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Query: sp|Q9UND3|NPIP_HUMAN Nuclear pore complex-interacting protein OS=Homo sapiens GN=NPIP PE=2 SV=3, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRNLast
1 -129.000sp|Q9UND3|NPIP_HUMAN Nuclear pore complex-interacting protein OS=Homo sapiens GN=NPIP PE=2 SV=3  ali  100  1MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRN 350
2 -114.000sp|Q86VD5|NPIL1_HUMAN NPIP-like protein 1 OS=Homo sapiens PE=2 SV=1  ali follow..  99  1MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPPECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSADDNLKTPPECVCSLPFHPQRMIISRN 369
3 -108.000sp|A8MZ50|NPIL4_HUMAN Putative NPIP-like protein ENSP00000381263 OS=Homo sapiens PE=5 SV=1  ali follow..  74  1MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRETDFGGSPWIIIIIVFLGRYKFTILFCTIYLCVPFLKTIFWSRNGHDRSRDVQQRARRSNRRRQEGIKIGLEDICTLWKQAETKVQAKIRKMKVTKKVNHHYKINGKRKTAKEHLRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKMFQRAQELRWRAEDYHKCKITPSARKPLCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLIPLPPSPLPPS---VDDNLKTPPLATQEAEAEKPKRQRLSKLRTGHCTQAWAIRRN....................... 327
4 -108.000sp|A6NHP6|YR011_HUMAN NPIP-like protein ENSP00000283050 OS=Homo sapiens PE=3 SV=2  ali follow..  73  1MFCCLGYEWLSGGCKTWHSAWVINTLADHHHCGTGFRGSPWLHFIIAFPRSYKVFIILWTVYLWMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAKNHLRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKMFQRVQELWRRAEDYHKRKIPPSARKPLCNWVRMVAAEHRHSSGLPYWPYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLRPLPPSVDDNIKECPLAPL-----PPSPLPPSVDDNLKECLLAPLPPSPLPPSVDDNLKTP.................. 327
5 -96.900sp|A6NJ64|NPIL2_HUMAN NPIP-like protein 2 OS=Homo sapiens PE=3 SV=3  ali follow..  71  1MFCCLGYEWLSGGCKTWHSAWVINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVLTLWTVYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETKGRAKIRKMKVTTKINHHDKINGKRKTAKKQ--KLSVKECEHAEKERQVSEAEENGKLDMKEIHTYMKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPPECLLTPLPPSAPPSADDNLKTPPLATQEAEAEKPPKPKRWRAAEMESPPEPKRRRAAEVESPP. 347
6 -69.300sp|Q6ZNL0|YP009_HUMAN GPS, PLAT and transmembrane domain-containing protein FLJ00285 OS=Homo sapiens PE=2 SV=2  ali   94  115.....SYKFAISLCTTYL--WVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRR............................................................................................................................................................. 300
7 -58.000sp|Q92617|NPPL3_HUMAN Nuclear pore complex-interacting protein-like 3 OS=Homo sapiens GN=NPIPL3 PE=1 SV=5  ali   67  4LSIVLTPQFLSHDCPCEYLRKVINTLADHHHRGTDFGGSPWLHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQK------------------------------------MFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL----KTPPECVLTPLPPSADDN.............................................. 300
8 -58.000sp|A8MRT5|K220L_HUMAN Putative NPIP-like protein KIAA0220-like OS=Homo sapiens GN=KIAA0220L PE=5 SV=2  ali   67  4LSIVLTPQFLSHDCPCEYLRKVINTLADHHHRGTDFGGSPWLHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQK------------------------------------MFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL----KTPPECVLTPLPPSADDN.............................................. 300
9 -57.700sp|Q6ZNL0|YP009_HUMAN GPS, PLAT and transmembrane domain-containing protein FLJ00285 OS=Homo sapiens PE=2 SV=2  ali   98  1...........................................IITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCT...................................................................................................................................... 173
10 -57.000sp|A6NHN6|NPPL2_HUMAN(removed signalp:1-18) Nuclear pore complex-interacting protein-like 2 OS=Homo sapiens GN=NPIPL2 PE=3 SV=2  ali follow..  64  5................................................................VSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK------------------------------------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSSGLPCWPYLTAEALKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLHPLPPSVDDN-------IKECPLAPLPPSVDDNLKELVPLPPSPLPPSVDDNLKDCLFVPLPPSPLPPSVDDNLKTPP. 265
11 -54.000sp|A6NJU9|YP038_HUMAN Putative NPIP-like protein ENSP00000342480 OS=Homo sapiens PE=5 SV=3  ali   66  4LSIVLTPQFLSHDCPCEYLRKVINTLADHHHRGTDFGGSPWLHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECVLTPLPPSADDNL----KTPPECVLTPLPPSADDN.............................................. 300
12 -41.800sp|O75200|NPPL1_HUMAN(removed signalp:1-18) Nuclear pore complex-interacting protein-like 1 OS=Homo sapiens GN=NPIPL1 PE=3 SV=2  ali follow..  49  5................................................................VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLFV--PGQDMDTFFSLQLCAQALQREMAEHSPIPVGNRVVQKHLHPHPVGP................................................................................... 201
13 -41.800sp|A6NF02|NPIL3_HUMAN(removed signalp:1-18) NPIP-like protein ENSP00000346774 OS=Homo sapiens PE=3 SV=1  ali follow..  48  5................................................................VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVSLFV--PGQDMDTFFSLQLCAQALQREMAEHSPIPVGNRVVQKHLHPHPVGP................................................................................... 201
14 -18.600sp|Q92617|NPPL3_HUMAN Nuclear pore complex-interacting protein-like 3 OS=Homo sapiens GN=NPIPL3 PE=1 SV=5  ali   75  1..................................................................................................................TKVRAKIRKRKVTTKINHHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL----KTPPECVLTPLPPSADDNLKTPPECVLTPLPPSADDN---LKTPPECLLTPLPPSADDNLKTP. 192
15 -18.600sp|A8MRT5|K220L_HUMAN Putative NPIP-like protein KIAA0220-like OS=Homo sapiens GN=KIAA0220L PE=5 SV=2  ali   75  1..................................................................................................................TKVRAKIRKRKVTTKINHHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL----KTPPECVLTPLPPSADDNLKTPPECVLTPLPPSADDN---LKTPPECLLTPLPPSADDNLKTP. 192
16 -15.700sp|A6NJU9|YP038_HUMAN Putative NPIP-like protein ENSP00000342480 OS=Homo sapiens PE=5 SV=3  ali   75  1..................................................................................................................TKVRAKIRKRKVTTKINHHDKINGKRKTARKQ------------------------------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECVLTPLPPSADDNL----KTPPECVLTPLPPSADDNLKTPPECLLTPLPPSADDN---LKTPPECLLTPLPPSADDNLKTP. 192
17 -14.000sp|Q92617|NPPL3_HUMAN Nuclear pore complex-interacting protein-like 3 OS=Homo sapiens GN=NPIPL3 PE=1 SV=5  ali   45  155..........................................................................................................................................................................................................................HLPSVSSLPFHPQLHPQQMIISRHLPSVCGERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPPPSADDNLKTP. 286
18 -13.500sp|A6NJU9|YP038_HUMAN Putative NPIP-like protein ENSP00000342480 OS=Homo sapiens PE=5 SV=3  ali   39  137.................................................................................................................................................................................................ISRHLPSVCGGRFHPQRMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPPPSADDNLKTP. 293
19 -12.300sp|A6NJU9|YP038_HUMAN Putative NPIP-like protein ENSP00000342480 OS=Homo sapiens PE=5 SV=3  ali   50  1...................................................................................................................................................................................................KTPAERLRGPLPPSADDN---LKTPSERQLTPLPPSAPPSADD-NIKTPAERLRGPLPPSADDN---LKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAF................. 131
20 -10.500sp|Q92617|NPPL3_HUMAN Nuclear pore complex-interacting protein-like 3 OS=Homo sapiens GN=NPIPL3 PE=1 SV=5  ali   50  1.................................................................................................................................................................................................................................................KTPAERLRGPLPPSADDN---LKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTALPPSADDNI---KTPAERLRGPLPPSADDNLKTP. 102
21 -9.550sp|P41440|S19A1_HUMAN Folate transporter 1 OS=Homo sapiens GN=SLC19A1 PE=1 SV=3  ali follow..  462....................................................................................................................................................................................................................................HHPRQPPAQGLRSAAEEKAAQALSVQDKGLGGLQPAQSPPLSPEDSLGAVGPASLEQRQSDPYLAQAPAPQAAEFLSPVTTPSPCTLCSAQASGPEAADETCPQLAVHPPGVSKLGLQCLP. 582
22 -9.220sp|O75845|SC5D_HUMAN Lathosterol oxidase OS=Homo sapiens GN=SC5DL PE=1 SV=2  ali follow..  12  128FFTDMFIYWIH---RGLHHRLVYKRLHKPHHIWKIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHT----DHHMFFDYNY----GQYFTLWDRISFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE.................................................................................................................................................................................................... 299
23 -9.110sp|Q8WXG1|RSAD2_HUMAN(removed signalp:1-15) Radical S-adenosyl methionine domain-containing protein 2 OS=Homo sapiens GN=RSAD2 PE=1 SV=1  ali follow..  16  70YKCCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKINFGGEPFLQ-LGKLVRFCKVSVSIVSNGSLIRWFQNYGEYLDILAISCDSFDEEVNVLIGRGQGKKNHVENLQKLRRWCR-DYRVAFKINSVINRFNVEEDMTEQIKALNP............................................................................................................................................................................................................. 227

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.