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Query: sp|Q8N0U4|F185A_HUMAN Protein FAM185A OS=Homo sapiens GN=FAM185A PE=2 SV=3, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLAPCSGWELGCFRLCLRQVRLWAGAGRWACWACQARPYSSGGSERWPGSETEVPPPGPGRRTLKEWTLQVSPFGRLRARLPCHLAVRPLDPLTYPDGDRVLVAVCGVEGGVRGLDGLQVKYDEDLEEMAIVSDTIHPQASVEVNAPLKFGLDIKSSGSGCVKVQSIEGDNCKIETEHGTSILQSVKGQKLHVQTKGGKVICLGTVYGNIDIHASDKSAVTIDKLQGSSVTVSTEDGLLKAKYLYTESSFLSSAAGDITLGSVHGNITLQSKMGNITVDSSSGCLKASTNQGAIDVYVSQLGKVELKSHKGSIIVKVPSSLQAHLQLSGKEVDVNSEVHVQEMAEVRKDDVVTVTGLMNQASKREKWIKADAPKGTVSFRRQSWFQSLKLQDLast
1 -64.300sp|Q8N0U4|F185A_HUMAN Protein FAM185A OS=Homo sapiens GN=FAM185A PE=2 SV=3  ali  100  1MLAPCSGWELGCFRLCLRQVRLWAGAGRWACWACQARPYSSGGSERWPGSETEVPPPGPGRRTLKEWTLQVSPFGRLRARLPCHLAVRPLDPLTYPDGDRVLVAVCGVEGGVRGLDGLQVKYDEDLEEMAIVSDTIHPQASVEVNAPLKFGLDIKSSGSGCVKVQSIEGDNCKIETEHGTSILQSVKGQKLHVQTKGGKVICLGTVYGNIDIHASDKSAVTIDKLQGSSVTVSTEDGLLKAKYLYTESSFLSSAAGDITLGSVHGNITLQSKMGNITVDSSSGCLKASTNQGAIDVYVSQLGKVELKSHKGSIIVKVPSSLQAHLQLSGKEVDVNSEVHVQEMAEVRKDDVVTVTGLMNQASKREKWIKADAPKGTVSFRRQSWFQSLKLQD 392
2 -11.900sp|Q9HC77|CENPJ_HUMAN Centromere protein J OS=Homo sapiens GN=CENPJ PE=1 SV=2  ali   16  107..............................................................................................................................................................DGKVEKVYKNGCR-VILFPNGTRKEVSADGKTITVTFFNGDVK--QVMPDQRVIYYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDG-RKEITFPDQTVKNLFPDGQEESIFPDGTIVRVQRDGNKLIEFNNGQRELHTAQFGTVKTVYANGHQETKYRSG---RIRVKDKEGNVLMDTEL.................................................... 288
3 -8.610sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2  ali   12  4...............................................................................ESDFGINLKGPKIKGADVSGGVSAPDISLGEGHLSVKGSGGEWKGPQVSSALNLDTSKFAGGLHFSGPKVEGGVKGGQIGLQAPGLSVSGPQGHLESGSGKVTFPKMKIPKFTFSGRELVGREMGVDVHFPKAEASIQAGAG--DGEWEESEVKLKKSKIKMPKFNFSKPKGKGGVTGSPEASISGKGDLKSSKASLGSLEGEAEAEASSPKGKFSLFKSKKPRHRSNSFSDEREFSGPSTPTGTLEFEGGEVSLEGKVKGKHGKLKFGTFGGLGSKSKGHYEVTGSDDETGKLQG................. 300
4 -8.490sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2  ali   9  1...........................................................................KVDIDAP-DVSIEGPDAK--------KFKMPEMNIKAPKISMPDIDFNLKGPKVKGDVDVSLPKVEGDLKGP-------------EIDIKDIDTPDVNIEGPEGKLKGPKFKMPEMNIKAPKISMPDFDLHLKGPKVKGDVDVSLPKVESDLKGPEVDIEGPEGKLKGPKFKMPDVHFKSPQISMSDIDLNLKGPKIKGDMDISVPKLEGDLKGPKVDVKGPKVGIDTPDIDIHGPEGKLKGPKFKMPDLHLKAPK-DLNLKGPKVKGDMDISLPKVEGDLKGPEVDIRDPKVDIDVPDVDVQGPDWH......... 299
