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Query: sp|Q9Y6N5|SQRD_HUMAN Sulfide:quinone oxidoreductase, mitochondrial OS=Homo sapiens GN=SQRDL PE=1 SV=1, from H.sapiens

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVPLVAVVSGPRAQLFACLLRLGTQQVGPLQLHTGASHAARNHYEVLVLGGGSGGITMAARMKRKVGAENVAIVEPSERHFYQPIWTLVGAGAKQLSSSGRPTASVIPSGVEWIKARVTELNPDKNCIHTDDDEKISYRYLIIALGIQLDYEKIKGLPEGFAHPKIGSNYSVKTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRSKANIIFNTSLGAIFGVKKYADALQEIIQERNLTVNYKKNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKETLQHRRYPNVFGIGDCTNLPTSKTAAAVAAQSGILDRTISVIMKNQTPTKKYDGYTSCPLVTGYNRVILAEFDYKAEPLETFPFDQSKERLSMYLMKADLMPFLYWNMMLRGYWGGPAFLRKLFHLGMSLast
1 -106.000sp|Q9Y6N5|SQRD_HUMAN Sulfide:quinone oxidoreductase, mitochondrial OS=Homo sapiens GN=SQRDL PE=1 SV=1  ali  100  1MVPLVAVVSGPRAQLFACLLRLGTQQVGPLQLHTGASHAARNHYEVLVLGGGSGGITMAARMKRKVGAENVAIVEPSERHFYQPIWTLVGAGAKQLSSSGRPTASVIPSGVEWIKARVTELNPDKNCIHTDDDEKISYRYLIIALGIQLDYEKIKGLPEGFAHPKIGSNYSVKTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRSKANIIFNTSLGAIFGVKKYADALQEIIQERNLTVNYKKNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKETLQHRRYPNVFGIGDCTNLPTSKTAAAVAAQSGILDRTISVIMKNQTPTKKYDGYTSCPLVTGYNRVILAEFDYKAEPLETFPFDQSKERLSMYLMKADLMPFLYWNMMLRGYWGGPAFLRKLFHLGMS 450
2 -47.300sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=2 SV=1  ali follow..  12  2.................................GSQVSVESGALHVVIVGGGFGGIAAASQLQAL--NVPFMLVDMKDSFHHNVAALRASVETGFAKKTFISYSVTFK--DNFRQGLVVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKF----NEVSSQQAAIQAYEDMVRQVQRSRFI----VVVGGGSAGVEMAAEIKTEY-----------PEKEVTLIHSQVALAKELLPSVRQEVKEILLRKGVQLLLSERVSNLEELPLNEYREYIKQTDKGTEVATNLVILCTGIKINSSAYRKAFEASSGALRVNE-HLQVEGHSNVYAIGDCADVRTPKMAYLAGLHANIAVANIVNSVKQRPLQAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLTK............................................ 355
3 -28.300sp|Q8WU10|PYRD1_HUMAN Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=PYROXD1 PE=1 SV=1  ali follow..  11  2..................................EAARPPPTAGKFVVVGGGIAGVTCAEQLATHFPSEDILLVTASPVIKAVTNFKQISKILEEFDVEEQSSTMLGKRFIKVIESGVKQLKSEEHCIVTEDGNQHVYKKLCLCAGAKPKLICEG-------NPYVLGIRDTDSAQEFQKQLTKAKR-IMIIGNGGIALELVYEIEGCAEFLTSKLIAEKSETKEFSHKIHLETMCEVKKIYLQDEFRILKKKSFTFPRDHKSVTADTEMWPVYVE----LTNEKIYGCDFIVSATGVTPNVEPNSFDLGEDGG-LKVDDH---HTSLPDIYAAGDICTTSWQLSPTQARQMGWYAAKCMAAASSGDSIDMDFSFELFAHVTKFFNYKVVLLGKYNAQGLGSDHELMLRCTKGREYIKVVMQNGRMMGAVLIGETDLEETFENLILNQMN 480
4 -27.500sp|Q8NHU2|CT026_HUMAN Uncharacterized protein C20orf26 OS=Homo sapiens GN=C20orf26 PE=2 SV=3  ali   10  48.........................ALNHTNRKLTLEPKITVNAKIIVVGASSVGISFLETLVFCMKFNNLTLISTHGLPGKKLLDTEQRKFLASDHCFNDKDYALMCSWVNVVVGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVPCPTEADISQHLTNHFTLNEEEDCFKALIWIRNNSITTIVYGNTIDTYTT----------VETLLNLGVSGSRIHLVQPPPASTIINNYSVESAVADALGAAGVTMYRD.............................................................................................................................................................................................. 300
5 -25.300sp|Q96NN9|AIFM3_HUMAN Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1  ali   11  24......................LQRRTKVMAKCISPSAGYSSSTNVLIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSLDTQPEQLALRPKEFFRAYGIEVLTEQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGSSPKTLSCKGKEVE----NVFTIRTPEDANRVVRLARGRN--VVVVGAGFLGMEVAAYLTEKA-------------HSVSVVELEETPFRFLGERVGRALMKMFENNRVKFYMQTEVSELRGQEGKL---KEVVLKSSKVVRADVCVVGIGAVPAGFLRQSGIGLDSR........................................................................................................................................ 296
6 -25.000sp|O95831|AIFM1_HUMAN Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1  ali   11  1..............................................................RARDPGARVLIVSEDPELPYMPLSKELWFSDDPNVTKTLDLPHIENGGVAVLTGKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVK-SITIIGGGFLGSELACALGRKA---------RALGTEVIQLFPEKGNMGILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK----LKDGRKVETDHIVAAVGLEPNELAKTGGLESDFGGFRVNA---ELQARSNIWVAGDAACFYDIKLG........................................................................................................ 298
7 -22.600sp|P00390|GSHR_HUMAN Glutathione reductase, mitochondrial OS=Homo sapiens GN=GSR PE=1 SV=2  ali follow..  15  38................RALSRAMACRQEPQPQGPPPAAGAVASYDYLVIGGGSGGLASARRAAEL--GARAAVVESHKL----PKKVMWNTAVHPSCEGKFNWRVIKKSHIEIIRGHAAFTSDPKPTIEV-SGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQ----------LEELPGRSVIVGAGYIAVEMAG---------------SALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVVPGRLPVMTMIPDVDCLLWAIGRVPNT-LNKLGIQDDKGHIIVDEF--QNTNVKGIYAVGDVCG---ALLTPVAIAAGRKLAHRLFE........................................................................................ 399
8 -21.800sp|O95831|AIFM1_HUMAN Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1  ali   13  93....KRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMPLSKELWFSDDPNVTKTLRFKQIENGGVAVLTGKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV......................................................................................................................................................................................................................................................................... 300
9 -21.500sp|Q8NHU2|CT026_HUMAN Uncharacterized protein C20orf26 OS=Homo sapiens GN=C20orf26 PE=2 SV=3  ali   9  1............................................................................................................................AKHVVLSTDEIVPYDHLILCTGQQYQVPCPTEADTGKVPCNHFTLNEEEDCFKALIWIRNNEGNIIVYGNTIDTYTTVETLLNLGVSG----------SRIHLVQPPPASTIINNYSVESAVADALGAAGVTMYRDAILAQWGLHPDPIYSASFTTPTKPFRLQCSMFFSFCEKNVDKALNDACLVYDSR-LVIDTN---HTNDIAIRAAGSLTKFSNRYYSNESKEIGFQLAAAMLHLFD..................................................................................... 265
10 -21.000sp|Q9NNW7|TRXR2_HUMAN Thioredoxin reductase 2, mitochondrial OS=Homo sapiens GN=TXNRD2 PE=1 SV=3  ali follow..  14  2.....AAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQL--GRKVAVVDYQAALLGGLIQDAPNYGWEVAQPVPHDWRKMADRKVKYFNIKASFVDEHTVCGVAKGGKELSADHIIIATGGRPRYPTHIEGALEYGITSDDIF-----------WLKESPGKTLVVGASYVALECAG---------------TGIGLDTTIMM-RSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDT-LEKAGVDPDTQKILVDSR--EATSVPHIYAIGDVVE-GRPELTPIAIMAGRLLVQRLFG........................................................................................ 384
11 -19.400sp|P09622|DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2  ali follow..  14  23........................GLQGLSAVPLRTYADQPIDADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNET----PSKALLNNSHY-VKALTGGIAHLFKQKVVHVNGYGKITGKNQVTATKADGQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGAL-----------SLKKVPEKMVVIGAGVIGVELGSVWQRL--------------ADVTAVEFLGHVGGVGIDEISKNFQRILQKQGFKFKLNTKVTGATSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT-LEELGIEDPRGRIPVNTRF--QTKIPNIYAIGDVVA---PMLAHKAEDEGIICVEGMAG........................................................................................ 379
12 -18.400sp|Q9UJX0|OSGI1_HUMAN Oxidative stress-induced growth inhibitor 1 OS=Homo sapiens GN=OSGIN1 PE=2 SV=2  ali follow..  13  57LCVTPGQGCGHQGQDEGPLPAPSPPPAMSSSRKDHLGASSSEPLPVIIVGNGPSGICLSYLLSRKEHAIPHVVLGRNLWHSIEGSMVILSQGQWTAGDIAHYYRDYLGHNFVS-GAVVTAVEWGTPLTRNQAQQPFSLRNVVLATGTSPARLGIPGEALPFIHHELSALEAATRVGAVTPASDPV----LIIGAGLSAADAVLYARHYNIPVIHAFRRAVDDPGLVFNQLPKMLYPEYHKVHQMMREQSILSEGYRSLPRHQLLCFKEDCQAVF---QDLEGVEKVFGVSLVLVLIGSHPDSFLPGAGLSAKRNPIDVDPFTYQSTRQEGLYAMGPLAG---DNFVRFVQGGALAVASSLLRKETRKPP................................................................................. 560
13 -18.000sp|Q96NN9|AIFM3_HUMAN Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1  ali   15  180............................VMAKCISPSAGYSSSTNVLIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSLDTQPEQLALRPKEFFRAYGIEVLTEQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGSS.............................................................................................................................................................................................................................................................................................................. 300
14 -17.800sp|Q86VQ6|TRXR3_HUMAN Thioredoxin reductase 3 (Fragment) OS=Homo sapiens GN=TXNRD3 PE=1 SV=3  ali   13  2........................................................................................................SLREKAVAYVNSYGEFVEHHKIKATNKKGQEYTAAQFVIATGERPRYLGIQGDKEYCITSDDLF------------SLPYCPGKTLVVGASYVALECAG---------------AGFGLDVTVMV-RSILLRGFDQEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCT-LEKIGVKEKSGKIPVNDV--EQTNVPYVYAVGDILE-DKPELTPVAIQSGKLLAQRLFG........................................................................................ 242
15 -16.700sp|Q9Y236|OSGI2_HUMAN Oxidative stress-induced growth inhibitor 2 OS=Homo sapiens GN=OSGIN2 PE=2 SV=1  ali follow..  13  1...........................MPLVEETSLLEDSSVTFPVVIIGNGPSGICLSYMLSKLEEARHLSIVDQDLEYLSEPVAVLFDTLLHPDADFGYDYPSVLHHYIPHVNTYITSVSRLYREIRGHVPFCLFAENVALATGTSPAHLEIEGEDFPFVFHSMPEFGAAINKGKLRGKVDPV----LIVGSGLTAADAVLCAYNSNIPVIHVFRRRVTDPSLIFKQLPKKLYPEYHKVYHMMCTQSYSVDSYTSFPEHRVLSFKSDMKCVL---QSVSGLKKIFKLSAAVVLIGSHPNSFLKDQGCYCKGNPVEIDTYTYECIKEANLFALGPLVG---DNFVRFLKGGALGVTRCLATRQKKKHLFVERGGGDG........................................................................ 503
16 -16.200sp|Q16881|TRXR1_HUMAN Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens GN=TXNRD1 PE=1 SV=3  ali   14  1...............................MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFQAALLGQALQDSRNYGWKVEETVKHDWDRMIEKKVVYENAYGQFIGPHRIKATNNKGKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLF------------SLPYCPGKTLVVGASYVALECAG---------------AGIGLDVTVMV-RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIERLRVVAQSTNSEEIIEGEYNTVMLAIGRDA...................................................................................................................................................... 295
17 -15.300sp|Q86VQ6|TRXR3_HUMAN Thioredoxin reductase 3 (Fragment) OS=Homo sapiens GN=TXNRD3 PE=1 SV=3  ali   11  3ITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLAYDYDLIIIGGGSGGLSCAKEAAIL--GKKVMVLDFQAALLGQALCDSRKFGWEYNQQVRHNWETMTEKAVAYVNSYGEFVEHHKIKATNKKGQEYTAAQFVIATGERPRYLGIQGDKEYCITSDDLF------------SLPYCPGKTLVVGASYVALECAG---------------AGFGLDVTVMV-RSILLRGFDQEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKGSPGK.............................................................................................................................................................................. 299
18 -14.600sp|Q16881|TRXR1_HUMAN Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens GN=TXNRD1 PE=1 SV=3  ali   15  2.......................................................................................................................................YSAERFLIATGERPRYLGIPGDKEYCISSDDLF------------SLPYCPGKTLVVGASYVALECAG---------------AGIGLDVTVMV-RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIERLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT-LETVGVKEKTGKIPVTDE--EQTNVPYIYAIGDILE-DKVELTPVAIQAGRLLAQRLYA........................................................................................ 209
19 -14.300sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2  ali   12  6...........QQFATEVFKAMSIPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARL-GYSDITIFEKQEY-----STSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLS----VNEMTLSTLKEKGYKAAFIGIGLPEP-TQDQGFYTSKDFLPLVAKGSKAGMCACHSPLPSIRGVVIVLGAGDTAFDCATSALRC-------------ARRVFIVFRKGFVNIRAVPE-----MELAKEEKCEFLPFLSPRKVIVKGGRIVAMQ--------------------------FVRTEQDETGKWNEDEDQMVHLKADVVISAFGSVLSDPKVKEA........................................................................................................ 300
20 -14.200sp|P22570|ADRO_HUMAN(removed signalp:1-24) NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Homo sapiens GN=FDXR PE=1 SV=3  ali follow..  10  1.............................TPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH-PQAHVDIYEKQPV-----VRFGVAPDHPEVKNVINTFTQTAHSRCAFWGNVEVGRDVTVPELR-------AYHAVVLSYGAEDHRAEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAILGQGNVALDVARILLTERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKELREMIQLPGARPILGRRAAGVRLAVTRLEGVDEATTGDMEDLPCGLVLSSIGYKSRPV--DPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIAT-TMTDSFLTGQMLLQDLKAGLLPS............................................................................... 408
21 -13.800sp|Q96NN9|AIFM3_HUMAN Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1  ali   17  2............KTLSCKGKEVENVFTIRTPEDANRVVRLARGRNVVVVGAGFLGMEVAAYLTEK--AHSVSVVELEETPFRRFLGERVGRALMKMFE---------NNRVKFYMQEVSELRGQEKEVVLKSSKVVRADVCVVGIGAVPA------------------------------------------------------------------------------------------------------------------------------------------------------TGFLRQSGIGDSRGFIPVNKM---QTNVPGVFAAGDAVTFPLAPHWQMAHAQGRVAAQNMLAQ....................................................................................... 203
22 -13.700sp|O95831|AIFM1_HUMAN Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1  ali   15  1...........................................KSITIIGGGFLGSELACALGRKARATEVIQLFPEKGNMGKILPEYLSNWTMEKVR---------REGVKVMPNAVQSVGVSSGLIKLKDGRKVETDHIVAAVGLEPN------------------------------------------------------------------------------------------------VELAKTGGLE----------------------------------------------------IDSDFGGFRVNA---ELQARSNIWVAGDAACFYDIKLGRRAVVSGRLAGENMTGA....................................................................................... 172
23 -13.600sp|Q6QHF9|PAOX_HUMAN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens GN=PAOX PE=1 SV=3  ali   14  2...............................ESTGSVGEAPGGPRVLVVGGGIAGLGAAQRLCGHSAFPHLRVLEATAR----------AGGRIRSERCF---GGVVEVGAHWIHGLGEKELSQENQLVETGGHVGLPSVSYASSGTSVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEY......................................................................................................................................................................................................................................................................... 158
24 -13.100sp|Q14534|ERG1_HUMAN(removed signalp:1-43) Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=3  ali follow..  8  40..SPPESENKEQLEARRRRKGTNISETSLIGTAACTSTSSQNDPEVIIVGAGVLGSALAAVLSRD--GRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPL-----------------------SENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAPLTV----------VADGLFSKFRKSLVSNKVSVSSHFVIYQISSSETRVLVDRGEMPRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGVAFKDIKLWRKLLKGIPDLYDDAA............................................................................... 403
25 -13.000sp|Q9H9P8|L2HDH_HUMAN L-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=L2HGDH PE=1 SV=3  ali follow..  13  22................GSPGACGFASGRPRPLCGGSRSASTSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKD---------LAVHQTGHNS------GVIHSGIYYKPESL-------KAKLCVQGAALLYEYLIVAVE-QEEIPRLQALYEKGLQNGVP---------------------------------------GLRLIQQEDIKKKEPYCRGLMAIDCPHTGIVDYRQVALSFAQDFQEAGGSVLTNFEVKGIEMAKESPSRSIDGMNTKGEEIRCQYVVTCAGLYSDRISELSGCTPDPRIVPFRGDYLLLKPEKCYLVKGNIYPVPDSRFPFLGVHFTPRMDGSIW......................................................................................... 324
26 -12.900sp|Q8IWF2|FXRD2_HUMAN(removed signalp:1-26) FAD-dependent oxidoreductase domain-containing protein 2 OS=Homo sapiens GN=FOXRED2 PE=1 SV=1  ali   12  1.......................................VPPRRDYCVLGAGPAGLQMAYFLQRA--GRDYAVFERAPLLSHDPRLLFRHYSRADARDMVRYLGDFADTGLRVYNTTIAHVTLDKDRLTDQKGQVHQCSVLFVATGLSVNQVDFPGSE------------YAEGYESVSVDPEDFVGQNVILGRGNSAFETAENILGVTNFIHMLSRSR-------VRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLKDSKGKFHVTPKFFLEEANTNQSADSITLPQDDNDNF................................................................................................................................................... 300
27 -12.700sp|Q9UHG3|PCYOX_HUMAN(removed signalp:1-27) Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1 PE=1 SV=3  ali follow..  10  1....................................AELRAPPDKIAIIGAGIGGTSAAYYLRQKFGDVKIDLFEREE-----------VGGRLATMMVQ---GSVIHPLNLHMKRFVKDLGLSAVQASGGLLGIYNGETLVFEESNWFIINVIKLVWRYGFQSLRMHMWVEDVLDKFMRIYRYQSHDYAFSSVEKHALGGDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQSTDLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTQIGTETRSDFYDVLVATPLNRKMSNITFLNFDPPI-YQHIVTTLVKGELNTSIFSSRPIDKFGLNTVLTTDNSDLFINSIGIVPSVREKEDPE............................................................................... 369
28 -12.500sp|Q8NBM8|PCYXL_HUMAN(removed signalp:1-22) Prenylcysteine oxidase-like OS=Homo sapiens GN=PCYOX1L PE=1 SV=2  ali follow..  8  1.......................................DAPPGKIAVVGAGIGGSAVAHFLQQHFGRVQIDVYEKGT-----------VGGRLATISVN---AASFHSLSLHMQDFVKLLGLRHRREVVGRSAIFGGEHFMLEETDWYLLNLFRLWWHYGISFLRLQMWVEEVMEKFMRIYKYQAHGYAFSGVEEYSLGESTFVNMTQHSVAESLLQVGVTQRFIDDVVSAVLRASYGQSAKLVCSGLLKLTKANVIHATVTSVTSTEGKALYQVAYENEVGNSSDFYDIVVIATPLH....................................................................................................................................................... 283
29 -12.400sp|Q9Y2Z2|MTO1_HUMAN Protein MTO1 homolog, mitochondrial OS=Homo sapiens GN=MTO1 PE=1 SV=2  ali   15  1MFYF-------RGCGRWVAVSFTKQQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARC--GSRTLLLTHRVDTIGQMSCNPSFGGQIDRKLYKQNMQKEILNLLTVQEGAVEDLILTEPEVVLVDGSTVYAESVILTTGTFLRGMIVIGLET................................................................................................................................................................................................................................................................................................... 207
30 -11.700sp|O15229|KMO_HUMAN Kynurenine 3-monooxygenase OS=Homo sapiens GN=KMO PE=1 SV=2  ali follow..  9  2....................................DSSVIQRKKVAVIGGGLVGSLQACFLAKR--NFQIDVYEAREDTRVATFTRGRSINLALSHRGRQALKAV-YPNVKMFNHRLLKCNPEEGMITVLVPKDVTCDLIVGCDGAYSTVRSHLMKKPRFDYSQQYIPHGYMELTIPPKNGDYAMEPNYLHIWPRNTFMMIALPNMNKSFTCTLFMPFEEFEKLLTSNDVVDFFQKYFPDAIPLIGEKLLVQDFFLLPAQPMISVKC------------------------------------------------------SSFHFKSHCVLLGDAAHAIVPFFGQAGFEDCLVFDELMDK........................................................................................ 333
31 -11.500sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2  ali   13  156...........QQFATEVFKAMSIPQIRNPSLPPPEKMSEAYSAKIALFGAGPASISCASFLARL-GYSDITIFEKQEY-----STSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLS----VNEMTLSTLKEKGYKAAFIGIGLPEKDAIFQGLT.................................................................................................................................................................................................................................................................................................... 298
32 -11.400sp|Q99518|FMO2_HUMAN Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Homo sapiens GN=FMO2 PE=1 SV=3  ali follow..  12  2..........................................AKKVAVIGAGVSGLISLKCCVDE--GLEPTCFERTED-IYQSVVTNTSKEMSCFSDFPMPED--LLKYIQF-QTTVLSVRKCPDKVVTQSNGKEQFDAVMVCSGHHIPLKSFPGMERFKGQYFHSRQYKHPDGFEGKRIL--------VIGMGNSGSDIAVELSKNAAQVFISTRHVKWMIEQQMNRWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKSTVKELTETSAIFEDGTVEENIDVIIFATGYSFSPFLEDSLVKVENNMVSL--IFPAHLDKSTLACIG--LIQPLGSIFPTAELQARWVTRVFKGLCS..................................................................................... 398
33 -11.400sp|P49326|FMO5_HUMAN Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Homo sapiens GN=FMO5 PE=2 SV=2  ali follow..  12  2.........................................TKKRIAVIGGGVSGLSSIKCCVEE--GLEPVCFERTDD-IYKSVIINTSKEMMCFSDYPIPDH--LLKYIRF-KTTVCSVKKQPDEVVTESEGKKEFDGVMVCTGHHLPLESFPGIEKFKGQYFHSRDYKNPEGFTGKRVI--------IIGIGNSGGDLAVEISQTAKQVFLSTRRANKYLEKKINQRFDHEMFGLKPKHRALSQHPTLNDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDPFLEDSVKVVKNKISLYKKVFPPNLERPTLAIIG--LIQPLGAIMPISELQGRWATQVFKGLKT..................................................................................... 398
34 -11.400sp|Q9UI17|M2GD_HUMAN(removed signalp:1-23) Dimethylglycine dehydrogenase, mitochondrial OS=Homo sapiens GN=DMGDH PE=1 SV=2  ali   14  7.......................CGREGEEKPPLSAETQWKDRAETVIIGGGCVGVSLAYHLAKA-GMKDVVLLEKSE----------LTAGSTWHAA-----------------GLTTYFHPGINLKKIHYDSIKLYEKLEEETGQVVGFHQPGSI----------------RLATTPVRVDEFKYQMTRTGWHATEQYLIEP--EKIQEMFPLLNMNKVLAGL----YNPGDGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTW----DVETPQGSMRANRIVNAAGFWAREVGKMIGLE............................................................................................................................................ 239
35 -11.300sp|P21397|AOFA_HUMAN Amine oxidase [flavin-containing] A OS=Homo sapiens GN=MAOA PE=1 SV=1  ali follow..  10  2...............................ENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEY--GVSVLVLEARDR-------DYVDVGGAYVGPTQNRILRLSKE----LGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKINVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIE----TLNHEHYECKVINAIPPTLTAKIHFRPELPAER......................................................................................................................................... 291
36 -11.300sp|Q96RQ9|OXLA_HUMAN(removed signalp:1-21) L-amino-acid oxidase OS=Homo sapiens GN=IL4I1 PE=1 SV=1  ali follow..  14  25.............................LKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDA--GHKVTILEADNRYRDQNTGWIGELGAMRMPSSHRILHKLCQGGLNLTK-----TQYDKNTWTEVHEVKLVVEKVPEKLGYALRPQEKGHSPEDIYQMALNQALKDLKALGCRKAMKKFERHTLLLGEGNLSRPAVQLLGDVMSEDGFFYLSFAEALRAHSCLSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMGPHDVHVQIETSPPARNLKVLKADVVLLTASGPAVKRITSPPLPRHMGGHSNTDRPSRMIFYPPSYTWSDAAA----AFAGLSREEALRLALDDVAALHGPVVRQ............................................................................... 412
37 -11.300sp|Q01740|FMO1_HUMAN Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Homo sapiens GN=FMO1 PE=2 SV=3  ali follow..  12  2..........................................AKRVAIVGAGVSGLASIKCCLEE--GLEPTCFERSDD-LYKSVVSNSCKEMSCYSDFPFPED--LLKHIQF-KTKVCSVTKCSVTMHEEKQESAIFDAVMVCTGFYLPLDSFPGINAFKGQYFHSRQYKHPDIFKDKRVL--------VIGMGNSGTDIAVEASHLAEKVFLSTTGVTWLMERKINNWLNHANYGLIPEDRTQLKEFVLNDELPGRIITGKVFIRPSIKEVKENSVIFNNTSKEEPIDIIVFATGYTFAPFLDESVVKVEDGQASLY-IFPAHLQKPTLAIIG--LIKPLGSMIPTGETQARWAVRVLKGVNK..................................................................................... 398
38 -11.200sp|Q9UL12|SARDH_HUMAN Sarcosine dehydrogenase, mitochondrial OS=Homo sapiens GN=SARDH PE=1 SV=1  ali   13  49.........................GQGTSVVAQGPSRPLPSTANVVVIGGGSLGCQTLYHLAKL-GMSGAVLLERER---LTSGTTWHTAGLLWQLRPSDVEVELLAHTRRVVSRELEE----------ETGLHTGWGGLFIAS----NRQRLDEYKRLMSLGKAYGVESHVLSPAETKTLYPLMNVDDLYGTLYVPHDGTMDPAGTC----------------------------------TTLARAASARGAQVIENCPVTGIRVWTDDFGVRRAGVETQHGSIQTPCVVNCAGVWASAVGRMAGVK............................................................................................................................................ 285
39 -11.200sp|Q8NCN5|PDPR_HUMAN Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial OS=Homo sapiens GN=PDPR PE=1 SV=2  ali   12  1MMFYRLLSIVGRQRASPGWQNWSSAR-NSTSAAEARSMALPTQAQVVICGGGITGTSVAYHLSKM-GWKDIVLLEQGR----------LAAGSTRFCA-----------------GILSTARHLTIEQKMADYSNKLYYQLEQETGIQTGYTRTGSI----------------FLAQTQDRLISLK--RINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAM----HVPEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVT----GVETDKGQIECQYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPLETPL...................................................................................................................... 277
40 -11.100sp|P31513|FMO3_HUMAN Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Homo sapiens GN=FMO3 PE=1 SV=5  ali follow..  10  2..........................................GKKVAIIGAGVSGLASIRSCLEE--GLEPTCFEKSND-IYKSVFSNSSKEMMCFPDFPFPDD--LLKYIQF-KTFVSSVNKHPTTERDGKKESAVFDAVMVCSG----HHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSSDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPNVKEFTETSAIFEDGTIFEGIDCVIFATGYSFAPFLDESIIKSRNNEIILFKGVF-LLEKSTIAVIG--FVQSLGAAIPTVDLQSRWAAQVIKGTCT..................................................................................... 398
41 -11.100sp|Q6QHF9|PAOX_HUMAN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens GN=PAOX PE=1 SV=3  ali   8  2..........................................VPSVGEYLKKEIGQHVARLCGHS-AFPHLRVLEATAR----------AGGRIRSERCF---GGVVEVGAHWIHGLGEKELSQENQLVETGGHVGLPSVSYASSGASVSLQLVAEMATLFYGLIDQTREFLHAAETPVPSVGEYLKKEIGQHVAGWTEDEETRKLKLAVLNSFFNLECCVSGTHSMDLVALA-FSKGYQGLTNCMMAALPEDTVVF--EKPVKTIHWNGSFQEAAFPVECEDGDRFPAHHVIVTVPLEHLDTFFDPPLPAEK......................................................................................................................................... 296
42 -11.100sp|Q8N2H3|PYRD2_HUMAN Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Homo sapiens GN=PYROXD2 PE=2 SV=2  ali follow..  10  11...................AVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRL--GVNTAVFERRHV----------IGGAAVTEEIIPGFKELKKHGLRLHLRNPYSFTPMLEEGAGSKVP----RCLLLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAGSLLQRMRSLSTLKPLLKAGRILGAQLPRYY-VLDQWFESEPLKATLATDAVIGAMTSPHTPALSDAIASSATTHGASIFTEKTVAKVQVNSEGCV--QGVVLEDGTEVRSKMVLTSPQITFLKLTPQEWLPEE.......................................................................................................................................... 360
43 -11.100sp|P31512|FMO4_HUMAN Dimethylaniline monooxygenase [N-oxide-forming] 4 OS=Homo sapiens GN=FMO4 PE=2 SV=3  ali follow..  11  2..........................................AKKVAVIGAGVSGLSSIKCCVDE--DLEPTCFERSDD-VYKSLVTNVCKEMSCYSDFPFHED--LLKYIQF-KTTVCSITKRPDDVVTETEGKQNFDAVMVCTGHHLPLEAFPGIHKFKGQILHSQEYKIPEGFQGKRVL--------VIGLGNTGGDIAVELSRTAAQVLLSTRTGTNWIQERKLNKRFNHEDYGLSITKGKKAKFIVNDELPNCILCGAITMKTSVIEFTETSAVFEDGTVEENIDVVIFTTGYTFSPFFEEPLKSLCTKKIFL--VFPLNLERATLAIIG--LIGLKGSILSGTELQARWVTRVFKGLCK..................................................................................... 397
44 -10.800sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2  ali   18  18............................KAGMCACHSPLPSIRGVVIVLGAGDTAFDCATSALR-CGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLSPRKVIVKGGIVAMQFVRTEQDETGKWNEDEDQMHLKADVVISAFGSVLSDPKVKE----------------------------------------------------------------------------------------------ALSPIKF-----------------------------------------------------NRWGLPEVDPETMQ-TSEAWVFAGGDVVG---ANTTVESVNDGKQASWYIHKYVQSQYGAS............................................................................... 214
45 -10.700sp|Q6NUM9|RETST_HUMAN(removed signalp:1-18) All-trans-retinol 13,14-reductase OS=Homo sapiens GN=RETSAT PE=2 SV=2  ali follow..  8  4...LGLFSGSSPNPFSEDVKRPPAPLVTDKEARKKSANQVPEKLDVVVIGSGFGGLAAAAILAKA--GKRVLVLEQHTKLEFDTGIHYI-GRMEEGSIGRFILDQITEGQLDWAP-----LSSPFDIMVLEGPNG---KEYPMYSGEKAYIQGLPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPVVQLLDRCGLLTRFSPFLQASTQSLAEVLQQLGASSELQAVLSYIFPTYGVTPEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKAC--GVSVKKGHELVN--------IYCPIVVSNAGLFNTYEHLLPGNARCLPGVKQQLGTVRPGLGM.............................................................................................................. 369
46 -10.600sp|P27338|AOFB_HUMAN Amine oxidase [flavin-containing] B OS=Homo sapiens GN=MAOB PE=1 SV=3  ali follow..  11  2........................................SNKCDVVVVGGGISGMAAAKLLHDS--GLNVVVLEARDR-------KYVDLGGSYVGPTQNRILRLAKE----LGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTELCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVE----TLNHEMYEAKVISAIPPTLGMKIHFNPPLPMMRGILTQYGRVLRQP-VDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDE............................................................................... 461
47 -10.500sp|Q8IWF2|FXRD2_HUMAN(removed signalp:1-26) FAD-dependent oxidoreductase domain-containing protein 2 OS=Homo sapiens GN=FOXRED2 PE=1 SV=1  ali   10  36.........................................VGQNVLILGRGNSAFETAENILGVTN--FIHMLSRSRVRLS-KSLDGLLESDLTDLAILKDSKGKFHVTPKFFLEEANTNQTLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAFG-----KKYPLIRASYESKGSRGLFIL--------------------------GTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSVTWPATELPITQLTSSIVRRVNEASGLYQMFGVDVILLKENSTAFEYLEEFPIQ............................................................................................................................................ 299
48 -10.400sp|Q96CU9|FXRD1_HUMAN FAD-dependent oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=FOXRED1 PE=1 SV=2  ali follow..  13  43......................SILPGRSCDLLQDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLRGAIRVLVVERDH--TYSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVD-----APPLDLRFGYLLLASEKDA-----------------------AAMESNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQG---------------LRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKARSLEYQPVECAIVINAAGAWSAQIAALAGVGEG.......................................................................................................................................... 307
49 -10.400sp|Q9Y2Z9|COQ6_HUMAN Ubiquinone biosynthesis monooxygenase COQ6 OS=Homo sapiens GN=COQ6 PE=1 SV=2  ali follow..  10  1........MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYHFHDKKILLLEAGPKKVLEDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQ--------------LPSGPIALLPLSDT-------LSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVL--------------FPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNGDISSLAHHLSTAAF..................................................................................... 398
50 -10.300sp|Q8NB78|KDM1B_HUMAN Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3  ali   14  56.........MTRKGLINTG-------VLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNF--GIKVTVLEAKDR----------IGGRVWDDKSFKGV--TVGRGAQIVNGCINNVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNAL.............................................................................................................................................................................................................................................................................................. 190
51 -10.300sp|O94851|MICA2_HUMAN Protein MICAL-2 OS=Homo sapiens GN=MICAL2 PE=1 SV=1  ali   14  73.............................GSHKEYKRGKSCTNTKCLIVGGGPCGLRTAIELAYL--GAKVVVVEKRDSFSRNNVLHLWPFTIHDLRGLGAKKKVALMLGVEIHVNEFVKVLEPPEDQENQSLSEFEFDVIIGADGRRNTLEGFRRKE.................................................................................................................................................................................................................................................................................................... 236
52 -10.200sp|Q7RTP6|MICA3_HUMAN Protein MICAL-3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2  ali   13  73.............................GSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLL--GAKVVVIEKRDAFSRNNVLHLWPFTIHDLRGLGAKKKVALILGIEIHVNEFQGLIQPPEDQENERISEYEFEVIIGGDGRRNTLEGFRRKE.................................................................................................................................................................................................................................................................................................... 236
53 -10.200sp|Q8TDZ2|MICA1_HUMAN NEDD9-interacting protein with calponin homology and LIM domains OS=Homo sapiens GN=MICAL1 PE=1 SV=2  ali   19  71.............................AGQPVYQQGRACTSTKCLVVGAGPCGLRVAVELALL--GARVVLVEKRTKFSRHNVLHLWPFTIHDLRALIRQLQLLLLKGVEIHWGTFTGLQPPPRKGSGAQLANYEFDVLISAAGGKFVPEGFKVRE.................................................................................................................................................................................................................................................................................................... 231
54 -10.000sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A PE=1 SV=2  ali   14  117...............................YKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDR----------VGGRVATFRKG---NYVADLGAMVVTGLGGNMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQAL................................................................................................................................................................................................................................................................... 262
55 -9.850sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2  ali   14  56..............................RWEGVNMERFAEEADVVIVGAGPAGLSAAVRLKQLAKDIRVCLVEKAAQ----IGAHTLSGACLDPGAFKE-GEQAEALGVEVYPGAAAEVLFHDDGSVKERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHT................................................................................................................................................................................................................................................................. 294
56 -9.570sp|Q8NE62|CHDH_HUMAN(removed signalp:1-15) Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2 SV=2  ali follow..  14  12.............................ARALASAGSESRDEYSYVVVGAGSAGCVLAGRLTED-PAERVLLLE---------------AGPKDVLAGSKRLSWKIHDRYNWCYHTEVQRGLDGRVLYWPRGRVWSLNAMVYVRGHAEDYER-QGARGWDYAHCLPYFRKAQGHELGASRYRG-ADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTENGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVEYVKNGQSHRAYAEVILSGGAINSPQLLMLSGIGNA----------------DDLKKLGIPVVCHLPGVGQNLQDHLEI............................................................................................... 325
57 -9.510sp|P50336|PPOX_HUMAN Protoporphyrinogen oxidase OS=Homo sapiens GN=PPOX PE=1 SV=1  ali follow..  13  2..........................................GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSER----------LGGWIRSVRGPNGA--IFELGPRGIRPAVSELGLDSEVLPVRGDHPAAQNRFLYVGGWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRG--VFAGNSRELSIRSCFPSLFQAEQTH-PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWK----VSLRDSSLEADVISAIPASVLSELLPAEA--------APLARALSAITAVSVAVVNQGAHLPVQGFGHLVPSSEDPGVLGIV......................................................................................... 347
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.