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Query: sp|P56385|ATP5I_HUMAN ATP synthase subunit e, mitochondrial OS=Homo sapiens GN=ATP5I PE=1 SV=2, from H.sapiens

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .
# Score Template Links and tools%idFirst MVPPVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARELAEDDSILKLast
1 -6.940HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679;  ali follow..  15  135................RMLLVKVTYGMDFGRKRKTAAKRIQNEDTDTGILKGNK............... 172
2 -3.550HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;  ali follow..  17  98.....................GVSPGESERGLMDPEDTRTMFLRKEEQMLQHDKKNNKTSSTNKKQ... 145
3 -3.490PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  8  37....AMITPAVLISGAGTLIMSTS------TRVGRATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLII 95
4 -2.990PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  26  1MDPPV-CSPWGRFGCYLLLFA-IIFASIMKKEFIGRTAKSLSLALA....................... 46
5 -2.750PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  12  3...........TVFNIVLVLCAAALIYICYSSIKAKKEREQAVIARLIDIRKAQQEYRSLHHGMDTLID 72
6 -2.610PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]  ali follow..  11  1......MKRIVSMMVIFTLLLGGMTHVQAQTSKAAXXXXXXXXXXXXXXXRLAKDAVMGEEAFNN.... 59
7 -2.230HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  7  17...........................VETQLAQEQHKLKRLENRKKYLEKGERQKRTHRLCNLGGTIE 58
8 -2.210PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  15  103....VYPSDIKKIIQW--------YNILAEKVPQVFKAETAEEESQEEVAVKEETSSD........... 148
9 -1.870PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  15  150............................HEKSLSKAVRAVVE-SKAAKRLDDAKTNLTAKLDEASKLLA 189
10 -1.840PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  10  139LTGTKSNGFTILEFMYCIIIIGILFNHFGKKRLSVDPTPMEEMRLYENDIQTTLVETYSRKEKELDV.. 209
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.