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Query: sp|Q9NQ89|CL004_HUMAN Uncharacterized protein C12orf4 OS=Homo sapiens GN=C12orf4 PE=2 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKNRERFCNREREFVYKFKVGSQCLELRVPLKFPVQENASHLHGRLMLLHSLPCFIEKDLKEALTQFIEEESLSDYDRDAEASLAAVKSGEVDLHQLASTWAKAYAETTLEHARPEEPSWDEDFADVYHDLIHSPASETLLNLEHNYFVSISELIGERDVELKKLRERQGIEMEKVMQELGKSLTDQDVNSLAAQHFESQQDLENKWSNELKQSTAIQKQEYQEWVIKLHQDLKNPNNSSLSEEIKVQPSQFRESVEAIGRIYEEQRKLEESFTIHLGAQLKTMHNLRLLRADMLDFCKHKRNHRSGVKLHRLQTALSLYSTSLCGLVLLVDNRINSYSGIKRDFATVCQECTDFHFPRIEEQLEVVQQVVLYARTQRRSKLKESLDSGNQNGGNDDKTKNAERNYLNVLPGEFYITRHSNLSEIHVAFHLCVDDHVKSGNITARDPAIMGLRNILKVCCTHDITTISIPLLLVHDMSEEMTIPWCLRRAELVFKCVKGFMMEMASWDGGISRTVQFLVPQSISEEMFYQLSNMLPQIFRVSSTLTLTSKHLast
1 -140.000sp|Q9NQ89|CL004_HUMAN Uncharacterized protein C12orf4 OS=Homo sapiens GN=C12orf4 PE=2 SV=1  ali  100  1MKKNRERFCNREREFVYKFKVGSQCLELRVPLKFPVQENASHLHGRLMLLHSLPCFIEKDLKEALTQFIEEESLSDYDRDAEASLAAVKSGEVDLHQLASTWAKAYAETTLEHARPEEPSWDEDFADVYHDLIHSPASETLLNLEHNYFVSISELIGERDVELKKLRERQGIEMEKVMQELGKSLTDQDVNSLAAQHFESQQDLENKWSNELKQSTAIQKQEYQEWVIKLHQDLKNPNNSSLSEEIKVQPSQFRESVEAIGRIYEEQRKLEESFTIHLGAQLKTMHNLRLLRADMLDFCKHKRNHRSGVKLHRLQTALSLYSTSLCGLVLLVDNRINSYSGIKRDFATVCQECTDFHFPRIEEQLEVVQQVVLYARTQRRSKLKESLDSGNQNGGNDDKTKNAERNYLNVLPGEFYITRHSNLSEIHVAFHLCVDDHVKSGNITARDPAIMGLRNILKVCCTHDITTISIPLLLVHDMSEEMTIPWCLRRAELVFKCVKGFMMEMASWDGGISRTVQFLVPQSISEEMFYQLSNMLPQIFRVSSTLTLTSKH 552
2 -12.900sp|Q9BQ69|MACD1_HUMAN MACRO domain-containing protein 1 OS=Homo sapiens GN=MACROD1 PE=1 SV=2  ali follow..  15  153..............................................................................................................................................................................................................................................................................................KISLLRSDITKL-------------------------EVDAIVNAANSSLLGGGGVDGCIHRAA--------PLLTDECRTLQS---------------------------------------CKTGKAKITGGYRLPAKYVI-HTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAA-----AEIVLATLREWLEQ----HKDKVDRLIICV---FLEKDEDIYRSRLPHYFPVA......... 325
3 -12.900sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=2  ali   11  1..........................................................................................................................................................VIDYLKTEKKLFWPKIKKVNVQVSFNPENKQKGILLTGSKTEVLKAVDIVKQVWDSVCVKSVHTDKPGAKQFFQDKARFYQSEIKRLFGCYIELQENEVMKEGGSPAGQKCFSR-----------TVLAPGVVLIVQQGDLARL-------------------------PVDVVVNASNEDLKHYGGLAAALSKAA--------PELQADCDQIVKR-----------------------------------EGRLLPGNATISKAGKLPYHHVI-HAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRC-----VETIVSAIKENFQFKKD--GHCLKEIYLVD---VSEKTVEAFAEAVKTVFKAT......... 300
4 -12.400sp|Q9P0M6|H2AW_HUMAN Core histone macro-H2A.2 OS=Homo sapiens GN=H2AFY2 PE=1 SV=3  ali follow..  14  164..............................................................................................................................................................................................................................................................DSDKEGTSNSTSEDGPGDGFTILSSKSLVLGQKLSLTQSDISHI-----------------------SMRVEGIVHPTTAEIDLKEDIGKALEKAG--------KEFLETVKELRKS-----------------------------------QGPLEVAEAAVSQSSGLAAKFVI-HCHIPQ----GSDKCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTA-----AQVTLKAISAHFDDSSA---SSLKNVYFLL---FDSESIGIYVQEMAKLD............ 370
5 -11.800sp|O75367|H2AY_HUMAN Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY PE=1 SV=4  ali follow..  11  206..............................................................................................................................................................................................................................................................................................................................NLAGFEVEAIINPTNADIDLKDDLGNTLEKKG--------KEFVEAVLELRKK-----------------------------------NGPLEVAGAAVSAGHGLPAKFVI-HCNSP-----GADKCEELLEKTVKNCLALADDKKLKSIAFPSIGSGRNGFPKQTA-----AQLILKAISSYFVSTMS---SSIKTVYFVL---FDSESIGIYVQEMAKLD............ 370
6 -11.600sp|Q8IXQ6|PARP9_HUMAN Poly [ADP-ribose] polymerase 9 OS=Homo sapiens GN=PARP9 PE=1 SV=2  ali   11  126..............................................................................................................................................................................................................................................................................................................................DLTTHAVDAVVNAANEDLLHGGGLALALVKAG--------FEIQEESKQFVAR-----------------------------------YGKVSAGEIAVTGAGRLPCKQII-HAVGPRWMEWDKQGCTGKLQRAIVSILNIYKNTHIKTVAIPALSSGIFQFPLNLC-----TKTIVETIRVSLQGKPM--MSNLKEIHLVS---NEDPTVAAFKAASEFIL............ 296
7 -11.000sp|Q460N3|PAR15_HUMAN Poly [ADP-ribose] polymerase 15 OS=Homo sapiens GN=PARP15 PE=1 SV=1  ali   12  1................................................................................................................................................NNGAETSWQIMANIIKKCLTTVEVLSFSSI--TFPMIGTGSLQFPKAVFAKLILSEVFEYSSSTRPITSPLQEVHFLVYTNDDEGCQAFLDEFTNWSRINPNKARIPMAGDTQGVVGTVSKPCFTAYEMKIGAI--------TFQVATGDIAT-------------------------EQVDVIVNSTARTFNRKSGVSRAILEGA--------QAVESECAVLAA---------------------------------------QPHRDFIITPGGCLK-CKIIIHVPGGKDVRK-----------TVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITV-----ADNIIDAIVDFSSQHST---PSLKTVKVVI---FQPELLNIFYDSMKKRDLSASL....... 297
