 PE=1 SV=1  ali   10  3.............................................................ETQVDGARALQLVATQHTGTLFGNDVRTAYQLGFDLAATQDADFHEDVIHSGSALLAPATRAAWEQIQRSEGGTAQLLRRLEGYFSNV....................................................... 107
8 -6.320sp|Q9Y3Z3|SAMH1_HUMAN SAM domain and HD domain-containing protein 1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2  ali   13  12...........................................HNRFEHSLGVGYLAGCLVHSERDVLCVQIAGLCHDLGHSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINS---NGIKPVMEQYGLIPEEDICFIKDVDKWDYFARDCHH.................................................. 172
9 -6.320sp|Q68DX3|FRPD2_HUMAN FERM and PDZ domain-containing protein 2 OS=Homo sapiens GN=FRMPD2 PE=1 SV=2  ali   16  95...................FLDSETRLCKIAPEGWREQPQKTQHSLTRHQFYLQLRKDIL-EERLYCNEEILLQLGVLALQAEFGNYPKEQVESKPYFHVEDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAKFLRVTQQLP.......................................................... 243
10 -6.310sp|Q8TCU4|ALMS1_HUMAN Alstrom syndrome protein 1 OS=Homo sapiens GN=ALMS1 PE=1 SV=3  ali   20  86.............................................................KTKTDYTRIKSLSINVNLGEVMDTTKSQVRDYPKHNGQISDPQRDQKVTPEQTTQHTVSLNELWNKYRERDRKELSLVDRLDRLAKILQN..................................................... 187
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.