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Query: sp|Q9H8Q0|CXY02_HUMAN Putative uncharacterized protein encoded by NCRNA00105 OS=Homo sapiens GN=NCRNA00105 PE=5 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASHGGNTLEIVQKMGRCRLECGEGLRPCLVDGTVTAAVCLLGGASPPAAGRPLRETAESWSPGQPGGDPSAGHRGHSRQQELRTLSATLLSNLWTLSSGQSCRIRHRTYSSALGRGSLKKSPGLKTKRDTSVRDRRGDRHRGEGHVETEAETGVMRPQAQGRLEPPGAGRGGKDPPLEPLRKNQTQLQWVGWLast
1 -146.000sp|Q9H8Q0|CXY02_HUMAN Putative uncharacterized protein encoded by NCRNA00105 OS=Homo sapiens GN=NCRNA00105 PE=5 SV=1  ali  100  1MASHGGNTLEIVQKMGRCRLECGEGLRPCLVDGTVTAAVCLLGGASPPAAGRPLRETAESWSPGQPGGDPSAGHRGHSRQQELRTLSATLLSNLWTLSSGQSCRIRHRTYSSALGRGSLKKSPGLKTKRDTSVRDRRGDRHRGEGHVETEAETGVMRPQAQGRLEPPGAGRGGKDPPLEPLRKNQTQLQWVGW 193
2 -8.920sp|Q8TE85|GRHL3_HUMAN Grainyhead-like protein 3 homolog OS=Homo sapiens GN=GRHL3 PE=1 SV=3  ali   15  1..........................................................KHWHSRQPTADVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKI------------FCDKGAERKMRDDERKQFRRKVKCPD.... 124
3 -8.570sp|Q2WGJ9|FR1L6_HUMAN Fer-1-like protein 6 OS=Homo sapiens GN=FER1L6 PE=2 SV=2  ali   21  53.............................................................................SSDDFLGTLEMNLNSFPRAAKSAKACDLAKFENASEETKISIFQQKRVRGWWPFS------KSKELTGKVEAEFH---LVTAEEAEKNPVGKAR--KEPEPLAPNRPDTSFSWF.. 156
4 -8.500sp|Q6ISB3|GRHL2_HUMAN Grainyhead-like protein 2 homolog OS=Homo sapiens GN=GRHL2 PE=1 SV=1  ali   13  14......................................................LKYWKYWHSRQHTAKQRVLDIADYKESNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKV------------FCDKGAERKIRDEERKQNRKKGKG...... 139
5 -8.420sp|Q9HC10|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3  ali   18  25....................................................PARLTLQIWDADHFSADDFLG-----------AIELDLNRFPRGAKTAKQCTMEMATGEVDVPLVSIFKQKRVKG---PLLARNENDEFELTGKVEAELH---LLTAEEAEKNPVGLAR--NEPDPLEPNRPDTSFIWF.. 147
6 -8.290sp|P01860|IGHG3_HUMAN Ig gamma-3 chain C region OS=Homo sapiens GN=IGHG3 PE=1 SV=2  ali follow..  19  288..............................MTKNQVSLTCLVKGFYP-------SDIAVEWESSGQPENNYNTTPPMLDSDGSFFLYSKLTKSRWQQGNIFSCSVMHEALHNRFTQKSLSLSPG..................................................................... 376
7 -8.050sp|O75923|DYSF_HUMAN Dysferlin OS=Homo sapiens GN=DYSF PE=1 SV=1  ali   17  117.............................................................................SFDDFLGSLQLDLNRMPKPAKTAKKCSLD-QLDDAFHPEWFVSLFEQKTVKGWWPCVAEEGEKKILAGKLEMTLE---IVAESEHEERPAGQGRDNMNPKLEDPRRPDTSFLWF.. 228
8 -7.880sp|Q9NZI5|GRHL1_HUMAN Grainyhead-like protein 1 homolog OS=Homo sapiens GN=GRHL1 PE=1 SV=2  ali   12  18......................................................LRHWKYWHSRQHTADIADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQVDTYSYNNRSNKPVHRAYCQIKV------------FCDKGAERKIRDEERKQSKRKVSDVK.... 145
9 -7.750sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4  ali   15  103.............................................TFAKPTAEPGQDNPEWLISEDWALLQAVKQLLELPLNLTIVSPAHTPN-WDLVSDKQCRNRYENVIIPREEGKSKNNRPLRTSQIYAQDENATHTQLYTSHFDLMKMTAGKRSPPIKPLLGMNPFQ-NYDKPLPPIQVASLRAE.... 270
10 -7.660sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=MYOF PE=1 SV=1  ali   19  94.............................................................................SLDDYLGFLELDLRHTIIPAKSPEKCRLDMIPDLKAMNPLKAKTASLFEQKSMKGCYAEKDGARVMAGKVEMTLE---ILNEKEADERPAGKGRDNMNPKLDLPNRPETSFLWF.. 209
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.