8 -11.000sp|Q460N3|PAR15_HUMAN Poly [ADP-ribose] polymerase 15 OS=Homo sapiens GN=PARP15 PE=1 SV=1  ali   15  75...........................................................................................................................................................................................................................................................................................................................................................DVLYIWADVIVNSVPMNLQLGGGPLSRAFLQKA-------------GPMLQKELDDRRRETEEKVGNIFMTSGCNLD-CKAVLHAVA-PYWNNGAETSWQIMANIIKKCLTTVEVLSFSSITFPMIGTGSLQFPKAVF-----AKLILSEVFEYSSSTRP-ITSPLQEVHFLV----DDEGCQAFLDEFTNWSRINPN....... 250
9 -11.000sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=2  ali   13  104..............................................................................................................................................................................................................................................................................................................................DITKEEADVIVNSTSNSFNLKAGVSKAILECA--------QNVERECSQQAQ---------------------------------------QRKNDYIITGGGFLRCKNII-HVIGGNDVKS-----------SVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKV-----AEAIIDAIEDFVQKGSA---QSVKKVKVVI---FLPQVLDVFYANMKKREGTQLS....... 261
10 -10.200sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=2 SV=1  ali follow..  13  20...........................................................................................................................................................................................................................................................GDSCQDELNSSDTTAEIFQEDTVRSPFLYNKDVNGKVVLWKGDVALL-------------------------NCTAIVNTSNESLTDKNPVSESIFMLA--------PDLKEDLQKLKG---------------------------------------CRTGEAKLTKGFNLAARFII-HTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDA-----THIALRTVRRFLEIH----GETIEKVVFAV----SDLEEGTYQKLLPLYFPRSLK....... 228
11 -10.200sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=2  ali   16  41...........................................................................................................................................................................................................................................................................................................................................................GVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKA-------------GPELQEELDTVGQGVAVSMGTVLKTSSWNLD-CRYVLHVVAPE--RNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIF-----AELIISEVFKFSSKNQL---KTLQEVHFLL................................ 190
12 -10.200sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=2  ali   13  2............................................................................................................................................................................................................................................................................................................................................................................................................................NDYIITGGGFLRCKNII-HVIGGNDVKS-----------SVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKV-----AEAIIDAIEDFVQKGSA---QSVKKVKVVI---FLPQVLDVFYANMKKREGTQLS....... 111
13 -10.000sp|A1Z1Q3|MACD2_HUMAN MACRO domain-containing protein 2 OS=Homo sapiens GN=MACROD2 PE=2 SV=1  ali follow..  13  4.......................................................................................................................................................................................................................SNKKKKVWREEKERLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEK----VSLYRGDITLL-------------------------EVDAIVNAANASLLGGGGVDGCIHRAA--------PCLLAECRNLNG---------------------------------------CDTGHAKITCGYDLPAKYVI-HTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPA-----AVIALNTIKEWLAK----NHHEVDRIIFCV---FLEVDFKIYKKKMNEFF............ 240
14 -9.480sp|Q8IXQ6|PARP9_HUMAN Poly [ADP-ribose] polymerase 9 OS=Homo sapiens GN=PARP9 PE=1 SV=2  ali   16  25..............................................................................................................................................................................................................................................................................................................................HIEWQTADVIVNSVNPHDITVGPVAKSILQQA--------VEMKSEFLATKAK------------------------------------QFQRSQLVLVTKGFNLF-CKYIYHVLWHSEFPKPQI-----LKHAMKECLEKCIEQNITSISFPALGTGNMEIKKETA-----AEILFDEVLTFAKDHVK----HQLTVKFVI--PTDLEIYKAFSSEMAK.............. 185
15 -9.350sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=2  ali   13  23....................................................................................................................................................................................................................................................................................................................................................................................................................KREGRLLPGNATISKAGKLP-YHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRC-----VETIVSAIKENFQFKKD--GHCLKEIYLVD---VSEKTVEAFAEAVKTVFKATLP....... 152
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.