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current user: public |
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Query: sp|Q96IL0|CN153_HUMAN UPF0671 protein C14orf153 OS=Homo sapiens GN=C14orf153 PE=1 SV=2, from H.sapiens |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MVVLRAGKKTFLPPLCRAFACRGCQLAPERGAERRDTAPSGVSRFCPPRKSCHDWIGPPDKYSNLRPVHFYIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTESGQKATLNAEEMADFYKEFLSKNFQKHMYYNRDWYKRNFAITFFMGKVALERIWNKLKQKQKKRSN | Last |
1 | -83.000 | sp|Q96IL0|CN153_HUMAN UPF0671 protein C14orf153 OS=Homo sapiens GN=C14orf153 PE=1 SV=2 | ali | 100 | 1 | MVVLRAGKKTFLPPLCRAFACRGCQLAPERGAERRDTAPSGVSRFCPPRKSCHDWIGPPDKYSNLRPVHFYIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTESGQKATLNAEEMADFYKEFLSKNFQKHMYYNRDWYKRNFAITFFMGKVALERIWNKLKQKQKKRSN | 193 |
2 | -12.300 | sp|Q5H8A4|PIGG_HUMAN(removed signalp:1-19) GPI ethanolamine phosphate transferase 2 OS=Homo sapiens GN=PIGG PE=1 SV=1 | ali | 11 | 2 | ......................................................ALGLPIPKDSVGSLLFPVVEGRPMREQFLHLNTVQLSKLLQENVPSYEKDGFEQFKMSERLHGNWIRLYLEEKHSEVLFNLGSKVLRQYLDALKTLSLS---LSAQVAQYDIYSMMVGTVVVLEVLTLLLLSVPQALRR | 140 |
3 | -11.200 | sp|Q8TEQ8|PIGO_HUMAN(removed signalp:1-22) GPI ethanolamine phosphate transferase 3 OS=Homo sapiens GN=PIGO PE=2 SV=3 | ali | 12 | 8 | ......................................................LLGLPIPFGNIGEVMAELFSGGEDSQSALHLNAQQVSRFLHTYSAATQDLQAKELHQLQNLFSKASADYQWLQSPKGAEATLPTVIAELQQFLRGARA---MCIESWARFSLVRMAGGTALLAASCFICLLASQWAISP | 153 |
4 | -8.010 | sp|O95427|PIGN_HUMAN(removed signalp:1-16) GPI ethanolamine phosphate transferase 1 OS=Homo sapiens GN=PIGN PE=2 SV=1 | ali | 15 | 15 | ......................................................LIGVPFPLNSV-PVDYLNNTDLFKAESMFTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSDSKQFNILRKARSYIKHRKFDEVVSLCKELIHKGLSYYHTYDRFFLGVNVVIGFVGWISYASLLIIKSHSNLIKGVS | 158 |
5 | -7.360 | sp|Q6P1Q9|MTL2B_HUMAN Methyltransferase-like protein 2B OS=Homo sapiens GN=METTL2B PE=1 SV=3 | ali follow.. | 11 | 1 | .............................................................MAGSYPEGAPAILADKRQQFGSRFLSDPARVFHHNAW--DNVEWSEEQAAAAERKVQENSIQRVCQEKQVD---EINAHKYWNDFYKIHENGFFK-DRHWLFTEFPEL........................ | 103 |
6 | -7.300 | sp|Q6UXU6|TMM92_HUMAN(removed signalp:1-26) Transmembrane protein 92 OS=Homo sapiens GN=TMEM92 PE=2 SV=1 | ali follow.. | 16 | 33 | FVIIFLVILSVFCICGLAKCFCRNCREPEPDSPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVKPSLGPTPTEPPP---PYSFRPEEYTGDQRGI---DNPAF........................................................................................ | 133 |
7 | -7.170 | sp|Q92994|TF3B_HUMAN Transcription factor IIIB 90 kDa subunit OS=Homo sapiens GN=BRF1 PE=1 SV=1 | ali | 13 | 3 | ............................................................................DDLEIDRYILNESEARVKAELWMRENAEYLREQRE--KELGIYKEHKPKKSCKRREPIQASTAREAIEKMLEQKKSSKINYS................................... | 91 |
8 | -7.070 | sp|O14841|OPLA_HUMAN 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3 | ali | 13 | 69 | .......................................................VGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSPEARKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRALTQARGHDPSAHVLACFG..................... | 189 |
9 | -7.060 | sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3 | ali | 10 | 190 | .........................................................................SVDKKGNYHYLVKWRDL-PYDQSTWEEDIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDPTVKRFITATGGTLHMYQLEWLRFS............................ | 300 |
10 | -7.010 | sp|Q9UJ68|MSRA_HUMAN(removed signalp:1-26) Peptide methionine sulfoxide reductase OS=Homo sapiens GN=MSRA PE=2 SV=1 | ali follow.. | 13 | 64 | .................................................STQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDTQYSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYA---------EDYHQQYLSKN............................ | 189 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |