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Query: sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKPAFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYHLast
1 -5.630PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  18  258....FQPSDSLMTETLARVYVEQ-AKQAYRILSLKYPEKSGFFA--DQIRAIEKLQEN......................................................................................... 313
2 -4.280HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074;  ali follow..  1LLGITNDELGLSAQAARNLYAGKANAQVVNYLLE-SPRFLDLTYILEQYFNDTVAAGYAAQNQ----LYTTISSLTRKTVKTEAGEQAARDIAHLRTSVYQADLVTIENQFMLAVKE-VKKEIGNDFAAMQSMTAEAAKRMFTE... 147
3 -3.930HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  12  1....................................................................MSKKKRGEERMKEEDNILKKVG--KKNSFKVPEGYFENLTSEVMGKLPE.............................. 47
4 -3.800PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  26....AEFRPAELAGIWQLCHYVSEIPD--VPGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGGTYQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIGDDGVMYLK---YFIAKDLNGNELNTWFHETWKRV............. 151
5 -3.380HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  13  1MDMTDNNDDVLVKKFFSENRIDVPDDGFSRRVMRRLPDRTRRISRL..................................................................................................... 46
6 -3.330PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  52.LMLDDATAAKF-----------------------TPIYEKYLKELRECRMMNFKPRARKDAAQGTEANTAKETPKPVMTDIAKMLKDQFAQSRKMLDIREKYYNEFSKILIYQQEKSNMNKFRKEFDR.................. 165
7 -3.310PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;  ali follow..  12  99LYNDGVRIFLTLGKLGKAIQNNPQGIVASMNMNNLYIETATELVSVFTLLNDAVAKGSNENMLTGAERSKTLWALNDQLSDFSRKLHLL------YLSIRYYTFNDVWNNVTAGMLDRDNGEAARMALSHWHRAAALV......... 230
8 -3.050PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  10  117....NEHIQEIIETGFDWLITPQYTMNTLYLFGLENDWVHPELKHLIETKIIH---ESKGTKARGKHILNLIEKHQKS..................................................................... 193
9 -2.920PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  10  1.MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIDDFMENVKPNLKSTLCRMKD-AGDFDKVTILKPYSFVLVDEDKETVAELLLLLVDDELLKGLDKELDEFLKNLLE........... 147
10 -2.910PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  17  6..........................NFLDAMFAPYPASTRL-TDAKVELRAMMEDAYADAIASGMTHNEAVGRVITDFGNLQEIAPVL.......................................................... 67

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.