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Query: sp|Q8NBV8|SYT8_HUMAN Synaptotagmin-8 OS=Homo sapiens GN=SYT8 PE=2 SV=3, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170
# Score Template Links and tools%idFirst MLHLHGWQTMQGRKMGHPPVSPSAPAPAGTTAIPGLIPDLVAGTPGPRWALIAGALAAGVLLVSCLLCAACCCCRRHRKKPRDKESVGLGSARGTTTTHLVQPDVDGLESSPGDAQQWGCLQLSLEFDFGSQEVKGPAAQDQRFCEFPERVTGEGQTPCPGWWGADRAGALGLast
1 -120.000sp|Q8NBV8|SYT8_HUMAN Synaptotagmin-8 OS=Homo sapiens GN=SYT8 PE=2 SV=3  ali  100  1MLHLHGWQTMQGRKMGHPPVSPSAPAPAGTTAIPGLIPDLVAGTPGPRWALIAGALAAGVLLVSCLLCAACCCCRRHRKKPRDKESVGLGSARGTTTTHLVQPDVDGLESSPGDAQQWGCLQLSLEFDFGSQEVKGPAAQDQRFCEFPERVTGEGQTPCPGWWGADRAGALG 172
2 -11.900sp|Q8TDW5|SYTL5_HUMAN Synaptotagmin-like protein 5 OS=Homo sapiens GN=SYTL5 PE=1 SV=1  ali   221..........................................................................QLSTNTHRLASGLSTTSLNSMMSVYSETGDYGNVKVS-------GEILLHISYCYKTGGLYVKNCRNLAIGDEKK----QRTDA.............. 295
3 -11.300sp|P53801|PTTG_HUMAN(removed signalp:1-32) Pituitary tumor-transforming gene 1 protein-interacting protein OS=Homo sapiens GN=PTTG1IP PE=1 SV=1  ali follow..  15  66.................................................LIITMSVVGGTLLLGIAICCCCCCRRKRSRKPD-RSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN....................................... 148
4 -11.000sp|Q9HCH5|SYTL2_HUMAN Synaptotagmin-like protein 2 OS=Homo sapiens GN=SYTL2 PE=1 SV=3  ali   19  1..........................................................................................SSSGMTSLSSVSGSVMSVYSGDFGNEVKGNIQFAIEYVESLKELHVAQCKDLAAAD----VKKQRSDP.............. 67
5 -10.700sp|O94812|BAIP3_HUMAN BAI1-associated protein 3 OS=Homo sapiens GN=BAIAP3 PE=1 SV=2  ali   12  77...................................................................................RLKEELRLHKCSTRECIEQFYLDKLKQRTLEQNRFGRLSVRCHYEAAEQRLAVE----LHAADLLPLDANGLSDP.............. 148
6 -10.700sp|Q58G82|SY14L_HUMAN Putative synaptotagmin-14-like protein OS=Homo sapiens GN=SYT14L PE=5 SV=2  ali follow..  7..........................................................................ILVQNTVQGTIHKIKCVCDSQMSVSEMSCSESTSACQSLEDGSVPEILISLLYNATNGRLSAE----IKGSHLKNWAANRPPNT.............. 87
7 -10.600sp|Q9Y2J0|RP3A_HUMAN Rabphilin-3A OS=Homo sapiens GN=RPH3A PE=1 SV=1  ali   12  58..........................................................................QRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERVGDIEERGKILVSLMYSTQQGGLIVG----IRCVHLAAMDANGYSDP.............. 138
8 -10.500sp|Q70J99|UN13D_HUMAN Protein unc-13 homolog D OS=Homo sapiens GN=UNC13D PE=1 SV=1  ali   2............................................................................................................QQAETTSEELGAVTVKASYRASEQKLRVE----LSASSLLPLDSNGSSDP.............. 48
9 -10.200sp|Q17RD7|SYT16_HUMAN Synaptotagmin-16 OS=Homo sapiens GN=SYT16 PE=2 SV=2  ali   12  162..............................................................................NSRGFEDSYATDSSSMWSPEEQDRTNLQVPSGVSEPISKCGDLDVIFEYRAASQKLTVT----VRAQGLPDKDRSGVNSW-PVFYAARKMTRMG 300
10 -9.950sp|O00445|SYT5_HUMAN Synaptotagmin-5 OS=Homo sapiens GN=SYT5 PE=2 SV=2  ali follow..  26  3.....................PEPPTPGPPSPDTPPDSSRISHGPVPPWALATIVLVSGLLIFSCCFCLYRKSCRRRTGKKQAQVHLQEVKGLGQSYIDKVQPEVEELEPQVADKHELGRLQYSLDYDFQSGQLLVG----LQAMGLAALDLGGSSDP.............. 146
11 -9.910sp|Q17RD7|SYT16_HUMAN Synaptotagmin-16 OS=Homo sapiens GN=SYT16 PE=2 SV=2  ali   26.......................................................................................NISSGGSPLSPSAVSHSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVE----IKGSHFRNLAVNRAPDT.............. 93
12 -9.800sp|Q9Y2J0|RP3A_HUMAN Rabphilin-3A OS=Homo sapiens GN=RPH3A PE=1 SV=1  ali   13  215.........................................................................................QPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLQCT----IKAKGLKPMDSNGLADPLPG........... 289
13 -9.610sp|Q8NEW7|TMIE_HUMAN(removed signalp:1-27) Transmembrane inner ear expressed protein OS=Homo sapiens GN=TMIE PE=1 SV=2  ali follow..  15  5......................PSTAPPKPKPPPLTKETVVFW-DMRLWHVVGIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETV-PPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKK.......................... 126
14 -9.510sp|Q17RD7|SYT16_HUMAN Synaptotagmin-16 OS=Homo sapiens GN=SYT16 PE=2 SV=2  ali   13  6..............................................................................EMETAFNSRGFEDSYATDSSSMWSPEEQDRSGVSEPISKCGDLDVIFEYRAASQKLTVT----VRAQGLPDKDRSGVNSW.............. 88
15 -9.400sp|Q14183|DOC2A_HUMAN Double C2-like domain-containing protein alpha OS=Homo sapiens GN=DOC2A PE=1 SV=5  ali follow..  14  51..............................................................................EAPAHLVPLALAPPAALLGATTPEDGAEVDSYDSDDATALGTLEFDLLYDRASCTLHCS----LRAKGLKPMDFNGLADP.............. 127
16 -9.140sp|Q9H5V8|CDCP1_HUMAN(removed signalp:1-29) CUB domain-containing protein 1 OS=Homo sapiens GN=CDCP1 PE=1 SV=3  ali   16  10....................NISNCSPTSGKQLDLLFSVTLTPRTVDLTVILIAAVGGGVLLLSAL--LIICCVKKKKKKTNKGPAVGIYNDNINTEMPRQPKKFQK-GRKDNDSHVYAVIEDTMVYGHLLQD---SGSFLQPEVDTYRPFQGTMGVCPP............ 145
17 -9.130sp|O94812|BAIP3_HUMAN BAI1-associated protein 3 OS=Homo sapiens GN=BAIAP3 PE=1 SV=2  ali   1......................................................................................AGTMGPDQVDDEEALLSYLQQV-FGTSLEEHTEAIERVRKAKAPTYALKVS----MRAKNLLAKDPNGFSDP.............. 68

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.