5 -8.230sp|Q9BRZ2|TRI56_HUMAN Tripartite motif-containing protein 56 OS=Homo sapiens GN=TRIM56 PE=1 SV=3  ali   9  66...............................................................................................................................................................................FGPREILVADEQNRALKRFSLNGDYKGTVPVPEGCSPCSVAALQSAVAFSASARLYLINPNGEVALSLSQASHAVAALPSGDRVAVSVAGHVEVYNMEGSL--GKASRGLRTTSPQGHFVGSDWQQNSVVICDGLGQVYIFLTLREVNKVVILDPKGSLLGDF---------LTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHI............. 297
6 -8.180sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 PE=1 SV=2  ali   6  1..................................................................................GREKATEDTEQGREGEATAADRREQRRTEEGLKDKEDSDSMTNTTKIQLIHD------EKRLKKEQILTEKEVATKDSKFKMPKFKMPLFGASAPGKSMEASDVSLLSMQGDLKTTDLSVQT--SADLEVQDGQVDVKLPEGPLPEGASLKGHLPKVQRPSLKMPKVDLKGPKLDLKGPKAE-DVKMSLSSMEVDVQAPRAKLDGARLEGDLS-----LADKEVTAKDSKFKMPKFKMPSFGVSAPGKSMEDSVDVSAPKVEADVSLSSMQGDLKATDLSIQPPSADLEVQAGQVDVK............ 300
7 -8.180sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2  ali   11  1..............................................................................LTGP-SVGVEVPDVELECPDAKLKFKMPEMHFKTPKISMPDVDLHLKGPKVKGDMDVSVPKVEGEMKVP-------------DVDIKDIDAPDVDVHGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADVVVSGPKV----DVEVPDVSLEGPEGKLKGPKLKMPEMHFKAP--KISMPDVDLHLKGPKVKGDVDVSLPKLEGDLTGPSVDVEVPDVELECPDAKLKGPKFKFKTPKISMPDVNLNLKGPKVKGDMDVSVPKVEGEMKVPDVDIRGPKVDIDAPDVDVHGPDWHLKMPKMK......... 297
8 -7.960sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 PE=1 SV=2  ali   11  5...........................................................................EIDIKGP-KLDLKDPKVEVTAPDVEVSLPSVEVDVEAPGAKLDGARLEGDLSLADKDMTAKDSKFKMKFKMPSFGVSAPGKSMEASVDVTDVSLPSMQGDLKATDLSVQPPSAD-LEVQAGQVDVKLPEGPVPEGASLKGHLPKVQMPSFKMPKVDLKGPQIDVKGPKLDLKGPKAEVTAPDVKMSLSSMEVDVQAPRAKLDGVQLEGDLDVTAKDSKFKMPKFKMPSFGVSAPGKSMEASVDLKAKADVSLPSMQGDLKTT----------------------DLSIQSPSADLEVQAGQVDVK............ 300
9 -7.950sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2  ali   9  5........................................................................PKADIDVSGP-KVDVDIPDVNIEGPDAKLKFKMPEINIKAPKISIPDVDLDLKGPKVKGDFDVSVPKVEGTLKGPE------LKGPRLDFEGPDAKLSGPSLKMPSLEISAPKVTAPDVDLHLKAPKIGFSGPKLEGGEVDLKGPKV----EAPSLDVHMDSPDINIEGPDVKIPKFKKPKFGFGAKSPKADPSLDVTVPEAELNLETPEISVGGKGKKSKFKMPKIHMSGPKIKAKKQGFDLNVPG---GEIDASLKAPDVDVNIAGPDAALKVDVKSPKTKKTMFG--------KMYFPDVEFDIK............ 298
10 -7.890sp|Q09666|AHNK_HUMAN Neuroblast differentiation-associated protein AHNAK OS=Homo sapiens GN=AHNAK PE=1 SV=2  ali   13  1...............................................................................KFKAEAPLPSPKLEGELQAPDLELSLPAIHVEGLDIKAKAPKVKMPDVDISVEGDLKGPKVQANLGAPDINIEGLDAKVKTGISAPQVSIPDVNVNLKGPKIKGDGLEGPDVDLQGPEAKIKFPKFSMPKIGIPGVKMEG----GGAEVHAQLPSLEGDLRGPDVKLEGPDVSLKGPGVDLPSVN-KVSGPDLDLNLKGPSLKGDLDASVPSMKVHAPGLNLSGVGGKMQVGGDGVKVPG-IDATTKLNVGAPDVTLRGPSLQGDLAVSGDIKC------KVSVGAPDLSLEASEGS................ 300
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.